Array 1 67-2997 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDJX01000001.1 Croceitalea dokdonensis DOKDO 023 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 67 46 100.0 30 .............................................. GACCCTTTTAGGAAGTTCAATGAGTTTGGC 143 46 100.0 30 .............................................. CGAGCTTTCGGTCAATGGTGTATATGATGT 219 46 100.0 29 .............................................. CTGAACAACTACCTATCAGAGGTGGTTGT 294 46 100.0 30 .............................................. TTAAATCCTGCGCATACGTTAAAAGGGTAA 370 46 100.0 30 .............................................. ACAAAAAATATCCAAACTAAAGCAAACTAG 446 46 100.0 30 .............................................. TATACACGCAGCGGCATTAAAGGCTATGGC 522 46 100.0 30 .............................................. TCTTAGACCACATTAAAGAGCAAATAAGTA 598 46 100.0 30 .............................................. GGAACTGTTTTAAATCCTTTTATAATCTTA 674 46 100.0 30 .............................................. CCATTTCCTTGCCAAAAATGAGAGCATATA 750 46 100.0 30 .............................................. CTGCAGACTGCAGTAACTATATTAAGACAG 826 46 100.0 30 .............................................. AAGCTCGATAACTACGAGAACGAAGCCCAA 902 46 100.0 30 .............................................. TTATTTAAAATTGTTATTTATGCAAGTACA 978 46 100.0 30 .............................................. GACCGCCACCCATTGCATGACGCTGTTTAT 1054 46 100.0 30 .............................................. ACAAGAGTCTTTAAAGGACATTGTCACTTG 1130 46 100.0 30 .............................................. AAAGGTAACAGAGGAAACCGTGGAACTGTT 1206 46 100.0 30 .............................................. CCGCTGGTCTTCCAGAGGCGTAAACGATGC 1282 46 100.0 30 .............................................. ACCAAGTGGTTTTTGAGCGAAATAATAATG 1358 46 100.0 30 .............................................. AAGAGTAATTGAAATGTTACAAGAAGAATT 1434 46 100.0 30 .............................................. GCTAAAGATGTAAGCACAACTGTAGTAGCT 1510 46 100.0 30 .............................................. CTAAATTAAATAATTATTTAGAACGATTCT 1586 46 100.0 30 .............................................. CAACCTCCCTTTTTTTGTTTTCACTTCAAT 1662 46 100.0 30 .............................................. TACAATCCCCCCAGACAGGCGGGACGGTCG 1738 46 100.0 30 .............................................. TGGGTTAAACGCTCAGACCACTTATCTGTT 1814 46 100.0 30 .............................................. TGGCGTTAATCATTTCAAAATCCCAATCGG 1890 46 100.0 29 .............................................. GGGTGAGATTATTGATTGTGACCCTTTTG 1965 46 100.0 30 .............................................. ACTCTAGGGATTTTCCAACCCCATACCCCC 2041 46 100.0 30 .............................................. ATTATGATACTAATTACTTCAAATCCTTTA 2117 46 100.0 30 .............................................. AAAAATATATAAGTAATCTTTAAATCTATA 2193 46 100.0 30 .............................................. GTGTGTTCATGCTTTTTTAAATGTTGACTG 2269 46 100.0 30 .............................................. TCACAACGGACAACTAACGCGGTATATAAA 2345 46 100.0 30 .............................................. CTTTTGGTGCTGTATAGTCTTTAAGCCAAT 2421 46 100.0 30 .............................................. AAAAGACCGTTACCAATGACTTTAATGTAA 2497 46 100.0 30 .............................................. TCAATCCTATTTAGATATTTCCTTTTCAAA 2573 46 100.0 30 .............................................. GCCAAGGTCTGGATTTGTTTCAGCACCTTA 2649 46 100.0 29 .............................................. TAATTGCACGTTTGATGGAGTAGGTAGGC 2724 46 100.0 30 .............................................. TCTTCACCCATTTCAATTAAGTCTTATCGT 2800 46 100.0 30 .............................................. ATCGGTGCTATCACTAATACTTCAGATTCA 2876 46 100.0 30 .............................................. TTGATGGCAAACTGACCTATGACTTTGACA 2952 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 39 46 100.0 30 GTTGTGAATTGCTTTCAGTTCTTTAATTTTAGGGATTATTCACAGG # Left flank : GCTTTCAGTTCTTTAATTTTAGGGATTATTCACAGGACCATGGTAAAAGTAAACGACGAGAACATCG # Right flank : GATACTTGCTGTAAAGAGCTGGTATCCTGTTTCTTATGTTTGGCATTAGGATAAGTGATAGTATGTATTGTTTTGCCTAATGTAACCATTCCTATCTTGTTTTTAGCATCCTAAAGAAAGTAATGCTCCCAAATCATTGCTTTAGCTCATGTCTATGTTATTTTTAATGGTATTCGCTGAATCTCGTAAACTCGATTTCAGTTCTTTAATTCCTGCCCTGAGCGTAGCCGAAGGGCTAAGGATTATTCACAGGATACTTGCTGTAAAGGGCTGGCATCCTGTTTCTTATGAATGGCATTAGGATGAGTGATAGTATGTGTTATTTTGCTTAATGTAACCATTCCTATGTTGTTTTTAGCATGCTAAAGGAAGTAATGCTCCCAAAGCATTGCTTTAGCTCATGTCCATGTTATTTTTATCGGTATTCGCTGAATCTCATAAACTCGATTTCAATTCTTTAATTCCTGCCCTGAGCGTAACTGAAGGGTTAAGAATTATTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAATTTTAGGGATTATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.39%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.30,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //