Array 1 3024342-3028280 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015121.1 Acinetobacter baumannii strain ab736 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 3024342 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 3024402 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 3024462 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 3024522 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 3024582 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 3024642 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 3024702 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 3024762 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 3024822 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [3024874] 3024874 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 3024934 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 3024994 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 3025054 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 3025114 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 3025174 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 3025234 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 3025294 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 3025354 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 3025414 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 3025474 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 3025534 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 3025594 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 3025654 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 3025714 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 3025774 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 3025834 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 3025894 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 3025954 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 3026014 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 3026074 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 3026134 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 3026194 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 3026254 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 3026314 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 3026374 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 3026434 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 3026494 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 3026554 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 3026614 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 3026674 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 3026734 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 3026794 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 3026854 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 3026914 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 3026974 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 3027034 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 3027094 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 3027153 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 3027213 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 3027273 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 3027333 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 3027393 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 3027453 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 3027513 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 3027573 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 3027633 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 3027693 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 3027753 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 3027813 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 3027892 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [3027916] 3027952 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 3028012 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 3028072 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 3028132 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 3028192 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 3028252 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-50] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //