Array 1 860040-859408 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068104.1 Pediococcus pentosaceus strain FDAARGOS_1134 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 860039 36 100.0 30 .................................... TACGTTTGATATATCCTAACTCTGCAGCTT 859973 36 100.0 30 .................................... ACAGCCAAAGCACATAACGATAGAATCGCA 859907 36 100.0 30 .................................... TTCAATTGTCACTGCAGCAACAGGAGTGTG 859841 36 100.0 30 .................................... GATGGAAAGCTGTGGCAGTAATTCATGAAC 859775 36 100.0 30 .................................... AATAAAAAAACCTCCATCCGAAGACAGAGG 859709 36 100.0 30 .................................... AAAAGAACAACTGAGTAGCCTCCCAGGGCT 859643 36 100.0 30 .................................... TAAATTTCGCCATTAAGCTTCCTCCAGTTC 859577 36 94.4 30 ...........A...............C........ TTCTGCCGGCGGAATCCACTAAATTTGTTT 859511 36 97.2 30 ...........A........................ TGCGACCATCGCTATACATAAGCATATTTG 859445 36 88.9 0 ......................G.....AA..T... | CC [859417] ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.0 30 GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAGTATTTGCGCCAAATTGAAAAGTTATTTTTACAGTCTGTTACAGATGAACAACAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCTGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACGATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGTGTTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAATTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAACTTCTATAGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAACG # Right flank : AAACTGTACCCCGCAACAGCTTAGCCAGCTGTTACAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAATTAAAAAGAATCATTTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGACCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATGTGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATTGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATTGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACTAAAGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //