Array 1 1658-6545 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIJK01000046.1 Shewanella indica strain KJW27 scaffold19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1658 28 100.0 32 ............................ TGTAAGCGCGTCAACAAGGTTGCGGCGTTCAG 1718 28 100.0 32 ............................ GCTTTCTGGCAGAACTACAGGCTCAGAAGTGT 1778 28 100.0 32 ............................ ATTTCAAGAGGGCAGTCGCCTCGGTAGCTTGA 1838 28 100.0 32 ............................ TTGTCGCTGGCTGAGTGCCAGGTACTTAATTT 1898 28 100.0 32 ............................ ATCATTAAGAATGCTTTTGCCGTTCTCAAGAG 1958 28 100.0 32 ............................ TGGCTGTAGCTCAGGAGCGTCTGTCAGGGTTA 2018 28 100.0 32 ............................ AATCACCAGCCATCCGATAAACTTCTCCTTGG 2078 28 100.0 32 ............................ TTATAGGCGGCGCTATACTTGCGAAGGTGAAG 2138 28 100.0 32 ............................ ATTGTTTGAACGTTCTTAGCTAGCAAGATGTT 2198 28 100.0 32 ............................ TCGGCGCGCTTTTGTGTGTGCTCCATTGTTTG 2258 28 100.0 32 ............................ GGATGCAGCAGTTTGCGACTTAACACGCTTGC 2318 28 100.0 32 ............................ TGTTTGACGCATCAAAAACAGGCAATCTTGAA 2378 28 100.0 32 ............................ TACTGAAGGATATTGTCTCGATTATACCGCTC 2438 28 100.0 32 ............................ AGCACCCTAATCTTGCGAAGGCTGGCCTCAAC 2498 28 100.0 32 ............................ ATAATTTCAGGCCTGAATCCACTCACTTTTTA 2558 28 100.0 32 ............................ ATCCTTACGCACTTCGTTTGGCTCTGCATCAT 2618 28 100.0 32 ............................ AAACTCTGGCAGTAGAAACTTACTCGCTGTAA 2678 28 100.0 32 ............................ TTGATGCGCTTAAACCCCTTGCCAGTTCTGAC 2738 28 100.0 32 ............................ ATTACAACGCCGTGAGGCGTAGGAGTTTATAC 2798 28 100.0 32 ............................ TCTTGTCTTGATGGTTCGCTCGATTGTTTCTT 2858 28 100.0 32 ............................ GACCTGACGAATTCAGGCTGAACTCCGTTAGC 2918 28 100.0 32 ............................ ATTACAACGCCGTGAGGCGTAGGAGTTTATAC 2978 28 100.0 32 ............................ TCTTGTCTTGATGGTTCGCTCGATTGTTTCTT 3038 28 100.0 32 ............................ GACCTGACGAATTCAGGCTGAACTCCGTTAGC 3098 28 100.0 32 ............................ ATTACAACGCCGTGAGGCGTAGGAGTTTATAC 3158 28 100.0 32 ............................ ATCGGCGCGCATAGCCTCAATCTCACGCCACT 3218 28 100.0 32 ............................ TGCGAGATGCCACAGAGAGAGCTGTCAATGGT 3278 28 100.0 32 ............................ TGTCTGAACCAGCTAGCTCTGTTTCGTCCCAG 3338 28 100.0 32 ............................ TATTAAATCACCATCTTAAAATGCCCCAGTCT 3398 28 100.0 32 ............................ ATGCCAGAGGTCTGGAAAACTTCTTTACCATC 3458 28 100.0 32 ............................ TCTCGCGTATTTAACGATATGCGCGGACTAAG 3518 28 100.0 32 ............................ ATCAACCTATTACCTTATCTATTGCACTGTAG 3578 28 100.0 32 ............................ TGAAAGCCAGCGATTTGATTTAACGATTGATG 3638 28 100.0 32 ............................ TCAGACTGCGCTTTACCCGCGCATTCGCGACC 3698 28 100.0 32 ............................ ACAAATGACTTGCAAAATTCATACACATCTGA 3758 28 100.0 32 ............................ ATTAGCAACGGTAACTGAAACCGGATCAACTG 3818 28 100.0 32 ............................ TTGGTTGCCACTCATACTGGTAGAGCCGTTTT 3878 28 100.0 32 ............................ AAAAGTAAACGAAATTGTTATTGAGGACGGAG 3938 28 100.0 32 ............................ ATTACAACGCCGTGAGGCGTAGGAGTTTTATA 3998 28 100.0 32 ............................ CTCTTCTAGCGCAACAGGGAACCCGGTAAACC 4058 28 100.0 32 ............................ ACATGGTTGCGTAGCCTTTGGCAGTCATCATA 4118 28 100.0 32 ............................ CACAGGGAAGCCGCCCACAACAGCGTCAACAT 4178 28 100.0 32 ............................ GACGAAGAAAAGAAAGCCAAGGACAAGAAAGA 4238 28 100.0 32 ............................ AGAATATGCAGGAGTATTTGACATGCCGTTGT 4298 28 100.0 32 ............................ GCTATTATCTGCGGGAGAGCCGACAAAGAAGG 4358 28 100.0 32 ............................ TCCTCGTCACGTTCAAACGTGATGATCTTCAT 4418 28 100.0 32 ............................ GATTGGCATCACAGTTCCCGGTAATACGCCTT 4478 28 100.0 32 ............................ ACTTCCGCCACATAAACCTTCCCATCATACTC 4538 28 100.0 32 ............................ TCATAGCTGCATAGTATGACCTGGCTGGCAGT 4598 28 100.0 32 ............................ TTTCGTGGTGCCAGACGCAGTACTCTATTGCT 4658 28 100.0 32 ............................ CTATCTTTCCAGAGTCAAGACGGAATCACCTC 4718 28 100.0 32 ............................ ACGTATTGCAACAGGAAATCGGCTTTCTGCTG 4778 28 100.0 32 ............................ AAATTCGTCCTTGTTTTGCGGGTCAAGGATTT 4838 28 100.0 32 ............................ TGTATATCCCTGTGAAGCTCGACAATAGACCT 4898 28 100.0 32 ............................ TATCTCGGGAAGTTTAATACCACCATGATTAC 4958 28 100.0 32 ............................ ATTAGTTTAACACCTTCCCGATTGCACTATAG 5018 28 100.0 32 ............................ TGACTGGCTCACCGTATCGAGGGATACAGTCA 5078 28 100.0 32 ............................ GTTGTATTCAAACTCTCGCACTCCAACTATAA 5138 28 100.0 32 ............................ GATATTTCACACCAAGGACGACCTGAGTCAGT 5198 28 100.0 32 ............................ TTGCCATTTCTGGCTCAATGGATGGTGTTTAT 5258 28 100.0 32 ............................ ACCACGCCACGCATTAAACAACTGAGCCGCTT 5318 28 100.0 32 ............................ ATTAGTTTAACACCTTCCCGATTGCACTATAG 5378 28 100.0 32 ............................ TGACTGGCTCACCGTATCGAGGGATACAGTCA 5438 28 100.0 32 ............................ GATATTTCACACCAAGGACGACCTGAGTCAGT 5498 28 100.0 32 ............................ TTGCCATTTCTGGCTCAATGGATGGTGTTTAT 5558 28 100.0 32 ............................ ACCACGCCACGCATTAAACAACTGAGCCGCTT 5618 28 100.0 32 ............................ ATTAGTTTAACACCTTCCCGATTGCACTATAG 5678 28 100.0 32 ............................ TGACTGGCTCACCGTATCGAGGGATACAGTCA 5738 28 100.0 32 ............................ GATATTTCACACCAAGGACGACCTGAGTCAGT 5798 28 100.0 32 ............................ TTGCCATTTCTGGCTCAATGGATGGTGTTTAT 5858 28 100.0 32 ............................ ACCACGCCACGCATTAAACAACTGAGCCGCTT 5918 28 100.0 32 ............................ ATTAGTTTAACACCTTCCCGATTGCACTATAG 5978 28 100.0 32 ............................ TGACTGGCTCACCGTATCGAGGGATACAGTCA 6038 28 100.0 32 ............................ GTTGTATTCAAACTCTCGCACTCCAACTATAA 6098 28 100.0 32 ............................ GATATTTCACACCAAGGACGACCTGAGTCAGT 6158 28 100.0 32 ............................ TTGCCATTTCTGGCTCAATGGATGGTGTTTAT 6218 28 100.0 32 ............................ GCCTGTTGGGTCGAAAATGGTCATGTACAGAA 6278 28 100.0 32 ............................ TGTTATCAACATGGCCTGTGCCGTGTTGGCCC 6338 28 100.0 32 ............................ ATCTTGAACTCACCAGCATCAGACAGCGGAGC 6398 28 100.0 32 ............................ TGCTGGACGGCGAAGTCTCGGCGCTCACCATC 6458 28 100.0 32 ............................ ATACGGATATCGTGGGCTCAATCCGCAAGATC 6518 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 82 28 100.0 32 GTTCACTGCCGCCCAGGCAGCTTAGAAA # Left flank : CGAGTGATGTTTCCTACGTGAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATCGAAAGATATCCGCAAAGTACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTGAGTCGTAAAGTCAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTAGTATTCAACAGGGTAAAAATAGGTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGCTTTATTCTATT # Right flank : AGTTCTTCTGGTGATGACCTTTCCCCCGAATTTATCACTCGGCCCCAGCAATATCCGAATTTCCTGCATTTGTGGGGCTGAAGAGGTCGAAACTGAGGAGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTAGCTAACCGCGACTCTTTGGCTGCAGGCGACCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCCCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //