Array 1 93768-92580 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAINTF010000018.1 Escherichia coli strain S130-6 NODE_18_length_95606_cov_48.650960, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     93767	    29	 100.0	    32	.............................	TACTGGAAAAAGCTGGCGACGGTGAGCGCAGC	
     93706	    29	 100.0	    32	.............................	GGCACGGAATTGTTATGCTGTTCCCCTGACCG	
     93645	    29	 100.0	    32	.............................	ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG	
     93584	    29	 100.0	    32	.............................	GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA	
     93523	    29	 100.0	    32	.............................	GGACAATGTGAAAAGCTTAATATTCATTACAT	
     93462	    29	 100.0	    32	.............................	CGACGTTTTCTAATATCACCCAGCAATCAATT	
     93401	    29	 100.0	    32	.............................	ATTTCATCAAAGCATTAAGGGATGGAATAAAG	
     93340	    29	 100.0	    32	.............................	TCATGAATATGGGGAAAACGAACAATCTGTTT	
     93279	    29	 100.0	    32	.............................	ATGACCATTGGTGAACGCATCCGCTTTCGCCG	
     93218	    29	 100.0	    32	.............................	CCGACGTGGGGATTTACTGCCACGCATAAAAA	
     93157	    29	 100.0	    32	.............................	AGGACGAAACGACCGGAAAACTGGCGACGGGC	
     93096	    29	 100.0	    32	.............................	CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT	
     93035	    29	 100.0	    32	.............................	AACCTTGTCGGGTCGCCCGTGCGTCATGATGA	
     92974	    29	 100.0	    32	.............................	AGTTCCCACAAACCTGGGTGCATCTCGCGTTC	
     92913	    29	 100.0	    32	.............................	ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA	
     92852	    29	 100.0	    32	.............................	CCAGCCGAAACAACGCCAGCAAAATCGACCGC	
     92791	    29	 100.0	    32	.............................	GGATATAGAGCGGGTACTCGAGCGAAGCGGGG	
     92730	    29	 100.0	    32	.............................	CCAGGACAGGCCGTGACGGTTGCCATTGAGTC	
     92669	    29	 100.0	    32	.............................	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA	
     92608	    29	  93.1	     0	............T.....A..........	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  99.7	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [41.7-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//