Array 1 17576-16468 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGSU01000020.1 Acinetobacter bouvetii strain WCHABo060081 20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 17575 28 100.0 32 ............................ TTTATGTGCTTTCTGATTAGCGCATGTATGAC 17515 28 100.0 32 ............................ ACTAAAGCAGGCTGCAAATCAGTAGTAAATGA 17455 28 100.0 32 ............................ TGTATAATCACCCGTATTTACAGTGTCATTAT 17395 28 100.0 32 ............................ TTGAAGCAATTTAGCTGGCGATGCTTTGATTT 17335 28 100.0 32 ............................ ACCGTAAGAATGAACGATAAAGAACAGGAAAT 17275 28 100.0 32 ............................ TTAAATGGGTTGAGTATGCCCCTCAATACATG 17215 28 100.0 32 ............................ TATTTATTGTGACTGACCACTGGAGACAATAA 17155 28 100.0 32 ............................ GATTGAAATGTCTACTCAAATGAATGGCATGA 17095 28 100.0 32 ............................ ATTGAAAGCCAGTACAACTCACCTTTTGAAAA 17035 28 100.0 32 ............................ TAGTAGACTGAATTAAGATCACACCAGGATAA 16975 28 100.0 32 ............................ AATTACCTTTATGCTCAATGTTTGGAGAACGA 16915 28 100.0 32 ............................ ACTCAAAAGCTGCTGGACAAAGCTGTTTCTGC 16855 28 100.0 32 ............................ CTACGTGTTCAGCATTGTTTCCGCTGTCATTT 16795 28 100.0 32 ............................ AGTAGACCGTTTTCATTAGATTTTCTGTTCAG 16735 28 100.0 32 ............................ AAGATAACTTTTCTGAAACTTTATTAACAGCA 16675 28 100.0 32 ............................ GGGGATAAATTAGATATTGACTATCGCAAGAT 16615 28 96.4 32 .................A.......... TTAATCAACAAAACGCTACTTCTCAACAAATT 16555 28 100.0 32 ............................ TTGTTCTTGAGCTGCTTGACGTATTTGATAAT 16495 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 99.8 32 GTTCACTGCCATACAGGCAGCTTAGAAA # Left flank : TTCATGTTGTTGGTGAGGTTGATACTCATCGAGTAAAGCCTACAGATATTGAGGTCATCCATATCGAACGAATAAAATAAAATTTAAGCTATTTGGGATTGTTCAAAAAATTTCAAGCCAGTCTTAAGTATATTGATTAAAGCCATTCTAGGTTTTTCGTACACTAGAATGGCTTTAATCTTTTGAGGGCGTCACGATTTTAAAGTAAGACTTAGTGGATTGTGAGTCAATGTCAGCTGCTAGTGATCAATGAATCGGTTTAGGATCGCATCTGAGTGTACATATATTGAGTTTACTATTTCCTTTTGATCTTGCTCACTTTTATTTGGAAATTGAGTTATATTTATTTGACGGTGAAAGACGATTTTACCCAATATTTTTTCGCTCATTAATAGATTAGTAAAATCAATAAGTTGTATTTATGCTTGGAAAATTGGGTTATACTTCTTTTTTTAATATTAAGTCATTGTTATAAAAGTAGTTTAGAGTATTGAATTACT # Right flank : TTCTGCATATGGCTTCGCCGCCTGAACACCGTGTTCACTATTTATAAGAAGCTGAATTAAGCCGTTCACTTTTCTAAAAGATAGAGCGCCGTATGGCGCTCTATCTTAGGTTTCAAATGTCTTAATCTGCGCTATTATTTTAAGCTGCAGGTATTTACAGGTTTGCCTTGCTCAACGGAGTTGATAAAGTCTCCAATCAGGAATTCACTTTGTCTTAAGGAGTCACGATGATCTCCATTCTTGACGGGGTGAAACGCCATCGGTTTTCGCTCTTTACATACTTGTTGATAATAAGCGTAGGTTCCGCGGTAATCGACTAGCTGATCTTTCTCGCCTTGAACAAGTAAAAGAGGCACATTGGGTGTCATATTTTCAATAGACTGTTTTTTTAAATAGTTTGTCAGAGGCGTCAAATTAGCATTAGATTTGAAAACAGTTTTAGGTGCTTCTTTTAGATCAGATTGCAACTCAGATAAACAGCGATTGCGAGCATAGTTCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 15224-16031 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGSU01000010.1 Acinetobacter bouvetii strain WCHABo060081 10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 15224 28 100.0 32 ............................ ATCTTCTTAGCCAATTGCTGCTGCTCAGAAAA 15284 28 100.0 32 ............................ AACATCATTGATTGTTCCCAACCAAAAATATT 15344 28 100.0 32 ............................ AACTATCCAATCTATCAAGCGCTGATCCGACA 15404 28 100.0 32 ............................ TGATATGAAACAGATTGCTGAATTTTGTCATG 15464 28 100.0 32 ............................ GAGCAACTGTTCAACAGCTACAGATAGAGCTA 15524 28 100.0 32 ............................ ATCAAAAAATCCAATGATTTTAGAGCTTTCTA 15584 28 100.0 32 ............................ TTCGAAGCGCTCAACTTCTCTGAATAGTATTT 15644 28 100.0 32 ............................ AGAGTTGAATATTTCGAATTCGGAGTATGATA 15704 28 100.0 32 ............................ TCCTGCTGAAAGCGGGCATTTAACAGTAAATC 15764 28 100.0 32 ............................ AAGTACAATTATCAGAAAAAACATTAGTAGAA 15824 28 100.0 32 ............................ ATTAATAACGGGTGCATTTGAAGGATCGCCAG 15884 28 100.0 32 ............................ ACTGGAGATAACAATGAAATATTTTCTTGCTT 15944 28 100.0 32 ............................ AACAACTGAAGAATCTACAGGGACTGGTGAAA 16004 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GATATACGAAAATGGCTAGAACGTTTAGAAGATTATGTACATATTACTTCTTCTATTCGAGAAGTACCTAAAGAGATTAAAGGCTATGCAATCTATAAACGTAAACAAGTGAAAACCAATGCTCAACGTTTAGCGCGCCATCGTGTAAAACGTGGTGATATTGGTTTTGATGAAGCATTGGCTCGTTATAGCAATGTAGTGACTACAACGGCACTACCTTATATAGAGCTGAAAAGTTTAAGCAATTCGACAGCTGAGGATGAAAAGCGTTTTAAATTGTTTATTGAAAAGCAATCTGCGACAAAATCTGAATCTCAGGTTTTTAGCACTTATGGTTTAAGTTTGACCTCATCTGTACCCGAATTTTAACCCAATATTTTTCTACTCTTTAACAGTATAATAAAATCAATAGGTTATGATGGTGGTTTGAAACTTGGGTCTTTTATAGATTTTAAGGGTTAAGCCACTGTTATAGCTTTATTTTTTTGCTATGAACTAAC # Right flank : ATTTTTAGCTAGGATCCTCAACGGTTTAGTTAGGATGGGCGTCTATCAGTAAATGTTAGCCTTAGATCTCTCATGTTTTCACCATTTAGGTAGAATGAATAAGGATGAATATCTTGAGATTTTCTAAGTTTAAAATGAGTTTCATTCATTTTGAGCACTTCACAGGTTTTATAAAATAACTGATGTTCTTGCCCCAATAGCAAAATAAAATGCCTTAGTGATGAATTTTTAAGCCAAATATAGAATTTGATTGAGGCGCTTAACTGTCAAATTTCTACAGGAATTATTTAATTATTACTCAGTTTTATTTTTTATAAATTGTTGTATTTTATGTATATAAAAAGAAATTAGAAAAGTATTCTCAATAATTTTATTTAGGGTTATTAGAATTAATGTATCAAAGATCTGCTAGCCAGCTTTCCTAATGAATATCCAGCGTTGATGCGATGAAATTCAATTAGTGAATTTTATTCATCTTAACTTTAGATTAAATCATTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //