Array 1 6690698-6689861 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP082844.1 Nocardia asteroides strain FDAARGOS_1485 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=====================================	=====================================	==================
   6690697	    37	 100.0	    35	.....................................	ACCGACTGGTCGAGCTCCTCGCGGGCGACCATCTC  	
   6690625	    37	 100.0	    35	.....................................	ACCACCACCGAGGACGTGCTCAGCCAGCTGACGAG  	
   6690553	    37	 100.0	    37	.....................................	TGCTCGGCAGTGCGTGTTGCCCCCAACGTCGCCGCTA	
   6690479	    37	 100.0	    36	.....................................	GAGCCCCACCTGGACTTGCTGGACCGCATCAACGAC 	
   6690406	    37	  97.3	    37	.................C...................	TACGGCTCCCATGGCCCCACCTCCGAGATCGCCAGGG	
   6690332	    37	  97.3	    35	.................A...................	ATTTCCGGGCACCGCGCGGTGCTGGTGCGCAGCGT  	
   6690260	    37	  94.6	    35	................TA...................	CCGACCGGGCCGGGTCAGATCTGCGGGAACGTGGT  	
   6690188	    37	  97.3	    35	..........T..........................	ATCTGCCGTCGGGTCATGTTTCCGCCGCTGAACAC  	
   6690116	    37	  83.8	    37	.........AA...T.....T.A...T..........	CACTTCGATGAAATGGACAACGCGCACCCTTCGATGC	
   6690042	    37	  89.2	    36	...........T........T.AT.............	GTCGGCGACTCGTTCGACTGCTCTGGGTTTGTGGCC 	
   6689969	    36	  86.5	    36	............-.G..C..T.A..............	GGCCATTCTCGTTGGTTCGCTGGGCGCGTGCCCACA 	
   6689897	    37	  89.2	     0	..........G.........T.C.T............	|                                    	
==========	======	======	======	=====================================	=====================================	==================
        12	    37	  94.6	    36	GTGGCGGTCGCCCTCACGGGCGGCCGAGGATCGCAAC	                                     	       

# Left flank :   GTGGCATCGGACACTTCAGCGCCCCCCTGGCCACCCGCACCGGTGTCACCACCGACGACCTCGCCCTGCTCTGGCGCTGCATGACCCTGATGTTCGAACATGACCGCGCCTCCACCCGAGGCGAAATGGCCCTGCGTGGCCTCTACATCTTCACCCACCACGACGCCTACGGAACCGCACCCGCCCACACCCTCACCGACACCGTCCACATCACCCCCGACACCCGCCAAACCCCGACAACCCCCATCCGCAACTTTACCGACTACACCATCACCATCGACGAAGCCGCCATCCCCGACGGCGTCACACTCACCAGAATCGTCAGATAGCCCTGGCTACCCGCCGATGAACACACCGCAGGCGTTCCCACACTTAAGAACCCCCAGTGCACACGGATTCCCAAGGAGGTTCCGAACTGACGAACAGCAGTTATGGAAACCGAGGCGCCCCAAACAGACTCCGTCGCGGGGCCCGGTCGACGTTCGCCCAGTTCGCGCACC
# Right flank :  CCGATGACCGCGGCCGCGATGTTCGGTGTCATCCCCGTGGCGCTCGCCCTTACCGCCTCGAGGCTGTTGGCTGCTGTCACTGTGACCGAGCCGGGACGGTGTCAGGGGTGATGGGCCGCCCGGCTTTCTGTCTGGAAAGGTGTCTGCGGGCAGGAATTAGACGAGCCCGGACGGTGATGGCGTCCGGGCTCGGTCTGTCGCGGCTGCGGTTACCGGTCGGCGACTCGGCGTAGGTATTCGCGGATCAGCTCGGCTAGCCGTCGGTCCAGTTCGTCCAGTGCACGCGCGGGCCGACGCGCGCCCAGTGTTGCCGCCGCGCTGTATTCGGTGCCCAGTACCGCCAGCGCACGGTCACGCGGATGACAGGGCGACGGGCACTGGTGGTGGACGCTGAGGGTGCGGATCGCCTCGTCGGGACTGAGGTCACCGGGATCGACCGCGCAATCGGTGCCGGTGATGTTGCTGTCCGGGGCGGCCAGCAGTGTGGGCCGGTGGGCGAT

# Questionable array : NO	 Score: 5.53
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGGCGGTCGCCCTCACGGGCGGCCGAGGATCGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-13.00,-16.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [19-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [28.3-26.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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