Array 1 37794-36898 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPLM01000012.1 Apilactobacillus sp. F582-1 contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 37793 36 100.0 30 .................................... CAAAATTGGGATAACAAAACTGATTTAATC 37727 36 100.0 30 .................................... TAAAATTATGACCAACAAAGTTGACGTCTT 37661 36 100.0 30 .................................... GGTAACGTTACTTTCTATGGACAAAAGGTC 37595 36 100.0 30 .................................... TAGCTAATAGTCTCTATAGTAGTTATGCTA 37529 36 100.0 30 .................................... GCTATAACAATTCTAAAGAATGATCATACA 37463 36 100.0 30 .................................... TTCAACATATAAAACTCTAATACTATGGTA 37397 36 100.0 30 .................................... AAGTTTTGTTAAGTGATACATCATAGCAAA 37331 36 100.0 30 .................................... CATGGCACAACTGCCCTGAAGATTACGCTA 37265 36 100.0 30 .................................... GAAATTCATTAAAAATGTTAGAAATTATGT 37199 36 100.0 30 .................................... ATCACAATATCTTTCAATCTGATAACCGCT 37133 36 100.0 30 .................................... AGAAACGCAATGAGAAAAAGAAAGGAAGCG 37067 36 100.0 30 .................................... ATATATATATGTTGCGTTTGCTATCTCTCA 37001 36 100.0 30 .................................... ACGTAATTACAAATGGATTACCATTAACGC 36935 36 88.9 0 .............................A...CCT | CG [36901] ========== ====== ====== ====== ==================================== ============================== ================== 14 36 99.2 30 GTTTTAGAAGTATGTCATATCAATAAGGTTTATAAC # Left flank : GTCATGAGTAATAAAGTCCATTTTACAGCCTATATCAATCAATTTATTAAAAAATTTGTTAAAGGTTTAACTGAAGATGAAATTAATCAGCTGCATGCAGTTAACGATAAAATATACCGTACAGTCCAAGAACAATTATTTATGGCAGATTTACCTTTAAAAGTAACGTTTAGCAATGATTTGATCAACATTTTTAAGTACGCAAAAATTCATATAGATGGCTCAAACTTTAGCAATCCTTATGATATAATAAGGATATTGATTAAACTACATCTAGAATGTAACGATAAAAAAGTTTTAGGACTAACTAATGTAGCTCATTATCTTAATCCTAAACAAATCCAAGATTTAGTTAACTTATGTAATAATACAGGCGTTGCTGTATTTATTGTTGAGTTTATGAGTCTTAATCAACGTCATTTATTTGAAAAATGTAATTTTCATTACATCGACGAAGATTTTATTGATTGGCATTATTAAAATCAAATGAGAAAACAACG # Right flank : GCAATATTTTCAGCTCATCATCGGAGGTGCTAGCATGCTAAAAAGTATTGATAAAGATTTATGCATACGGATAATTGCGCTGTTTATTAACTTTTTATCCGTTACTTTATTTATGTTTAAAATGATTCCTATTTTTAGTAGAATAATGTATGGAATAATCAGCTTATTATTAATCGCTTTATATATTTTCTATTTGATATATCTTACTCGTTGCATCTACACAAAAATGCATATAAATCCTAAACAGATGATATTTTTAGGCGCCTGTATAATTTTTATGATGCAGTTGTTCTAAAGCTAAAAAAGTGACACCTAACATTTATTAGGTGCCACTTTTTTAATTATTAAGTTAATCCATACCCATTTAAAGTCATAGATAGTAAAATATAAACACAAAGTAAATATTTAAGCGAGGCGATTATTTGATTGAACGTACTCAAATTAATGCATACATCGAAAAAACATTTCATGTGAAAGCTGAAAAACGTTTCACTAAGTTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCATATCAATAAGGTTTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 44452-44996 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPLM01000012.1 Apilactobacillus sp. F582-1 contig12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 44452 36 100.0 30 .................................... ACCCAGTAGTAGTATGCGACTTCGTTTATA 44518 36 100.0 30 .................................... TAGAAGTTGTTATTCCTAAAGCTTGTGCAA 44584 36 100.0 30 .................................... AGAATGCTAGGTAATGGTAAGCCAGTAGTC 44650 36 100.0 30 .................................... CATCGATTGCAAATGGTACACCGGCTTGTA 44716 36 100.0 30 .................................... GTAAGACCAATGCCTACAGAAGACTATGTT 44782 36 100.0 30 .................................... CAACACACTAAAGACATTGAAGACTTAAAA 44848 36 100.0 30 .................................... GTAATAAATATGATGCACAACAACACCATT 44914 36 94.4 11 ................................AT.. ATAGAATATTG Deletion [44961] 44961 36 80.6 0 ..........C..................GAC.GTT | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 97.2 28 GTTTTAGAAGTATGTCATATCAATAAGGTTTATAAC # Left flank : ATGCATTCTCCAACGACGACGACTATATCGACGACGGGCGCCACGTTTGGTTCTTCTTTCCTCTGCAGTTTGTCCTTCATTGAATAGACGAGCACCAATAATATTTTTGCCATGTTTATGAATGATATTGTTATTGTCGTCTATTGCAACAAAACCAACTGATGATGTTCCAATGTCTAAACCTAAATGGTAGTTTTTCATATAAGCCTCCAAATTTTTATTATTTTTTAATTATATATTAATAAATAAAGAAAAAACTTGCAATAGGTAATTTTTTATAATACAATTAATTTTGTTGGGTAGCTCCCAACGGATAAACCTTATTGATATGACATACTGAGTTAAAATCAAACAAGGCATTAGCCAAGTTTATCCCTAAAGGCCATTTATATGTGGCATTTACATAAAAAGCTCAGAATAGCTTAGTTATTCTGAGCTTTTATTTTACATTTAAACCTTATATATAGCATGCTTTATTAGAATTCAATGAGAAAACAACG # Right flank : TTATAACTATCTATTTATGAATAACCAAAATAAAAGACCATTAGTGAAAACACTTAATGGTCTTTTACTTTTATTTAACTGGATATAAGTATTCGTTAGTTACGTACCCTTTAGTTACCGGTATGTAGTAATAAGTTTCGCCTTTATACTTATAAGTTTTAGTTAGCTTAAATGGTTTTACTTTTTTTGCATAACAAGATTGAGTTCGCTTAACCCCATGCTTAGTATGATGAAACTTGTATATTACACTGACGTTCATTGCGTTTATGTAATGCTTGCCCTTTTTAATCTTGCTGGCAGATGCGCTAACTGTACTTGAAACTAAGCCTAATGCGACTAATCCGCATATGGACAATGATTTAAACATTTTTAGCTTCATAACCAAAATCTCCTTAATTAATTATTACGATTCTATTATAAAACTTTTGATCTCCATTTACCGTTTTATACTTATTGTTTTATAATTTAATAGTAATAAATTATATGATAGGAGTAATAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCATATCAATAAGGTTTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 46-623 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPLM01000022.1 Apilactobacillus sp. F582-1 contig22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46 29 100.0 32 ............................. GATTACTTAGAAAGTAGAAACAAGTATCATCG 107 29 100.0 32 ............................. TACATGGTAATGGCTTTGGTTCAATTTGTTGC 168 29 100.0 32 ............................. GATATGCTCCCCACCTATCTAGGTGCTGAAAC 229 29 100.0 32 ............................. ATGTTCCTTGCTAAAATAATCTTTAAAAATAT 290 29 96.6 32 ............................G GCCTACCTTTGCCAAACTCAACTGATAGCACT 351 29 100.0 32 ............................. ACCTAACTTGATAGACTTTTGTGTTGGCATAT 412 29 100.0 32 ............................. AGGTCTGTAGCTTGCTCTGCCTTTAGTTGCAC 473 29 100.0 32 ............................. ACCGTAATGGCAGTTTAGTGAATATGAAAAAA 534 29 100.0 32 ............................. CAATCTTTTGGAATTTCATGCAGTGTGAAGCA 595 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.3 32 GTATTTCCTGCACACGCAGGAGTGATTCT # Left flank : CAGGAGTGATTCTATAGGCTGGGGAGCTAACCACTCCGCTTGCAAG # Right flank : TGATATATAATTAAATTTTTATCTGCAACAATTAAAAAAGCCGCTATAAATTTTATAGTGGCTTTTAATTTCAATATTTATCATAGTAATAATCTAATGAGTAAGCTTCGTTTTTACCTAACTCATTATTTGAATCTTCAGTATCCATATGGTTGGCGTACATCACATCATTCCATTGCAAATCATCTTCTTCATCGGCAAAGCCTAACGCATGACCAATTTCATGTTCAATAACTCTAGTCTGAGAATATTCAGACATACATAATAATTGTTTAGAAAAATTGATATTAGCATTCACAATGTAGTTAATTTTATGATTTTTAGAACTCATACTACTACCGCCAGTGTAAGTTCCAGTAATTCCCAATGTGTCTTTAGTCATATGCTGATTATTATGAATAACTCCACCGATATTAATATGGGCGGAATCATCATTAACATTAACCTCTTTTAGTTTAATAACATTCAATTTATTCCAATTGTTTACCGCTGCTTGAATA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTCCTGCACACGCAGGAGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.50,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 45187-43327 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPLM01000021.1 Apilactobacillus sp. F582-1 contig21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 45186 29 100.0 32 ............................. ATTTGTGTTTAGTTCTGTCATAATGTGTACCG 45125 29 100.0 32 ............................. AATTGCCGTTTCAAGCTCTTGCTCACTCTTAA 45064 29 100.0 32 ............................. AAAAACTACTGTTGTGGTTGCTCACTTTCAGT 45003 29 100.0 32 ............................. GACCAAATGAAAGATGACTACAGTGTTAGTGA 44942 29 96.6 32 ............................C AGCAGAGTGAAATCGACAGCTTAAAGTCGAAA 44881 29 96.6 32 ............................C AAAACAACAAACTCAAATTGGCAAACCACTAG 44820 29 100.0 32 ............................. CATTACATCCCCTTATTAGATAACTAGCGGTA 44759 29 100.0 32 ............................. TTCTTTACAATGACTAAAGATACTGGAGTTTT 44698 29 100.0 32 ............................. TAACGCCAAAAGCAGCACTAAGTGAGTAACGT 44637 29 100.0 32 ............................. ATCATTGTTTAGAAAATCATGTATGTTGCATA 44576 29 100.0 32 ............................. TGCAATCTTTTTAAAATCTTTACTGATTTGTG 44515 29 96.6 32 ............................A AAACTGCAAGTGTTAGCAGGACTGCAATAGTA 44454 29 100.0 32 ............................. GATTATGATGAACTTAGAGTATATGTAGGACA 44393 29 100.0 32 ............................. TGTATATCTAACTTGAGTGGTATCATCAGTCA 44332 29 100.0 32 ............................. CACTCTGATAACTGGTTTAATTACAGCTTTAA 44271 29 100.0 32 ............................. GGATTAACTTACGATTATGAAGTTATTCAGTT 44210 29 100.0 32 ............................. GCCATGAAAATTATCAGTGAATTGCCATGCGT 44149 29 100.0 33 ............................. AGGAAACTAGCAAGCAAAATTAAATACATCATG 44087 29 100.0 32 ............................. TGATGTTTCAAACGATGATTTACCATTTTAGG 44026 29 100.0 32 ............................. GGTAAGTATCATAACCGCCATGTATTTTGGGA 43965 29 100.0 32 ............................. GGCGTGCCGCTAGTTCAAAAGTGTGATCCTAA 43904 29 100.0 32 ............................. AACTCATTAGCGTATTTTTTATTAATTTTAAG 43843 29 100.0 32 ............................. AATGCCTTGATTGAACGTAGACACTATAATGG 43782 29 100.0 32 ............................. ATATGAATCGTCCACCCTTTTCGGTCGTTGTC 43721 29 100.0 32 ............................. TTTAACAAGCTAGTTCAAACGGTAAACGATAA 43660 29 96.6 32 ............C................ ATATATGTATAGTCAAGGAGCAATAAAAAAGG 43599 29 96.6 32 ............C................ GGCACACACAAGGTGATAGACGAGTATGTAAA 43538 29 96.6 32 ............C................ ATAACTCAACATTGTTATAAACAAAAGGGTAA 43477 29 86.2 32 A...C.......C....A........... ATAACTCAACATTGTTATAAACAAAAGGGTAA 43416 29 89.7 32 A...C.......C................ ATAACTCAACATTGTTATAAACAAAAGGGTAA 43355 29 89.7 0 A...C.............A.......... | ========== ====== ====== ====== ============================= ================================= ================== 31 29 98.2 32 GTATTTCCTGCATACGCGGGAGTGATTCT # Left flank : ACTAACTCTGATAATATTATTGAAGTAGGTGCTATCAAAGTTTCGCATGATGACCAAAAAGAGTTTGATTATTTAGTTCAGCATGCTGGTTCAATTCCAAATAGTATTCAAAAATTAACTGGTATTGATGATACAATGATATCTAAAAATGGCTATGATATCTCATTTGTACTAAAACAATTTGTTGAATTCATTGGTAATGATACTTTAGTAGGTTACAATGTTAATTTTGATATTGATTTTATTAACAATAAACTATTATCGTTGAAATTAGATCCAATTCAAAATAAATATATTGATGTTTTGCCGTTAGTAAAACATGATAATATGTTTATGAGTAGTTATAAGTTAAAAGATGTTGTTTTAAGTTATGGTATTAATGTAAAAACATTTCATAGAGCATTATCAGATGCTGAATCAACGTTAAAACTCTCGACTAAAGTGAATGAATTTGCTAATAAGTTGAAATTAAAACGTTGATATGTCAGACTTTCTTTAGT # Right flank : AAACTTGTTTACACTGACGAGACTATTTAAACTTATGTATATTTACTAGAAAATTATTACTTAAACATAATTAAAAAGAGATGTTTAATCTATGACTCAGTTAATAAAATACGTTTTAATGATCATATTGCTTTCTATGGCTACTACTCTCATCAATGTGATACTAGATGGAGATATCTTTTCATTAAGTTCTTTTATATTTGGATTGATTTTTTGGATGATTATTTCATTAATAGGTTGGACTGTGGTTTTTATAATTTTATACTTTAAGGTTAAGAAGTGAACATTTACTTATTAATAATTTAAAAAAATAACCCCCAAATTGTTGAACAGTTTCCTGTCCAAACTTTTGGGGGTTACATCAACATACTTTTATTTCTTTCTTAATTACTTAGATTTTATTTGTGAGTTCAATAAATTAATGTCGACTTTAGGTAATGATGGTGTGTTATTCATGGCATATGGAATAGTAGATAATATACTATCATCATAGTAAGGAT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTCCTGCATACGCGGGAGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 55107-59281 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPLM01000021.1 Apilactobacillus sp. F582-1 contig21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 55107 29 100.0 32 ............................. TATTGGTGGTGAAAACTACGTTAGCAATTTTG 55168 29 100.0 32 ............................. AGTTATCTCTATTGCCCTTTGTCGTTGCTGTA 55229 29 100.0 32 ............................. CCCTATAAAGCTTTTAAATTGTTCATCTGTGT 55290 29 96.6 30 ............................A ATAACCCAAAATAAAAAGCCCACATAAGTG 55349 29 100.0 32 ............................. CAGTCACAGTCAAATTGCCCTAGTAAATGAAC 55410 29 100.0 32 ............................. TGTTTTTGTAGTTGTAAAATCATTTGTTGCAT 55471 29 100.0 32 ............................. AACTGATACACGGTTTCAGCTTTTGCCCCTGT 55532 29 100.0 32 ............................. AGAAACTGTTGAGAGATAAAAGATAAGCAAAA 55593 29 100.0 32 ............................. TTCACTCACTCTAGGAGCATTTTTAACAATTT 55654 29 100.0 32 ............................. GCATCGCTATATCACGATACATCAATCTTTCT 55715 29 100.0 32 ............................. TCTGCAAGTAGATACATCTCTAAGGGTTGCGA 55776 29 100.0 32 ............................. AATTTGATAAAAATAGCCATTTTAAGAGTTTT 55837 29 100.0 32 ............................. GTCAATATTTTACCTAGATCAGTTGATGTTGC 55898 29 100.0 32 ............................. AATGAGTTTGATTTAGATAACGGTATTAATGC 55959 29 96.6 32 ............................C GTTAAACTCACTTTCAAGCATACGTCCGGGAA 56020 29 100.0 32 ............................. TGGCTGTGAACTTGGGACAGTTGAAACAATAG 56081 29 100.0 32 ............................. AGTGGTTGGATTATCAGCATCTATATATGCTT 56142 29 100.0 32 ............................. ACAATAAACAGAACTGCTTACGCTTATCGTCT 56203 29 100.0 32 ............................. AAAAAAGCTATCATAGCTGACGGCTCAATCCG 56264 29 100.0 32 ............................. GCCATTTAATTACATGTTTTTGCTCGAATTCC 56325 29 100.0 32 ............................. AGGTTGGCCGAAAATTAAATATTAATAGGGGA 56386 29 100.0 32 ............................. AAATACCATAAAAAGATTGTTGGCTGGGTTGA 56447 29 100.0 32 ............................. ACTTGTTTCGCCATTAAAAATTAATATTTGAA 56508 29 100.0 32 ............................. TGAACAGCTAAAAGATGCAGGCTTTAGTGATT 56569 29 100.0 32 ............................. GTATAAGATACAAGTTTACTTCCCAGAACTCA 56630 29 100.0 32 ............................. AAACATTTTTATGATTTTAAAGCTGTAGCAAC 56691 29 100.0 32 ............................. ACTACGCTCCATACAACGTTGCAACATACGCA 56752 29 100.0 32 ............................. GGATTCTTTCTGACACTCTGGACAGTAAGTGT 56813 29 100.0 32 ............................. AGAAACTACAACAACTACAACAATTACAACAG 56874 29 100.0 32 ............................. TTGCCGATGAGTACATTAAAAGCGGAAACGGA 56935 29 100.0 32 ............................. TGTTTCTCGCCAATTTTACATACATGATTACT 56996 29 100.0 32 ............................. GGAACAATGACCGCTGAACAAAAGCGGAACAA 57057 29 100.0 32 ............................. CTGTAGTCATGTCCTGTTTCAAATTTGATAAT 57118 29 100.0 32 ............................. TGTTATCGCTAACTGCTTGTTTTAAAGTGTCA 57179 29 100.0 32 ............................. GTTACACATAAATAACCTGATATGTTAGATTG 57240 29 100.0 32 ............................. GCAACGCCCTTGTTATCATTACTATTAACATC 57301 29 100.0 32 ............................. ATAGGATATGATGACCTAAACGAAACTGAACA 57362 29 100.0 32 ............................. ACTCAGCTACACACTATACTATCGTGATACCA 57423 29 100.0 32 ............................. GACGTATAAACAAGTATCTGTTAATCCTGATA 57484 29 100.0 32 ............................. AATCTGAACTGTATAGTAGTGGTGTGGTGTGC 57545 29 100.0 32 ............................. GCCAATCAAGTTGGTGCGCTTTTTGGTAGCAG 57606 29 96.6 32 ............................C TACTTAAACGACCTTATATGCTCTTTAATTTA 57667 29 100.0 32 ............................. TGTTGAGATACAAGCAAGTGGGCGGACTAGCA 57728 29 100.0 32 ............................. GCAGCTACTAGAGTTTTAATCGAATATGTTAA 57789 29 100.0 32 ............................. ATGTATTGATTTGAGACATATTTGTTCATTAT 57850 29 100.0 32 ............................. ACTCAAATGTACAGTTGAATATCACTGGTCAA 57911 29 100.0 32 ............................. CATTTCATCTCTTTTATGACTATCAAATTTTG 57972 29 100.0 32 ............................. ATATCAACGTTTTCCATACCTGCTAAGACACG 58033 29 100.0 32 ............................. CATAATGGTATAACCTCTACTTTAATAGGTAT 58094 29 100.0 32 ............................. TTGATGAGATTGTTCAAATTATTTCAGAACGT 58155 29 100.0 32 ............................. TTTATTAGCTTGCTTACTCATGGATTTGAGTT 58216 29 100.0 32 ............................. CGTCCATTGACGAGTTGGGACACTCTTACCAT 58277 29 96.6 32 ............................C AAACGCAAATCCATGTTTGGAAACCTTTCAGA 58338 29 100.0 32 ............................. GCCCACTATAAAGGTTTTAAAGCTGGAATTGT 58399 29 96.6 32 ............................G TCAACATCGGAGTTTGGAACTTCAATCAAGTA 58460 29 100.0 32 ............................. TGAAAGCAGACTTAAAGATTTTACTGTAGATG 58521 29 100.0 32 ............................. GGAAACATTCCAATCAAGACTTAAACGTGCTT 58582 29 100.0 32 ............................. AATGGCACAGGTGCTGTTAGACCAAGCGTTGA 58643 29 100.0 32 ............................. TTCGCTTAACATAGCTTTTAATTTGGCCTTTT 58704 29 100.0 32 ............................. GGTCGTTTGTGCAATACCGCATGGTCACCCTT 58765 29 100.0 32 ............................. GAGTTTGATATTGGTACTTATAACATTACTTT 58826 29 100.0 32 ............................. TATCAAGATATGAGAGACCACGATAGAACGAA 58887 29 100.0 32 ............................. TCCCAATATTGAGATTTAGAACGATAGTGCCA 58948 29 100.0 32 ............................. GGTACAGTGGTTAACAATTTGATCAACATTTT 59009 29 100.0 32 ............................. TACACTTAACTCTAGCAGGTCTATCAAAAAAG 59070 29 100.0 32 ............................. AAATGTTGGAAAAAAGGTAACAAAAGGTAACC 59131 29 100.0 32 ............................. GATATGCTCCCCACCTATCTAGGTGCTGAAAC 59192 29 100.0 32 ............................. TAGTGCTGCAAACTATGATTTTGAAATTGGAA 59253 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 69 29 99.8 32 GTATTTCCTGCACACGCAGGAGTGATTCT # Left flank : TAAATAATCATCTGGAACGAAACCCTTACTAAATAACCTTTCCATTAACATTTCATCTAAATCACCCAAGCCTTGATAACTTGGCTTAGTTTGAAATGCCGGAGTAGCTTTTCCTATATCATGTACTAGCCCAGTAAACGCGACTACTTGTTTAGCAGCTGAAGAATCTAATTGATTTACAACTGCCTTTTGTATTATTTTTCTTTGATGTTCGCTTAAATAATGCTCATATAACATCGAAATAACGAATTTGGTATCTAACAAATGTTGAGATAATGGCAACCATTTTGACGTGCCATCCAGGCCTCTAGCTTTTTTAGCCCATAATATATTTTTATCCATGTTTTACCTCATTTTTTAAATTTTATTTATAAAACGATTATAATTCTACTATAAAATTATCATGTTTAAAAATTTTCATAATATGTTAGTATAATAAAAGTGAATGTATTTTGCATAAACTAAAATATGAAACGTTGCAAAATCAACGTTTCTTTAGT # Right flank : TAGTGCTGCAAACTATGATTTTGAAATTGGAAGTATTTCCTGCACACG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTCCTGCACACGCAGGAGTGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.50,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //