Array 1 860040-859408 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP068104.1 Pediococcus pentosaceus strain FDAARGOS_1134 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    860039	    36	 100.0	    30	....................................	TACGTTTGATATATCCTAACTCTGCAGCTT	
    859973	    36	 100.0	    30	....................................	ACAGCCAAAGCACATAACGATAGAATCGCA	
    859907	    36	 100.0	    30	....................................	TTCAATTGTCACTGCAGCAACAGGAGTGTG	
    859841	    36	 100.0	    30	....................................	GATGGAAAGCTGTGGCAGTAATTCATGAAC	
    859775	    36	 100.0	    30	....................................	AATAAAAAAACCTCCATCCGAAGACAGAGG	
    859709	    36	 100.0	    30	....................................	AAAAGAACAACTGAGTAGCCTCCCAGGGCT	
    859643	    36	 100.0	    30	....................................	TAAATTTCGCCATTAAGCTTCCTCCAGTTC	
    859577	    36	  94.4	    30	...........A...............C........	TTCTGCCGGCGGAATCCACTAAATTTGTTT	
    859511	    36	  97.2	    30	...........A........................	TGCGACCATCGCTATACATAAGCATATTTG	
    859445	    36	  88.9	     0	......................G.....AA..T...	|                             	CC [859417]
==========	======	======	======	====================================	==============================	==================
        10	    36	  98.0	    30	GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC	                              	       

# Left flank :   CAGAATTTAGTTTTAACAAAGTATTTGCGCCAAATTGAAAAGTTATTTTTACAGTCTGTTACAGATGAACAACAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCTGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACGATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGTGTTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAATTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAACTTCTATAGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAACG
# Right flank :  AAACTGTACCCCGCAACAGCTTAGCCAGCTGTTACAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAATTAAAAAGAATCATTTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGACCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATGTGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATTGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATTGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACTAAAGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATC

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.68   Confidence: HIGH] 

# Array family : NA
//