Array 1 604-40 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGLBN010000014.1 Enterococcus faecalis strain R48 NODE_14_length_38405_cov_80.083412, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 603 36 100.0 29 .................................... TGCTGTTTCTTTACATATTTGTACGTACT 538 36 100.0 30 .................................... ATCTCCTTTAATACATTTTTATTAAAGTAT 472 36 100.0 30 .................................... GTTAGCCATCTCATAGTTTAATGCTTCATT 406 36 100.0 30 .................................... TATTAATGACATTTTTATATAACTAATAAG 340 36 100.0 30 .................................... CAAGCTGGTGATATTGTTGAAGTAGATGTT 274 36 100.0 30 .................................... TGCTTCCAGTAACTTCTTGCACTTTATAAC 208 36 100.0 30 .................................... CTGTTGCAGAAGATGCAGGAAAGCAAGTAC 142 36 100.0 31 .................................... ACGCTTTTTCCTAACAAGTACATCGACTGCA 75 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 9 36 100.0 30 GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : GCCAGATTGGACTTGACTCAGACCTGTTCCGCTTCCGCCACCTTGGACATTAATAAATCTTCCCGGATTTTGGCTTTGATATTCCTCACTCGCTGTCTCTACTAATGGTTGTAAAGCTGATGAGCCTACCGCTGTGATGGATTCACCACGATCAATCCATTTTGCACATCCTGTTAAAGTAAGTATACTTGCCAAACCAATAAATAATAGCAATCTTTTTTTCATCGATTCATTATTCCTCCAATTAATTTCAATCTATTCCATTTTACCATTATATGTAGGACTTGAAAATTATAAGTTATCAATTTGTTGGTACAACTGAGAAAACTCTTAAATTAAATAACAAAAAGTATCTGAAGAAGCCAATTTGGCTGTTGCTTCAGATACAAACAATTATGCTAGAAAGATGTCTATATTTAAGAATTTGGTGGGAATGACTTTATTTGAAAGATTATTGGGAGTACAAAAATAATTTATTCATGGTATCTCCTTTCAATAAA # Right flank : CCAGAATTGCATTCGATAACTCTTCTTGATCGTTTTACTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 278878-279903 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGLBN010000005.1 Enterococcus faecalis strain R48 NODE_5_length_279944_cov_88.868555, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 278878 36 100.0 30 .................................... TTTTAAAATCTACCTGAGTCCCTGCAGTTT 278944 36 100.0 30 .................................... GAGTCCACATCGTTATATACTTGCCCGACA 279010 36 100.0 30 .................................... GTACCTCTATGGAATCTGGGCGAATCATTT 279076 36 100.0 30 .................................... TTCAACTGGTGTTTTAATTTTCCTTAGCTG 279142 36 100.0 30 .................................... CGACTCTGTGGCGATTTCCATGCGGGACTA 279208 36 100.0 30 .................................... AGGTGGGTAGGGTGGTAGGCAACCTCATTG 279274 36 100.0 30 .................................... CAAGCCCTCAACTATCTTGTAACTCGATGG 279340 36 100.0 30 .................................... AAACTGGGGTTAATTGATTGACTTTCCCCC 279406 36 100.0 30 .................................... TTGAATCCCAAAGTCCACTAAAGAATTCTT 279472 36 100.0 30 .................................... ATTTGCCAGATCCACAAGCAAAGGTTGGCT 279538 36 100.0 30 .................................... ACTATTCTAACGCGGGTTGGCAAGATATGG 279604 36 100.0 30 .................................... CCCTAACAATATTTAGATATTGTGGTTTAT 279670 36 100.0 30 .................................... CTACACCCTTCGTTAAAGTACCTGTTAACT 279736 36 100.0 30 .................................... GATCAAGAAGAGTTATCGAATGCAATTCTG 279802 36 100.0 30 .................................... TGTGGAACTGTGAATCGTTGGTCTACCCAA 279868 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 100.0 30 GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Left flank : ATCCACTATTTATTTCAACAATTAAAAGAAATAGCACGGGAAACAAATCAGTTAAAGTTTTTTATTTTTAGTAATCGAAGTTTGCCTTTGGCTTATACAGAAGAAGATATTGAGAAAACGATTTTGTTATACGATCAGTACCAACAGTTGCCAGCCTTTGATATTTTTCGTCAAAGTATTGAGCGTCATTATCCCGATGAATTTGTTTGGACGAATCAGCAATTGGTTGATGCTTTTTATCGAGTCTGTCATTTTGTTGGTGATCAGTATACAAAAAATTATCTTTTACCTAGAGATATGATATTATTAAAATTGTTAAAAGAATTGTTAGATGACAATAGTGAGAGTGTCGAGACGTCGATGGGAAAGCTCACTGTGTTGGAAGAACAATATTTTCGTGAACGGTTATTGTGGAAAGAGTGAATCTGGGATTTTGACCGCGTAAAGTTATATTTTTTGTCAAAAAGCTTACTAATGAGATTTCAAATTTTAAATTTGAG # Right flank : GATCAAGAAGAGTTATCGAATGCAATTCTGGTTTTTGTACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //