Array 1 72614-77806 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSOC01000006.1 Azoarcus nasutitermitis strain CC-YHH838 contig06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================ ================== 72614 28 100.0 32 ............................ TCCACCAGGTTGCGGCCCTGATGGGGCTCTCA 72674 28 100.0 32 ............................ AGTCTGAGCAGCAGTTGAAACCAGGCTGCCCG 72734 28 100.0 32 ............................ TTCTTGGGCAACAGCGAACAGTTGCCCACGCA 72794 28 100.0 32 ............................ AGGAGCCGCAAGGCTGCGGCCGAAGCCGGGGC 72854 28 100.0 32 ............................ TGTGGCAGCTCATCGTGCGCAGCAAGCAGCCC 72914 28 100.0 32 ............................ ACGTTGCGGTAAAGCAGTCCGCCAGCCATGTC 72974 28 100.0 32 ............................ CAAGATCAATCTCCATTTCAGGGCTCCTCGCT 73034 28 100.0 32 ............................ GGCGTGGCCTGGAAGGATCACCGCTGCGCGAC 73094 28 100.0 32 ............................ AAGTGGCTGCGTACGTCTTCGCCATCCAGGGA 73154 28 100.0 33 ............................ CTCGCGGCGATGGCGACTCATTCCCCACCAGAC 73215 28 100.0 32 ............................ TGGACGTGGCGCAAGCTCACGCGAGTGATCTG 73275 28 100.0 32 ............................ TTCGATCCTGGCAAAAAGGTGCTCAGGGCTGG 73335 28 100.0 32 ............................ TGCGAAGGAGTGATCGTGTCGATGTTTGTGGT 73395 28 100.0 32 ............................ TGATCTGGTGCCTGCCGTCGGGCTTCGGGAAC 73455 28 100.0 32 ............................ TGGTCTCGCCGCCGGCTCTCGGCCTCATACTG 73515 28 100.0 32 ............................ TGATCGCCCTGGGTATTTCTGTGCGCACTCAA 73575 28 100.0 32 ............................ TCGGGTCGATCTGCGGACGGCTCGACAGCTTC 73635 28 100.0 32 ............................ TTCTCGGCTTCGGTCATCTCTCCATGGACGTC 73695 28 100.0 33 ............................ CGAAATGGAGGCGGCATGAGCACCATTCTCCAC 73756 28 100.0 32 ............................ TTCACGGCCTCCATGAGTACGCTGCCCTTGGG 73816 28 100.0 32 ............................ GAAACGATTACGCGCCGGACGACGACGCCGAT 73876 28 100.0 32 ............................ AGGAGCAGCAGGGAATCATGATGCTGAGCGGC 73936 28 100.0 32 ............................ TTCAGCGCGCGCCGGCCGGTGGCCGGGTCGCG 73996 28 100.0 32 ............................ TGCCCCTAAAAAACTGATCGAGGCCGCCCGGC 74056 28 100.0 32 ............................ ATCACGGATGCACCGTTGCCCACGGTGAACCT 74116 28 100.0 33 ............................ GGCACGCCCTTGATGGTGTCCAGGTCGCCCACC 74177 28 100.0 32 ............................ ACGCCGGGAATGCGGCCCTGGTGGCGGAAAGG 74237 28 100.0 32 ............................ ACCCCCCCCAGTCGGCCGGCGCGCTCGAAACC 74297 28 100.0 32 ............................ GGGCACAAGCAGTACCGCTCCGCCGTCGCCGA 74357 28 100.0 32 ............................ GTAGCCGCTCGATCCGATCTGCGCGCCGTAGC 74417 28 100.0 32 ............................ TGCCCGCGCCAGCGAGGTACTGCAACTGCTGC 74477 28 100.0 32 ............................ ATTGAGCCGCCGCGGCGCCGGCCGCGAGTCTC 74537 28 100.0 32 ............................ ATGCGGGGTGGGCGGCGGGCGGCGGCGAGAAT 74597 28 100.0 32 ............................ CTCGGGGATGATCAGGTCGGGGGCGTTCATGA 74657 28 100.0 32 ............................ GCCTCGGCCTGGGCGATCTGCCGCCCAGCACG 74717 28 100.0 32 ............................ CGTACGCGCCGCCGGCCAGGCCGCCAGCACGG 74777 28 100.0 32 ............................ CTGGCCGAACAGATCGAACGCGACGGCTGGAT 74837 28 100.0 32 ............................ CTATACCGGAGACGGGTTCAGCGCGATGTGGC 74897 28 100.0 32 ............................ TACCGCCTCGCCCGCGACCGCCTGCTTTCCGT 74957 28 100.0 32 ............................ TTCTGCTGGGAAGTCGCTGACGGACGCGCTGC 75017 28 100.0 32 ............................ TACTCCAGTTGCGGCCCGAACGACTTGGCGCT 75077 28 100.0 32 ............................ GCGCTGGCCGAGTCCGTCTCCAACCGCGAGCA 75137 28 100.0 32 ............................ TTTTTGCCAGGATCGAAGGCGAACGGACCGGA 75197 28 100.0 32 ............................ TGGCCGTGCTGGAACTGATTGCCCAGGTGTGG 75257 28 100.0 32 ............................ AAGCCGAACTGGTTGGCGCTGACCTTCTCCGC 75317 28 100.0 32 ............................ AAAGGAAAGCACGGCCCCGCACGAACACTGCG 75377 28 100.0 32 ............................ AGGGGTTTTCCTCCTCTTCCCCCGGGTGCTTC 75437 28 100.0 32 ............................ GACAAGACGGAACGCGCCGGCCGCGCGCACAC 75497 28 100.0 32 ............................ TCGCAATACTCCCCGCCCTGCGGGAATTTCTT 75557 28 100.0 32 ............................ TTCAGAACCTCGACCTCCAGCTTCGTCTGTTC 75617 28 100.0 32 ............................ CAGGCCGGGCTGTCCAGTGCCACGCCCGGCGC 75677 28 100.0 32 ............................ GTCAGCGCCACCCCGCGAGCGGGTGGCACCCC 75737 28 100.0 32 ............................ TACCGGGCGTATCTCTCCACCGATCTATCCGG 75797 28 100.0 32 ............................ GCTGAGCCGGCGTGAACTGCTGAAGTTCGCCG 75857 28 100.0 32 ............................ CGAGCATCGCCACCATGCCTGAGCAACGCCTG 75917 28 100.0 32 ............................ GGCTGCACCCGCCGCGACTACGTGCCCGTCCA 75977 28 100.0 32 ............................ ATGTAGCCCACGACCTCCGGCGCCAGGTTGTC 76037 28 100.0 32 ............................ TTCTTTCCCAGTCGCGGAACAGTTCGTGGTCG 76097 28 100.0 32 ............................ TGGAGGCGGACGGCCTGGCGCGCCACGAACAG 76157 28 100.0 32 ............................ TCACGCCGGCCGCCCGCGCGGAATACACGCTC 76217 28 100.0 32 ............................ TTTTTCGCGGGGGCAGGGGAGTCGGTAACGAG 76277 28 100.0 32 ............................ GTCTCGGACACCGTGGTGCCCAACAGCGTGGC 76337 28 100.0 32 ............................ TGTCGGCGAATCTCTTGTGCGTGCCCTGCAGC 76397 28 100.0 32 ............................ TGAAGGAAGAGAAAACCGGCCGCGACTTCAAG 76457 28 100.0 32 ............................ GCCCTGCGGAGTGCCGCCGACCTCACCGCCGG 76517 28 100.0 32 ............................ ATGAAGCTCACCGCGCGCACGTCGGCCGGCGT 76577 28 100.0 33 ............................ CGAGTTCTCGTAGCGGAAGATGCCGCGCTCGAC 76638 28 100.0 32 ............................ AATTACGTGTCGCAGTTCCCAGCTCGTGGGGG 76698 28 96.4 32 .G.......................... TCACCGCCGGCCACGACATGCCGGACGAAGCC 76758 28 100.0 32 ............................ TGGGACAACGGCTGCGGCGAGGGTTGCCATTG 76818 28 100.0 32 ............................ ACAGGATGGGCTGGCCTGTCCGGCTGAAAATC 76878 28 96.4 32 .................T.......... AAAGCCGGTCCCCCGCTGCGGGCCGTGCACCG 76938 28 100.0 32 ............................ GTGCGCGAGAAAAAATGGCGCGACGTGGTGGA 76998 28 100.0 32 ............................ TCGATGGAGCACGCCCGTGCATGTGACTCTGC 77058 28 100.0 32 ............................ AGAATCCGCACATCAGGGAAGCAGCCAGCGAA 77118 28 100.0 32 ............................ CTCGCCGTACTGCGCCCCTTTCTCACGGGTAT 77178 28 100.0 32 ............................ TCGAAATACATCCCCGCCGAGGTGCGCGAAAA 77238 28 100.0 32 ............................ ACTGCGCCACGGCGGCCGGCGTGCCCGTCTTC 77298 28 100.0 32 ............................ TGTTGATGACAACGGGAGAGGTATCTTGAGCA 77358 28 100.0 32 ............................ CTTCTATCGCCCCTCGTCCGATGCCGAGCAGA 77418 28 96.4 32 ...............A............ TTCATGAGACGCGCCGCGCGGGTGGGCGCGGC 77478 28 100.0 32 ............................ AAGGCCCGGCGGATCGGCATCGAGGCCCGAGA 77538 28 100.0 32 ............................ GCTTCGCCGGTGACGCGGCGCGCGCCTATGCC 77598 27 85.7 92 ..........-.........TG.....G CCGCCAACGCGCTCGAAGAAGTGGTCAAGTTTCTTAGCTGCCTGCACGGCAGTGAACCCCATCACGAATTCCGGCACGACAATGCCGCATTT C,C [77613,77623] 77719 28 89.3 32 C..AG....................... ACCGGGCCATTGCGGGATGGATAGCGTGTCCC 77779 28 82.1 0 ..............G........TCGC. | ========== ====== ====== ====== ============================ ============================================================================================ ================== 86 28 99.4 33 GTTCACTGCCGTGCAGGCAGCTAAGAAA # Left flank : CTTGACCGACTCATCCGGATCGGCTGGATACAAGGCATGCGAGGCCATATCGACCTGACTCCGGCCCGCCCGGTTCCGGCAGATGCCGGTCACCGCGTCGTGTGCCGGGTGCAGGCGAAAAGCAGCCCGGAACGCCTTCGCCGTCGCCTCATGGCACGTAAGGGTATTGGGGAAAAGGAGGCGCGCGAGGCAATTCCAGATTCTGCCGCACGCCGGCTTCGACTGCCCTATGTGGAGCTGGCGAGCCATACGACAGGGCAGCGCTTCCGACTGTTCATCGAGCACCGGCCGATACAGCCCAGCCCAGCGCAGGGACAGGGACTCTTCAGCACATATGGCCTTAGCGCCACGGCCACGGTGCCATGGTTTTGACCCTTTTTTTCGGTAGCGTTTTGAGGGGTTGAAAAACAATGGGTTATGAGCAGGGCGAAGGAAAGGGGAAATACGGCGAATTCCGAGAATTTTTCTATTAATCAGTTGGTTGATTTGATTTTTTGCTA # Right flank : AGTTCGAAGAACACCAGATCCCGTTCGACTTCATTGGCGGAGAAGCCACAGCCCAGACGGCCGGGGCCGTCCAGGGCGATCTCGCCTTGCTTGATGTACTTCTCTTTCTGGCCGTCGATGACCAGGTAGGTGCCGTTGGTGCTCTGGTCGACCAGGAAGAAGCCGCTGTCGCGGCGCTCTAGGCGGGCGTGCTGGCGGGAGGCGCGTGGGTCGATGATGACCACGTCGTTGCCTTGCTCGCGCCCCAGCAGCAGGACCGGGCGCTGCTCGTCGAGCCGCAGTTCGTCCTTCTGATGATGGATCACCAGGCTCTGGCGGAGATTGTCCGGGCTGGGCGGCGGGGCGACCACGGCCATGCGGTGGCCGATTTCGTAGATGGGGCCGTCTACGCCGTGGATGCTGGGGCCGCGCGAGTCGTCGGCGCTGGCGAAGTGGCGGGCGGGGGTAGAAAGCTGGGAAATGGCCGCTTCGCTGGCGAGGGCCTGGCCGGGCTGGGCGCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //