Array 1 1378169-1376549 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018809.1 Lactobacillus jensenii strain SNUV360 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1378168 36 100.0 30 .................................... TCCAAAGGCCCAGCCCAATTTCATCCACCA 1378102 36 100.0 30 .................................... TCACTATCAGTTCGCTGTTGGGGATGAAGT 1378036 36 100.0 30 .................................... TATTACTTCATTTACAGCTTCAGCTTGCTT 1377970 36 100.0 30 .................................... AGCAGGACACGAATTAGGTCATTACGTCAA 1377904 36 100.0 30 .................................... GATACTTTTTGCGGTAGTAATCCAACTGTT 1377838 36 100.0 30 .................................... ACCAAAGTATGCCTTGACTGTAATTTTTAA 1377772 36 100.0 30 .................................... TAAAACTGCTTTTGCTATATTGTCTGCGTC 1377706 36 100.0 30 .................................... AGTAAGGACTTGAAGAACCCTAAATATGAC 1377640 36 100.0 30 .................................... TTGAATCAGCAAGTGAATAGGATCCATCTG 1377574 36 100.0 30 .................................... TCTTGATTTCACGAGTTAACATTGGTTGAT 1377508 36 100.0 30 .................................... ATTAGGATACTGTGTAGGATATACCTTCCA 1377442 36 100.0 30 .................................... GGATACTGGCAGGCCTTCCATTTATCAGTT 1377376 36 100.0 30 .................................... TGTTTAAAGTAGTAAACAAGACTATTGAGC 1377310 36 100.0 30 .................................... CTCTATTTTAATCTGCATACATACATGTAA 1377244 36 100.0 30 .................................... AAGACAATACGTAATAAGGATATTGCACAA 1377178 36 100.0 30 .................................... AATATATCAAGCCTGAAGCATTAGATGGCT 1377112 36 100.0 30 .................................... CTAAAGCTTTTTCAGCATCATTTTTAGTGT 1377046 36 100.0 30 .................................... ACTACTTTCAATTTCTCTGTCAAGCTTCTT 1376980 36 100.0 30 .................................... TACGCCTAGTGGCTATATTGACTTAACTAG 1376914 36 100.0 30 .................................... AAATTTTTGCAGGAAATTGCCGATGAGCTA 1376848 36 100.0 30 .................................... GGCTAAAGACAATAAGATTAATGTTTCTAA 1376782 36 100.0 30 .................................... ACTACCAGAATGGGCAGTTGCAGAAAAGAT 1376716 36 100.0 30 .................................... GAAAACTTGAAGTCGCAACTCAATAGCGAG 1376650 36 100.0 30 .................................... AAAAGTAGTCGATGAATATTTAAGGTTAGT 1376584 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.9 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAGGATTATCTTAATTCTTATCAGAATAAGATTATTTCAAATCTGTTTGATACTTTAAATGAAAATCAGAGAAATAAAATATTTAATACGTGGCGTCAGCTGAGTACTGATATTCAAGATATAATATTTATGACTGATTTACCAATTGAAGTTGGTGAAAATCTAGATTTAAAGAAGCTATTCAAATTTGATGGAATTCATTTTGATGATTCTGTATTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAACGTAAGTCATTATCTTACAAAAGAACAATTGAATAACTTAATTACCTTTATAAACGAAGTAAATATGCCTTTGATATTAATAGAATTTTCATCTTCAGATTTTAAGGTTGTTAGTGGGGATGCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTTAAATCTGAGAAGCTGATGATAAAATGTCG # Right flank : GTAACAAAAACCAATTTAATTAATATGATCATATTTTAATTTGAGGAGAAAACTAAGTATGTGGACATTTCTTAAATTTTTTCAGACACCAGTAGGCTATTTAATTGGAATGGCTATTCTTGTCATATTGCAATACGTGTATGAATGGATAAGAGACGAGCGCTAAAATATTGTTTGGTTTATTGGCAATTAATATACTTTAGAAAGCTGCAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGCATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATACGATTTTTAAAAGTTACTGAGGGGGCATAATATGGATGCAATTATTGATTTCTTTACTAACCCTATATGGATTACATTTATAACAATTTTATATTTTTCTATGGAGTTTATAGAAAATAAGCGAAAAAAATAGCGCTTTTTTATTGGTAAAGTAATAACAATTATGTCAGTTTTAAAAGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //