Array 1 45113-47972 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUL01000003.1 Ligilactobacillus salivarius strain FXJCJ23M1 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45113 36 100.0 30 .................................... TTTCAGTATTAGTTGTTGTAACTTCCTTAG 45179 36 100.0 30 .................................... ATAGATATTTTGTCTATTAAATGAGCTAAA 45245 36 100.0 30 .................................... AAAATGCCACAACAGTAAAACCCGTGGATA 45311 36 100.0 30 .................................... CTTTATCATTGGCAAATAGAACAAATTTCA 45377 36 100.0 30 .................................... TTGGCTAACATGGTTACTGCTATCGACAAA 45443 36 97.2 30 .................................G.. TCATCCAGGTAGTGAGAGACATGCTATTCA 45509 36 91.7 30 .A..........G...............A....... ATGTTTTCTTAATCGTGCCCCATACCACGC 45575 36 100.0 30 .................................... TCATCCAGGTAGTGAGATACATGCTATTCA 45641 36 100.0 30 .................................... ATGTTTTCTTAATCGTGCCCCATACCACGC 45707 36 100.0 30 .................................... ATAACGATGTTTTAGTTAGATCTTTGCCTA 45773 36 100.0 30 .................................... TGAACGAAGTAGTAATTGGTTATAGAGACC 45839 36 97.2 30 .................................C.. TGAACGAAGTAGTAATTGGTCATAGAGACC 45905 36 97.2 30 ................C................... TCGTGTTAAACATAAGGATGAAGTTTCAGA 45971 36 100.0 30 .................................... TCGTGTTAAACATAAGGATGAAGTTTCAGA 46037 36 100.0 30 .................................... ATTAATTTTGGTAGTACCAGCATAACAGCA 46103 36 91.7 30 ...............................C.CT. GGAATTAACAACTTACGGGCATAGCGGATA 46169 36 94.4 30 ..............G..................C.. TCGTGTTAAACATAAGGATGAAGTTTCAGA 46235 36 100.0 30 .................................... GGAATTAACAACTTACGGTCATAGCTGATA 46301 36 100.0 30 .................................... TTTTAGCGGAGGATATTGGCTAATTAAACA 46367 36 97.2 30 .................................C.. TTTTAGCGGAGGATATTGGCTACTTAAACA 46433 36 97.2 30 ..............G..................... GGTTTGTCAAGTTTGTTGTGTTATCATCAC 46499 36 100.0 30 .................................... ACACGTTGGCGGTACTGTTTGCTTCGCTTT 46565 36 100.0 30 .................................... GGTTTGTCAAGTTTGTTGTGTTATCATCAC 46631 36 97.2 30 .................................C.. GGTTTGTCAAGTTTGTTGTGGTATCATCAC 46697 36 91.7 30 ...........G...G...................T CTTAGGCGCCATCCGTGGTATGACAGCATG 46763 36 100.0 30 .................................... CTTAGGCGCCATCCGTGGTATGACAGCATG 46829 36 100.0 30 .................................... ACAATTTTATATTAGGTTCATTGACAAAGA 46895 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 46961 36 100.0 30 .................................... AGATGTTTTAACGTTTATCAACTACAACAG 47027 36 100.0 30 .................................... AGATGTCGGTGGAATATAGCCCATGAACTG 47093 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 47159 36 100.0 30 .................................... GTATGCAAATCTATAATGCTGCTTATTATA 47225 36 100.0 30 .................................... CCTACTTCTTTTTTATTAATCGCATTATTG 47291 36 100.0 30 .................................... TTAACCATCGCTAACATTGGTCGAGCTACT 47357 36 100.0 30 .................................... GAAATAAAAAAGCCCAGAGCATAAAGCCCT 47423 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 47489 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 47555 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 47621 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 47687 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [47719] 47753 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 47871 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 47937 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 43 36 97.6 31 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [6-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //