Array 1 1911100-1910194 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020612.1 Paracoccus contaminans strain RKI 16-01929T=LMG 29738T=CCM 8701T=CIP 111112T chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 1911099 32 100.0 35 ................................ AACCCCGACGCGGGCATCAAGGTCACTGTCGCCAG 1911032 32 100.0 33 ................................ GCCCGTCGAAGATCCGCGAAATCGTCGGCCAGC 1910967 32 100.0 37 ................................ ATCGACCGGCAGCGGGTCGTGCAGATCGGGGCTCCAC 1910898 32 100.0 34 ................................ CGCGCACACCACCGCTCCAGATCGGGCCGTCCTT 1910832 32 100.0 35 ................................ ATTATTCCGCCCGGCCCGGACTGCCGCGCCGATGT 1910765 32 100.0 40 ................................ GCGTCCGGGTCTCGGATGATCTCCATCAGCCGCGGGACGT 1910693 32 100.0 33 ................................ GCGTCACTGGCCTTGTAGCGCCCCGGCGCCCCG 1910628 32 100.0 36 ................................ TTGCCTCTCAGATAAAGGGCAGAGGCGCTCTTGCCG 1910560 32 100.0 35 ................................ TCTTGATCGGCGGGGGCGCAAGGCTCTCGCCATCC 1910493 32 100.0 36 ................................ GGTCCACCAGGAGGCCGATGAGGAAGGGAACAAGTG 1910425 32 100.0 37 ................................ CATCTGAGCCAGAAAGGCTTGCCAAGCTAGTTGAGGC 1910356 31 96.9 35 .............-.................. GGCGCGCCGATAGCCCAACCGCGACAGGTCATGAC 1910290 32 100.0 35 ................................ TTGGGATCGTCGGGCTCCAAGCCCTGCTCCCTAAG 1910223 30 93.8 0 ...................--........... | ========== ====== ====== ====== ================================ ======================================== ================== 14 32 99.3 36 GTCGCCTCCCGCAGGGGGGCGTGGATCGAAAC # Left flank : CCTATCCTCCCTGGTTCTGGAGCTGAGATGCTGGTCCTTGTGACCTACGATGTGCAGACGCTGGACCCCGCTGGCCGCAAGCGCCTGCGCCAGGTGGCCCGCGCCTGCGAGGACTATGGCCAGCGCGTGCAGTTCTCGGTGTTCGAGATCGAGGTTGATCCGGCCCAGTGGGCACGGCTCAAGGCCCGGCTGGAGTCGATCATCCGGGTGGATGTGGACAGTCTGCGCTATTATTATCTGGGTGCGAACTGGACCCGGCGGGTCGAGCACGTCGGCGCCAAGCCTGCGAAGGACTTAGGCGGGCCGCTGATCCTGTAGCCTTTGCGAACCCAAAGCGTGTCGCCTTCCATGCGGGGGTTCGCAAGCACGGATTTCGACTGGAGTAGCGCAACAAATGCCCAAGGTGAGCAGCTGGTCTGACTATGTCAGTCGTTGGAGCGGCAGGATTCGCATCTAGGAGAGTATTATCCCGTGCCCATCAGGGTGATAGGGGTGGGGGA # Right flank : GTGGTGGTAATGCGCCCCATTTTAGCGGGCCGCAACCCTAGTACTCCGGCTGACCTGTCACCGGTCTCTCGTCCAGCGGCCACTTGAGCCCGGTCGTCGCCGACGCTGCGGATTGAGCAATCTGCCGGAGCGCGGAGCTTCCATCTGGCGCAGCGGGGCGGGCGATTGCGGGGTTCAGGTTTGCGGCGAGGCCGACCGGGTCTAGTGAGCTAAGGCCGAGTGGGGCCTTTCGGGGCTCTGTTGCACAAGCGTCGAGATGCTCGTCAAGGCCGCATGCCACAATATCGTCACTCGCGGCATTCATCTGATCGCGCTGGTGGGTCGCTGCTTTTCGATCGGCAAGGTGGTGTGCGCCCGGTCGACGTTGGCAAAGCCCCACATTTGCCTGCGGAAAACGACCCCGCCCGGCATGACGCGGTGCCTAGTACATCGCGCCGGTCTGCGGGCGGATATCCTCGCCGATGGCACAATCCGCTGCGGGCACCAGGGCGTTCGGCCGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCCGCAGGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //