Array 1 267225-268306 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMQT01000012.1 Aureimonas sp. Leaf454 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 267225 32 100.0 33 ................................ CGTGAAGACGATCGGTTTCGACCGAGGCACCCA 267290 32 100.0 35 ................................ TCGACGACGAGGCTCGGATGATAGCCGAATTCCGT 267357 32 100.0 33 ................................ ATGACGATGGACGGCGGCGCGACCTGGACGCCC 267422 32 100.0 34 ................................ CCGAAGGTCTTCCGGCATGTCTCGGGCGTGTGAT 267488 32 100.0 34 ................................ TTGATCGCCTCGCGGATGAGATCGAGGCGGTGCT 267554 32 100.0 34 ................................ TACATCAACGGGCTGAACAACGTCCTGCGCGGTT 267620 32 96.9 34 .........T...................... GGCGACATGGTCGACACCGTCACCCGCACGCAGC 267686 32 96.9 32 .........T...................... TCCAGCGCGACAGCGAGAAGGCGAACAACCTC 267750 32 96.9 34 .........T...................... ACCTACAAGCTCCCGGAAGCGCGCAAGCTCGCGA 267816 32 96.9 33 .........T...................... CAGGTAGGCGCGCGCGGCCGCCACGATGCCGGC 267881 32 100.0 33 ................................ GCTTGGGCACCGAGCCGGCTGGCCGACGCCGAA 267946 32 100.0 33 ................................ TCCACGACGAGGCTCGGATGATAGCCGAATTCC 268011 32 100.0 35 ................................ ATGAACCACACAGCCGCGCGTGTGTCCGAGGCGAT 268078 32 100.0 34 ................................ AGGTCTATGGCATCGAGGAGGCCGTTTGATGGGC 268144 32 100.0 35 ................................ TTCCAGCCGCGGCGGACCTTGTCGCCCGTGACCGG 268211 31 96.9 33 .............-.................. TTGCCGTCGCGCGTCCGGTAGAACTTGCCGGCC 268275 32 87.5 0 ...........T.....C...C.......G.. | ========== ====== ====== ====== ================================ =================================== ================== 17 32 98.4 34 GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC # Left flank : TTCTGGAAATAGGAGCACCGCGATGCTGGTCCTCGTCACCTATGACGTGAAGACGAGCGAGCCCGGCGGCGCGAAGCGGCTGCGGCAAGTGGCGAAGGCCTGCCGCGACGTCGGCCAACGGGTGCAGTATTCAGTCTTCGAGATCGAGGTGGATCCGGCCGAGTGGACGCGCCTCAAGGCGCGCCTCGAAACGATCATCGACCCCGACCAGGACAGCCTGCGCTACTATCACCTCGGCAGCGGCGGCCAGCGCCGTGTCGAGCATGTCGGCGCCAAGCCTTCGACGGATCTCGGCGGCGTGCTGATCGTGTGAACAGTTTGGCGCGAACGCCAAGCGTGTCGCCGTTTCCCGGCTGGTTCGCTCCAGACCGTGCTCTTTGAAATCGTGAAGCTTATTGGCGCCGGCGCGGCATGCGCAAGGAGCGCGGGGCGACGGATGCCGGGAGTTCGCGCAAGCCGCGCGCTTTCTTGATCGCAGCCAATGGCTTAGATGGATGGCA # Right flank : CTATCTGCATGTGGTGCAACGCCAAGTAAACGACGTTGCACCTTGCACAAGCCCGGGCCTTGGCAGCAGACTGCGCTTGGCTAGAGGGTCCAGATTGACCAATTCCACTGCGGGCATAGGGTCGACATCGATACACGCCACTGGTACACACGGCGACTGAAAGCGGCTTCAGAACCCTTGTTTTCTGGGCTTTTCGGATGTGTTTGGGAGAATCCCTTCTTCTCCGCCAGACCTCCTGGGCAAGCCCCTGTTCTGCCGTGATGTTTCGCGGAAAGTGACGCTAGATGCCAGCGCGGCGACGCGGTGCATGGCTGAGGCTGGATAGTCCGCATCCTGACGTCACGCGAGGCTACACCGCGGATCGTTGGCGCCCGCGATCCCCAACGTCCGGACCGGCTGCGCGGTCTGCCGGCGGCGCGTTCCGCGACGGGCTTTCGTCGGAGCATGCCAACAGCGCATTCCGAAAGGATCGGTTGCCGTCGACGGGCGGATCTGCGAGG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC # Alternate repeat : GTCGCCCCTTGCGCAGGGGCGTGGATCGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.70,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //