Array 1 1059113-1062313 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056284.1 Citrobacter sp. RHBSTW-00859 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1059113 29 100.0 32 ............................. TACGCGGAAGTAGGCCTGCAGCTTACGCTGGG 1059174 29 100.0 32 ............................. CCGGGTGAGTTGGCGCTATCTCCGGCGAGACA 1059235 29 100.0 32 ............................. GCGGCATATAACTTCGGCGGCTTGTCTCTTAG 1059296 29 100.0 32 ............................. GATATGTATTGCCCAGCCAAGCCGGTAACTAT 1059357 29 100.0 32 ............................. CGCATCATCACCTCAGACAAATACGCAGACGT 1059418 29 100.0 32 ............................. CATATTCACGGCATCGCGCAACGGTGTGCGCT 1059479 29 100.0 32 ............................. GTTGGCGAAGTTGTAGTAAATATCACTACGGT 1059540 29 100.0 32 ............................. CAGGAGTGTTCGACCTTGACGCGATCAGGAGT 1059601 29 100.0 32 ............................. GCTGGGTATTCCCTATACAGCAACGGAAACTA 1059662 29 100.0 32 ............................. GTTATTGATGTTCAGCCCGGTACGCGCACCCA 1059723 29 100.0 32 ............................. CCGCGACGCATACCAAACATCTTATTCACGTC 1059784 29 100.0 32 ............................. CTCGTTAAACTTGCTCTCCCATTGCTTGCCGA 1059845 29 100.0 32 ............................. CTGCCCCGTCTGCGTCGGGCGGGCAGGATCGG 1059906 29 100.0 32 ............................. TCCGAACCGGACAACTTGCGACAATTGGCGAG 1059967 29 100.0 32 ............................. TTTATTTATTGCGGTGATTTCAGTCGTTTCCT 1060028 29 100.0 32 ............................. CTTATCCACCCCGGTTATGATGGCCTTTAACT 1060089 29 100.0 32 ............................. CATGAGCCGCCCGGCTGATGGCGGACGTTTTG 1060150 29 100.0 32 ............................. CTGTATCACGTGATCGCCACGTCAACGCAGTA 1060211 29 100.0 32 ............................. GAAACGACCCGCGCGAATGGTGCGGGAATGAC 1060272 29 100.0 32 ............................. TTTCCCGTCCTAAACCTGATCGCGTTCTCTGA 1060333 29 100.0 32 ............................. CTTGAGCGTCCTGAACTATTTAGGATTTTAGA 1060394 29 100.0 32 ............................. TCAGGGAGTAACCGGGACTGGAGGATTCCAGA 1060455 29 100.0 32 ............................. GGGTACGTCGGTTACCCAATCCGAGGTTCGAT 1060516 29 100.0 32 ............................. CCCAACAGCAAATTCATGTAAATCAGGATTGC 1060577 29 100.0 32 ............................. AAAAAAACATGCAGAGGATTTCATTAAACATG 1060638 29 100.0 32 ............................. TTTCAACGTGCGTTCTGCAACTTGGCGGTCCT 1060699 29 100.0 32 ............................. TCTCACATGTTGTTAAATCCCATACTTTAGAA 1060760 29 100.0 32 ............................. CACTGGTTCATCCTGATCCCCTGCATGTTAGT 1060821 29 100.0 32 ............................. TCTTCTTGATTCCTTCAGGTTCTGAAGATCGC 1060882 29 100.0 32 ............................. AATTTTCAGACCGTTGATGTTTACGGTTCCGG 1060943 29 100.0 32 ............................. GCTGAATTCTGGCCTTCAAACGTGCAGCGAGA 1061004 29 100.0 32 ............................. AGCTGCCACTGCGGCAGCTCTTTCGCGTTACA 1061065 29 100.0 32 ............................. GCCGAGGCGATAGCGACGATGACGTTTGAAAC 1061126 29 100.0 32 ............................. AGAGAGTTTCACCGGCCGCTATATTCCCTGCG 1061187 29 100.0 32 ............................. CCCGGTACAAGGGCTAAGTTCTGCCGGCGTAG 1061248 29 100.0 32 ............................. CAATGGAAGAACATCTACTACCAGATTCTCGT 1061309 29 100.0 32 ............................. GGGGAGTGAGATGGGCAGGCCAGTAATAGCAG 1061370 29 100.0 32 ............................. GCGAGGGGGAATCGTGCTGGATTGTAGATATG 1061431 29 100.0 32 ............................. ATTAATGGATTGAATCCATTCGATCATGATGG 1061492 29 100.0 32 ............................. TTTCGGGGTCGAAGTTGCTGGGCGCGAATCGG 1061553 29 100.0 32 ............................. GCTGGGACATCATGTTCATAATTCAGGATGTA 1061614 29 100.0 32 ............................. TAAATTATTCGATATTAATAAAAACATGGAAA 1061675 29 100.0 32 ............................. GGCAAACGAGAAAACCCCTCATAATCGTTTCT 1061736 29 100.0 32 ............................. AACCACGCTGTCGAACGCCTCGCCGGTGTCGG 1061797 29 100.0 32 ............................. CGCCGGACCTCAGAGAACCGGCGCATGCATAC 1061858 29 100.0 32 ............................. CATTACAATGTACGCCAACATGGATCCTGTAT 1061919 29 100.0 32 ............................. GCTGACGGTGCGCCAGCGCCGGTAGTTCCAGG 1061980 29 100.0 32 ............................. CGGCTCAGAAACGGCTACTGCGACCGTTAGAG 1062041 29 100.0 32 ............................. CTCATAGTATTAAGCATGAGATTGACACAACC 1062102 29 100.0 32 ............................. AATCCTGCGTGACGCCGGACTTTCCCGCACCC 1062163 29 100.0 32 ............................. GAAAAGTACAACCAGACGAAAGAGGCGTTTAA 1062224 29 100.0 32 ............................. CGGAGGACGCGGCCAAAATTGCTCGTAATAAT 1062285 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================ ================== 53 29 99.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAAGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAATTTTTTCTACGGCTATAACCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGGAGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //