Array 1 147389-148230 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNIM01000007.1 Actinomyces ruminicola strain DSM 27982, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 147389 37 100.0 37 ..................................... GCTAGGTAGGCGTTCTTCTCGTGATCGATGTGCAGCC 147463 37 100.0 34 ..................................... TTTCCTCGCTCCTCCAGGTGACCTCGTCGCGATG 147534 37 100.0 38 ..................................... CGCATAGTGCATGGTGTATGGCTTCGACGACGGTTGCC 147609 37 100.0 37 ..................................... GTGCAGGAGCCGCTGGGCAGTGTCGGTGATGGTTCTG 147683 37 100.0 37 ..................................... CCCCCCCATAGCCGGTGCATAGGGAACCGACGGTAAT 147757 37 100.0 35 ..................................... GTTGCTCCTACAGGCTCAGATCGTTGTTCGTGGGA 147829 37 100.0 36 ..................................... GGTGGCCTCGACCTCGGCCTGGGCGGCGTCGGCCTC 147902 37 100.0 37 ..................................... CTTCCGCCACACGCTTGAACGGGACAAGCCACAAGCC 147976 37 100.0 36 ..................................... GGTGGCCTCGACCTCGGCCTGGGCGGCGTCGGCCTC 148049 37 100.0 37 ..................................... CTTCCGCCACACGCTTGAACGGGACAAGCCACAAGCC 148123 37 97.3 34 .................................G... CAGCACTGCTGGGAGGTGGCCGGTTCGGTATCCA 148194 37 78.4 0 ................T..G.C.G.C.......G.GT | ========== ====== ====== ====== ===================================== ====================================== ================== 12 37 98.0 36 GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Left flank : GTCACGACGTTGTGTGCGACGGCGGCGCGGTCAGGCGTGCCGCGCCGAGGTCATTTTGGCACCGATCTGGTGGTGGCGGGGATGTACAGGTGTATTAGTTCTTGGCGCATTTCGACGAAGTGTGTCGTTGTGCGGGGTGATGGGCCGGGCCGGGGCGGCGCCGGGAGGGGCGGCGTGACCGCGCCGGGAGGGCGGCGAGCGTGATACGGCTGTGGCGTGTGGTGCTGTTGGGGCGTGTGTGCCTGGTGTGGCGTGCGCCGGGAGGTCACAATTTGGTCTACGGTACAAAGATTGGTACGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGCCTGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTCCAACGAAAGGTGGTAGTTTTGGGGTGGTGCCAGTCGGTCCCGTGGGGTGCTTGCGGGGCCGGTGGCGATCTCGCCTCTGGAAGTGGCGGTATGACGCGGTTTCCAGGGGTAGGG # Right flank : TGGGGTGCGGGGTCGCAGCCGAGTTGCATTGGTAGTTGGCTGCGCCAGTGGCCGGTTTGATGCATGTCTATGGCCCCTTCAGTGCTCCGTTGGCTGGCGTTAGCAACGGGCTCTTCCGGTTTAGGGGCGTGGGGTAGACGCGGACGGCGCCTCGGTCTGGTGCGGTAGTGACTCGGGCCTGGCTGGTCGGTCTCGCCCGGTGTCAGTAGCCGAGCCCGCGGGCTGGTCGCGCGTGTCGAGCCGGATACGCACGGCGGTCAAGTCTCTTGGTGTGGTGTAGATCTGGTTATGCGGTGATGGCCATGATGGGGTGGGTGGTTTCGGCTTGTTCGTGGAGGATCCGTGT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 20459-21013 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNIM01000019.1 Actinomyces ruminicola strain DSM 27982, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 20459 37 97.3 37 ..........G.......................... GTATGTAGTTGGGGTCGCCATCGCTCCTGATCGAGAA 20533 37 97.3 36 ..........G.......................... TCAGTGCCCCACGGTTCGACCTCCATGATGTGCTCC 20606 37 100.0 37 ..................................... CTGCCCCCTCCCATCACATTCGGGGCACCGGTAGGTG 20680 37 97.3 38 ..........G.......................... TAGACATTCTCTAGTACTCCTCTCTGTCGTGGTTCTCT 20755 37 100.0 38 ..................................... TCTCGGCTAGCCGAGGCGGACGTTGAGACAGAAAACGC 20830 37 100.0 37 ..................................... GCCTTGGCCGTCAGCTGGGAGGTGGCTTCGATGTCGC 20904 37 100.0 36 ..................................... TTCTTGGTCGCGTGGTTAGGCCACGACTAAGAATTA 20977 37 97.3 0 ..........G.......................... | ========== ====== ====== ====== ===================================== ====================================== ================== 8 37 98.7 37 GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Left flank : TGTACGACGGCGGTCCGCGGCTACATGGGGTCTTTGGGTGTGTGGCGGGCCTCGGGATGTTTGTGGCGGCTCTGGTCGTGGCCCGGGGGCTGTACCTGTGGCTCGGCCCCAGGGCGCGATCGAGTGAAAGGCGCGGCCGTCGACGAGAGCGGTGACGAGTACGCGTGTGGTGGTGGGAGGTCTAAAGGCTGGATGGTCGGCGGCCCCGGGTGCGGCTTCCGATGCTGGTGGGGTATGCGTGGCCTGTGTGACGTTCAGCGTAAGGTCACAATTTGGTCTACGGTACAAAGATTGGTGCGTTTTGACCCCGACTTTTCCGCATGACTTCGTTGAAAGTTGGTGGCTGGAGGGGCCTGGAGGGGTGTCGGTGGCGCTTGGCTTGTTTCCAACGAAAGGTGGTAGTTTTGGGGTGGTGCTAGTCGGTCCCGTGGGGTGCTTGCGGGGCCGGTGGCGATCTCGCCTCTGGAAGTGGCGGAACGGCGCGGTTTCCAGGGGTAGGG # Right flank : CGAACGCACGGCCTCCACACGCTCCTCCACGGTGTCGGCGTCAGGAAGCACTGTTCTTCGGGTTTGGGGTGTGGTGGTTCGGGTTTGACGGTTCTGGCCTGGGGTGGTGGTGTGGTCCTGTTCGGGTGTGTGGGGTGGTTGTCGGTGTTGGGTGTTGTTGCTTGCTCGGGCGGGTCGGTGGGGACGGTTCGAGGGCGTGGGTTGGCCCGCGGTGACGTGGCCCGGCCCTGCAGGGCGCTGTCTGGGAGGGTGTTCTCGACGGCCGGTCGGCGTCCTGGAGGTCCGGCCCGGAAGCGACAAAGACCCGACCGGCCCGGCAACGTCACCGTCCGCCCGAAGACGTCCTCGGGTGGGCGAGCACGACCTGTTTAGCCCGAGCACGACCTTGGACGGTTGAATACGACCTCTTCAGCCCGAGCACGACTCTTCAAGCCGCAGCCCCGCGCTGAACCATCACGGGGTGTTGGCGCGAGCGTGGTGCTTCGGCCTGGCGTGTCGTG # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGAAGCACCTCGCACCTTCAGGTGCATTAAGAC # Alternate repeat : GTCAGGAAGCGCCTCGCACCTTCAGGTGCATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 404-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNIM01000003.1 Actinomyces ruminicola strain DSM 27982, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 403 37 100.0 37 ..................................... GCCGCCCTCACCTCGCTTGGCCGCCGCCACCCGGACA 329 37 100.0 37 ..................................... AGGGAGGGTACTGGAATATTCTTCCCTCGACGCTAGA 255 37 100.0 34 ..................................... CGGCCTCCGCTGCTGACAACACCACCGACGCTTC 184 37 100.0 36 ..................................... CGCCCCCTCCTCACCCTCCTCGCTCTCCGGCAACGA 111 37 97.3 37 ..........G.......................... CCTTCGCACCCCGGAATACCAACAGGTAGACCAGCGG 37 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 99.5 36 GTCTTAATGCACCTGAAGGTGCGAGGTGCTTCCTGAC # Left flank : AGCGCGCTGGTCCTGCTGGCCGTTGAGCGTCGTTCGCCGGGCTCGGCGGGTCGGCGGGGCCGCTTCGAGGAGGCGGGTCAGCCGGCTCTTCCGGTTTGAGGGCGTGGTGGTGACCCAGGCCCGGCCGGTCATCCTCGCCCGGTGTCAGTGGACGGGCCTGCGAGCCGGCAGCGCGCGCCGAACCGAGCCGAGTACGCACAGACCGCTGGAGTCCGGAGTGTACGCGTCGGGGTGGAGTGTCCAAATCCGGGACAAAGGCCGCAGACGCCGCTGAAGACGAATCGGGAAACCGCGTGATTTCAACGATCTGGAAGTCACGTGCAAGTGCCTGAAGCTCGTTTGTCCCGTGTTTGGACACTTTCCATGACGTGCGGCAGCGGCAAGCTCCGCCCGCAGGCGTGCCCGCAGATGAGCAGGCCAGCACTCGACCCGCGCGCCCCAGACAACACACCCTCAAACCGGAAGAACCGTCAATAGCCCATGTGACGTCAGTCTGGGCC # Right flank : C # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATGCACCTGAAGGTGCGAGGTGCTTCCTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //