Array 1 15912-15149 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CZJN01000005.1 Campylobacter jejuni strain Campylobacter jejuni isolate WATER, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     15911	    36	  97.2	    30	T...................................	CAAATGTTAAAACAATACGAGCAAATGATT 	
     15845	    36	 100.0	    30	....................................	TTATTTTTGTCGCTAATTGCACCTAAAGAC 	
     15779	    36	 100.0	    30	....................................	AAATTTACAGCACAAAATAAAGATTTTAAT 	
     15713	    36	 100.0	    30	....................................	TTTTGTTGAGTGGGTTATGAGCCAAAAGAA 	
     15647	    36	 100.0	    30	....................................	TAATAATGCTTTTAATTTGAAAGATGAGTA 	
     15581	    36	 100.0	    30	....................................	TGAGATAGGAAATGTTAATGCTGGAAATTC 	
     15515	    36	 100.0	    31	....................................	AGAAAGTAATTTATTTATAGATTTACCACAC	
     15448	    36	 100.0	    30	....................................	AAAAGTTTCTTGCGTAAAAACATTTAAGTT 	
     15382	    36	 100.0	    30	....................................	ACAAGACAATTTATTAAAAATAGTAATGAA 	
     15316	    36	 100.0	    30	....................................	ATAGCGATGGTAATTGGCTTGCAAATATAG 	
     15250	    36	 100.0	    30	....................................	TATAAAAATATGAAAATAGTATCTTATGCA 	
     15184	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        12	    36	  99.8	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                               	       

# Left flank :   ACATAAAACCAGGCAGACATATCAAAATAGCCAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAACTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGCTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGTAATGTGGAATTTAAAAATGGACGCATTTTAGCTAATCTTGAAGGTAAAAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTAGTACCAAAAGAATGTGAAATGTTAGAAAATGAAAGCTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTTGCAACCTCCTTTTAGTGGAGTAATTAGCCCTAGCGGAGTTTCAATCCACTAGGGT
# Right flank :  AGATATTTACCAGATAATGAAAATTTCGGGGTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCCGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAATTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACACTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTATTTCTAAATTTACTTGC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:77.78%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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