Array 1 107009-110340 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTWT01000008.1 Ruminococcus sp. AF18-29 AF18-29.Scaf8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 107009 32 100.0 34 ................................ TTGCCTTATACTGTTGTAAAAAATACATGGACCT 107075 32 100.0 34 ................................ AATCAGCACCACTGCCAAAAGAAAACCGGTGTGC 107141 32 100.0 34 ................................ CTCTCAGCTCCGCAGGTTCTCCAACTGTCGCACA 107207 32 100.0 34 ................................ AAACCTTAAGCAGGTCTGTGAGAAAATGCCAGAC 107273 32 100.0 34 ................................ ATTTTTTTACTTTGGCTTTTTACTGCCGTTTTCC 107339 32 100.0 34 ................................ ATTTCGTCCAAACGGCTGGTGTTATATGATAGAG 107405 32 100.0 35 ................................ TCTCAATGAAGATGTGCTAGAGGAGCATTTCGACG 107472 32 100.0 33 ................................ AGGTACTGGAGCAACAACGCAACATACGGAGCG 107537 32 100.0 34 ................................ TGTAGAGGGATATTTCAGCAATAACATAGCCCTC 107603 32 100.0 35 ................................ GTTTTAGAGCCCCCACCGTCAGTAAGTGTGTTGAG 107670 32 100.0 34 ................................ CTACAACCTTTGTGTGAAAGTCCGAAACAACATC 107736 32 100.0 33 ................................ TGCTAGCTTTCTGTTTGTGATTTTGCGCATTCG 107801 32 100.0 35 ................................ GAGCAACTATATATACGGAACAACTGAGGGTCGCG 107868 32 100.0 35 ................................ ACCGCCGCCACGACACGGCGCAAGCGGTCTTTCGG 107935 32 100.0 34 ................................ GACAGGCGTACTCGTACATATCGTCGAAAATGCA 108001 32 100.0 34 ................................ TTCTTCTTTCGACTAGAAGAACGTGGGCAGGCAT 108067 32 100.0 34 ................................ GACGAAGAAGAGATTGACAAGATAAGGCTGTCTG 108133 32 100.0 35 ................................ CTTTAATTTGTCTAGCCTTGCCTGTGCTGTTATCG 108200 32 100.0 34 ................................ CAGCTTCTCGACGATTCTCTGCATGGTTGTTGAC 108266 32 100.0 34 ................................ AGCAGACCTTGCGATTTCCACAATTCATACGGCA 108332 32 100.0 34 ................................ TCAGATCATCAGCGACCTGTTTTGCCAGTTTGCT 108398 32 100.0 35 ................................ TCGGTGCGCTGTGACCTTGTGGGCTATGCTGATAG 108465 32 100.0 33 ................................ TGTCTAGCCGTTCTTTGACTAGGCCGTGAACCT 108530 32 100.0 34 ................................ GTTCAAATTCTTTTTGATTTTTGCCATTATCAGA 108596 32 100.0 34 ................................ TTTGAAACAGCTCCAGCTTCAACGGCTGACCTAG 108662 32 100.0 35 ................................ CTTTTTTTGTTCCGGCCGTGAACGATTTCTGTTTT 108729 32 100.0 34 ................................ ATCAACTTCTTTGCCGGTGCACCATGTAAGCCCC 108795 32 100.0 33 ................................ TTAGGAAATTTTACTGCATTTTTTGGCGAAATA 108860 32 100.0 34 ................................ ACCCCCCTAACTAAAAAGTCACTGTAATATTTAG 108926 32 100.0 34 ................................ CAAGGAGTGAGCGTCCACATACATTCTTCAAACA 108992 32 100.0 34 ................................ TGCACATATCATGGTGCTAGGCGTAAGAACTAAC 109058 32 100.0 34 ................................ TGATGATAACACAAAAAGGCATATTTGTCAAGCA 109124 32 100.0 35 ................................ ACCTAATAAATGGGAGTTGATATAAATGCCCCTAG 109191 32 100.0 34 ................................ TGTACAGACATCGCATATATATTCCTCCTATCGC 109257 32 100.0 34 ................................ TAAGTCTTTGATAATAATTAATAAAAATCGCCTC 109323 32 100.0 35 ................................ TATATCAAGATTTATATTATTATTTTCAGCTGCTA 109390 32 100.0 34 ................................ GTTGATATTACTGTAATCAATGCAGACGGAACAC 109456 32 100.0 34 ................................ TGTGACGTAAAAAGCTAGGTTTGACATCTGTCCG 109522 32 100.0 33 ................................ CTACCGGCGATGCTTTTTGAGTTGCATTTAAAG 109587 32 100.0 33 ................................ CAAGCACAGAAGCTTCGGCAACTACCACAACGG 109652 32 100.0 33 ................................ TAATCAGATAACAGAAATGTCAGATACAAACAA 109717 32 100.0 34 ................................ CATCATTCTATTTGCTAGGGTCAGTTGCACAAAG 109783 32 100.0 34 ................................ GCAAAACGGCAATGACTATACAGAGGTGCGACTA 109849 32 100.0 33 ................................ GACGGAATAGATTTTAATACCGTGAAAACCGTA 109914 32 100.0 33 ................................ AATAAAGGAGTGAGAAAATGAAAATATCTAAGC 109979 32 100.0 33 ................................ AACACCAGTAAGACCAGCAGAGATTGTGCCAGT 110044 32 100.0 34 ................................ GTGTGCGAATGCCGTTGGCAGATCATTCCGAGAG 110110 32 100.0 35 ................................ AAAGCAGATTGTTACAGTAAATGCCGACCCCGAAA 110177 32 100.0 35 ................................ AACATCATTTGTGAGAGACGGAACCTTATTTGTAG 110244 32 100.0 33 ................................ ACCGCTGAGCAACAGGAAACAGTGCTTAAACAG 110309 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 51 32 100.0 34 GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Left flank : GGCGAGCTAGATGAGTACCCGAACTATTTGCTGAAATAGAGGTGATATAAATGATGACCTTAGTAAGCTATGATGTATCAACAACAGATAATAAGGGTAAAACAAGGCTTAGAAAAGTAGCCAAAGAGTGTCAAAATTATGGTCAGCGAGTGCAGAACAGCGTGTTTGAAATAGACGTAGACTATGGCACTTTTCTGAAAGTGAAAGATAAACTTCTGAAAATAATAGACCCAAAGCATGATAGTCTGCGGATATATTACTTAGGAAACAATTGGAAGCATAGAATAGAACACTACGGCACCAAAGAGACCTATGACCCCGAAGGCGTCCTAATATTTTGACCAGCGTACCCCAAGTGATCCACAAATCCCTAGTAAGTTCGCATGAAAATGCCATGCTATATGTGAATGAACAGTGAACAAAATCAAACCGATACCCATTAAATAAAACAATAAGTCCGCATCACGTTGAGCAAGCACCAGATATACACAACATCAAGG # Right flank : TATGATAATGTAAAAAAAGAGAGGTATCATGCAATGATTAAATTATTTTTGAAAGAATACTTAGATGAAATGTCAACTGTATGTAGGGATAATAAGAATAATGTAAGTATCGCTGTAAATCCCGATTCTGAAAGGCAGGGACATCCTTATTTCAAATTTTATAATAACGTTTATTATGGAGATGCTGCTAAGGTGGTTAGAATTTTATTTAATTCAGCAGATTATGTTGAAAATAAAAATGCAGAAGACCAAAAGCTTTGGAAACTTTCGCATAAAGAAAAAAAGTTGCTTAAAGAACTTTTGAGTAGTCCTTCTGCAGAATATTCAGATATGACTATTTGGGAAGCTTGTAAATTTGAGTGGAACTTTGAATATTTAGAGCAATCTATTAACTTAAATAAATATGTAAATGGTGAATATGATAAGGATAAAACATTCACAGAAAATCCTGGCTATGTACCCTACAGTTTGGAAATGCCTGATTATTTAGAATTAAACTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //