Array 1 202662-201962 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK036667.1 Klebsiella variicola strain UCI 18 adjcN-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 202661 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 202600 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 202539 29 100.0 32 ............................. AAATATAATGGGAATTGCCCCGCTCCGGCGGG 202478 29 100.0 32 ............................. CGGGATCGCTGCCACCAAACGGCTGATAATGG 202417 29 100.0 32 ............................. CTCGCCCCAGTCCGGTTTGCTCATCAACTACT 202356 29 100.0 32 ............................. GCGGCAACGCCTCACAGATGCACAAATAAATT 202295 29 100.0 32 ............................. CGAAGACACGCTGGCACAGATTGCCGAGCTAA 202234 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 202173 29 100.0 32 ............................. TTCAATGCGGCGATAACTTCCTTTAAATCCAC 202112 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 202051 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 201990 28 82.8 0 ...........AT..-.........G..C | T [201977] ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AAGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTAGTAGGGCGGTGAGCCGTCTTGCTGTTCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTGAGGGAGTGGATAATTGACTGCACATCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCGTTGTTTTCCCGTCGAACGCGCCGGAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGACCTCCCATGATTAACGAATATAAAACCGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGCACCTGGTCGATAAAAGGTGATGGCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCTCCGCATCCGCAGCAGAAACAAATCCAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCTTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 204682-202762 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK036667.1 Klebsiella variicola strain UCI 18 adjcN-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 204681 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 204620 29 100.0 32 ............................. TCGACAGCCGTGACCATGATGCGCTGTCGAGA 204559 29 100.0 32 ............................. TTCGATGCTGACCTTAATATTGATTACGGTGA 204498 29 100.0 32 ............................. CATTTCAATAACGCGACAGTGTTCTACTGTTA 204437 29 100.0 32 ............................. AATTGGAGAGGTTTAATGTTCGGGATGCTGAC 204376 29 100.0 32 ............................. TTGGCTTACCCGGGAGATCAGTAACCCGCAGT 204315 29 100.0 32 ............................. GTAGTGAACATCAGAGCCAATGGTGATCTGCA 204254 29 100.0 32 ............................. TCCCGCCTCAACAATCCCCAGCGCATGACCAT 204193 29 100.0 32 ............................. TGTCCTCAATCTCCCACACTCGGCATGCATAT 204132 29 100.0 32 ............................. CGTGGTTTTGAATGGCAAATCGTCTTCTGACG 204071 29 100.0 32 ............................. GCGATAGAAACAGAGGGGTATTTTGGGCGCGG 204010 29 100.0 32 ............................. GGTTCGGCGGCGACGCTAAATCGGCGCAGGCG 203949 29 100.0 32 ............................. TTTTTAAAAAGGCGATAGAAACAGAGGGGTAT 203888 29 100.0 32 ............................. GTATAGAGAACGCCGCACAGCGCATTAACCGT 203827 29 100.0 32 ............................. GTGGTACGCCAGTTGTCCCGCTCCTGCTGCGC 203766 29 100.0 32 ............................. TTCGGCGACGGCTACGAGCAGGTCGCGCCGGA 203705 29 100.0 32 ............................. CATTATCGGGGCCGGTGAAATGCCGCGCCCTC 203644 29 100.0 32 ............................. CCCCATTACGGGAGGTGCTCTTGCCTGATAAC 203583 29 100.0 32 ............................. GTTGAACACTCAGGCGCCCTTGCCGTGAGCTC 203522 29 100.0 32 ............................. GGTTCATCAATCGCTCTCGTTCTGCCCGTTGA 203461 29 100.0 32 ............................. GCGATAGCGAATACTCAACATCGCAATATGAC 203400 29 100.0 32 ............................. CGCTGCCAGTGCAGCGGGACGGGGAAGACACT 203339 29 100.0 32 ............................. ATCGCCGGGGCGCTCAATACCGCCGCACTGGG 203278 29 100.0 32 ............................. CTCGTAGTGGTCAGGAGACAGAGTGATGGCAG 203217 29 100.0 32 ............................. GCGCAGCCGCTGAAAGTATCAGGTACTAAGGC 203156 29 100.0 32 ............................. TAGTAGGGCGGTGAGCCGTCTTGCTGTTCGAA 203095 29 100.0 32 ............................. CTTGAGGGAGTGGATAATTGACTGCACATCCT 203034 29 100.0 32 ............................. GCTCGTTGTTTTCCCGTCGAACGCGCCGGAAA 202973 29 100.0 32 ............................. GACCTCCCATGATTAACGAATATAAAACCGTG 202912 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 202851 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 202790 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 32 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGACGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTAGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTGCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGCACCTGGTCGATAAAAGGTGATGGCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCTCCGCATCCGCAGCAGAAACAAATCCAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATATAATGGGAATTGCCCCGCTCCGGCGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGATCGCTGCCACCAAACGGCTGATAATGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCGCCCCAGTCCGGTTTGCTCATCAACTACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGCAACGCCTCACAGATGCACAAATAAATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //