Array 1 23416-20946 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSJR010000008.1 Citrobacter sp. 18056 isolate 18056_Citrobacter_Ancestor, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 23415 29 100.0 32 ............................. AAATCATGAGCGTTGACCCCGTGGACTATTGC 23354 29 100.0 32 ............................. CACGACGTTTAACAGCGCCGCCATGTTTATCC 23293 29 100.0 32 ............................. CCCTCTTGCTTCGCCCATTCCATTTTCACCGG 23232 29 100.0 32 ............................. CGGCGTATTAACAACAACAGCGCGTTTTCCAT 23171 29 100.0 32 ............................. GTAGAAATCTTTGAACGGGATAAGCTGGATAA 23110 29 100.0 33 ............................. GAGATATGGGGCGGCGCTGATATCCGTACCGCA 23048 29 100.0 32 ............................. GGATAGAGCTTGCCGTCAAGCGTGGGGCGTAC 22987 29 100.0 32 ............................. TTTTCTATGGTCATGCCTTCGGCGTTCATGTC 22926 29 100.0 32 ............................. GGATCGTGCCGAACGACGAACTTTTCGGGATT 22865 29 100.0 32 ............................. GCACAGGGCAGGGATAAGGCACACCGTGAATT 22804 29 100.0 32 ............................. CTCGTCAATCTGCTTTTCCGTCTCAGTAACCG 22743 29 100.0 32 ............................. AATATTGCGGCTCTTCTGACTCCGAATGGCTG 22682 29 100.0 32 ............................. CTCACCGGAATAAATGCTGCCGAGCAAGAGCG 22621 29 100.0 32 ............................. ATTCGGGTTTTGCTGTCGCCTTCCTGCATACC 22560 29 100.0 32 ............................. TTTCGCAGCTGTCTGTCGGTGGTGTAAGCATC 22499 29 100.0 32 ............................. CCCCCACACGCCCCACCATAATCAGGGTGTAG 22438 29 100.0 32 ............................. CGCGCGTTGACGGCCTCATTCGGTCTGTATTC 22377 29 100.0 32 ............................. CATAAAATTCTGTTTGAGATAATGAAAATGAA 22316 29 100.0 32 ............................. GAGGCACCGGGCGTTAATCAGTGGCTTGATGC 22255 29 100.0 32 ............................. CCTGGTCCCCTCGCCTTCGCTCTGCCATTCAA 22194 29 100.0 32 ............................. CGCGCAATTGATTGCCATCCGTGGCAACTCAT 22133 29 96.6 32 ............................T CCTGCCGCCGATATCGTTTTGGGAGTTACCGA 22072 29 100.0 32 ............................. CATTGCTGATAATGCGGCGCAGCGCTGGAATG 22011 29 100.0 32 ............................. GTATTAACTCGCGATCCATGGGGTAACGAACA 21950 29 100.0 32 ............................. GTTAAAGATGTCGATCGACGCAACATGGTGGG 21889 29 100.0 32 ............................. TCAATCTCAGCGTGCTGCGCCGTTACACCGTC 21828 29 100.0 32 ............................. TTAACGGTCAGCGTAACCTGCGCAACACGCTC 21767 29 100.0 32 ............................. ATGGAAAACACGTAATTCACGCCGGTGGCATT 21706 29 100.0 32 ............................. TGACGGCTGCCAGTTTCTTTGTGGTAGAACTC 21645 29 100.0 32 ............................. CTGGTACAGCTGTTGGGCGATGTGCCACGCAT 21584 29 100.0 32 ............................. AAATGGTGATCTGGAACCGTGAGCGTGTAAGT 21523 29 100.0 32 ............................. ATAGCGACTAACAGCCCTGTCACGACAACCGG 21462 29 100.0 32 ............................. GCTCCATCTACCTTACGATGGCTGCAACATTC 21401 29 100.0 32 ............................. AATTCAGTGAGTAGGGTTTCTGTTCTGTTGCT 21340 29 100.0 32 ............................. GCATAACCATGTCTGCCGTTGATGCTGAAACT 21279 29 100.0 32 ............................. GGGGGACGCGATTACCCCGAACTTGATTGTTT 21218 29 100.0 32 ............................. TTTACCTATCAAGATGTGAGCATTGAGGATTT 21157 29 100.0 32 ............................. GGCTGGACAGTAACCCCAGCCAATATAAAAAA 21096 29 100.0 32 ............................. AACATCAGCCGCATGACAATCAGGAGGCAAAC 21035 29 100.0 32 ............................. TCTTTGAACGCGATCAGGTCGATAACGGGATA 20974 29 89.7 0 .....................C....TA. | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTGATTGAAGAGGTCTTAGCGGCGGGAGAAATCGCGCCTCCACAACCTTTTGATGATGCGCAACCTCCAGCTATTCCTGAACCTGTCTTACTGGGTGATGTCGGTCACCGGGGAGGAGGAGGGTGAGTATGCTGGTTGTTGTTACTGAAAATGTCCCCCCGCGATTGCGTGGACGGCTGGCCATATGGCTGCTGGAGGTCCGTGCGGGTGTCTATGTGGGGGATGTTTCACGTAAAGTCCGCGAAATGATCTGGCAGCAAATTCAGGTTCTGGCGGATGACGGTAACGTTGTTATGGCCTGGGAGGTGAATAACGAATCGGGGTTTGATTTCCAAACTTGGGGCGTTAATCGACGCATCCCGGTGGAACTCGATGGACTGAGATTAGTGTCTTTCCTGCCCGTTTAAAATCAATAAGTTACAGTTCCTTAAAAATCAGAAATAGTTGGTAGATCTTCTTGCTGTTGAAAAATTATTGTAAATCAATGATATATTTTAAGA # Right flank : GATCTGAAGGGAGGTTATTTCCCCGCCTTCGCCAGTTCTTTCACCAGCGGCAGCATGATTTTTACGACGTCGCGACCACGGTGCTCAATACGGCCGGGCAGGGTTTTGTCGATGTACTGCAGGTTGTCGAGACGCACGTTATGCCAGCTGGTGCCATCCGGGAAGGAGCGGGATTTCGCCCGCTGCTGAAAACCGTCTTTTTTGCCGAGTGACCAGTTGGTGGCTTCGACGGAAAGGACCGGGATCCCCGCGTTATCAAACACTTCTGCGTCGTTGCAGCAGCCCGTGCCTTTCGGATAGTTGGCGTTCAGACCCGGATTGATAGCCGCCTGAATGCCATGCCTGCGGGCGATGCTGAGTGCGCGATCTCGGGTCAGTTTACGGACCGAGGCAGGCGTTGATTTCCCGCTATTGAAATAGAGTTTGTCGCCCACGACCAGGTTATCGAGATTGATAACCAGCAGCGTATTTTTCCTTTCCGCGGCGCTCATGCGTTGCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //