Array 1 6-167 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FQWY01000044.1 Thermosyntropha lipolytica DSM 11003, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	==============================	====================================	==================
         6	    30	 100.0	    36	..............................	CCGCAAACCGGAATGTCTTCTCTGTAAGTTCAATGT	
        72	    30	 100.0	    36	..............................	CCAAATCCTGCATGAAACCATAAATCAAGGATACAA	
       138	    30	  96.7	     0	...................A..........	|                                   	
==========	======	======	======	==============================	====================================	==================
         3	    30	  98.9	    36	GTTTTTAGCCTACCTATGAGGAATTGAAAC	                                    	       

# Left flank :   ACACAG
# Right flank :  CTGAGAAAGAAATATCAGGAAAATATGTAAGAAGTAATAAGGCGTTTAATTTACATGCGAGAACTAGAAGGGTATTTTGTGTTGTGTTTTAAGTTTTGAAGGAAGGATTTTAAAGATTAGAAGGAGAATGGAAGCTGTAAAGATTTGTTTTTGTATATTGAGGAAGGAAGGGGTTTGGTATGCGAAGAAGTAATGTTAATGTTGTTTTAGAAACTATAACTCCTTTATGGACAGGAAATGCGTGGCAGGAAAATAATGAAGTGCGTCCTTCTTCGTTAATGGGAAGTTTAAGATTTTGGTTTGAGGTTATATGTTTTCTTGCCTGGAAAGAGATTTTTTATGGGGAAAAAAAGAATACGATTAAAAATAAGGAGGAAAAGTTAAATGAATTCCTGCTTCAGCAGGGAGTAAAAACCGAAGATGTTTGTTGCTTTTTAAAGAAAAAACTTAAGTTTTCGATCCCTGAAATAATCTTTGGTGATACTGGGTGGAAAGGGCTT

# Questionable array : NO	 Score: 8.31
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTAGCCTACCTATGAGGAATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:59.38%AT]
# 	Reference repeat match prediction:         F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [5.0-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.27   Confidence: HIGH] 

# Array family : I-B [Matched known repeat from this family],   
//


Array 1 9980-10164 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FQWY01000051.1 Thermosyntropha lipolytica DSM 11003, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                            	Insertion/Deletion
==========	======	======	======	=================================	===========================================	==================
      9980	    33	  97.0	    43	...........T.....................	ACGCTAGACTGCTAAAAAGCAGTATGCATCGGGTTTAGCAAGT	
     10056	    33	 100.0	    43	.................................	ACTCCCAAATGGTAACGGGTTCGTTCCAAGGGTTGTCAGAACG	
     10132	    33	  97.0	     0	...............................C.	|                                          	
==========	======	======	======	=================================	===========================================	==================
         3	    33	  98.0	    44	GTTACAAAACCAAATCCCCGTCAGGGGACGGAA	                                           	       

# Left flank :   TTGCCGATAAGGTGTCGCTGGAAGAAAAAAACCTGGCAGCTACCCTGGCTGAACACAGCTTTATCAGCGGATACCGTCTGGAAACCAGGTATTTCCCGCTGGAAAAAATATTTATTCCTGCTTTTGCCGGGAGGATGAGTATAAAAATAGCGGCTCCATCACCTATGGTTGCGCTTATAAATATGCTCTTGGGCTACTCTGCCTTTTCCGGCCTGGGCATAAAAACATCCCTGGGAATGGGAGGAGTAAGAGTGATAGAAGAAAAGAGAGGGGAATGGTCAGGAAAGAGACAGGCTATATTGAAAATTCATAGCAGCAGGAAATTTTTAATGATAAAATATAGTTATGGAGATTGACGGGTATTATCTCCCCCGCTGCCGAAAAAAAGGGGGATAGAAGCCTTTAAACAGGGATGAAGGATTCATATTTGGTTCCTGCAAAAGTTCTCCCCCGCAAAACAGGGCTTAAGTCCTTGCCAGATGGGCTTTTCAGGAGACAGG
# Right flank :  GTTATTGAAAAATTTTTTACCTGATGGATACCTGATATATGGGAAGGAGCCCTTTCATGAGCGAAATAAACATCCATGACCGGTTTTCCAAAAAATACCTGGAAAATCCCCGCATAGCAGGGAGTTTTCTCGCCTACATCCTGCCGGAGGGAATAAAAAAGATAGCTGATCTATCAAACCTTACTTCCAATAAGACCGGATTCATAGATGAAGAACTAAAAGAAGCCTATTCTGATCTTCTCTTCAAAGCCAGGTTAAAAAGCGGAGAAGACCTTTTTATCTATTTCCTGATCGAACATAAAAGCTACTTCTATGAACATAC

# Questionable array : NO	 Score: 2.57
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTACAAAACCAAATCCCCGTCAGGGGACGGAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [12,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-9.10,-8.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.74,0.27   Confidence: MEDIUM] 

# Array family : NA
//