Array 1 1-477 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQCS01000112.1 Clostridium sp. 3-3 scaffold112, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 1 28 96.4 36 ..............A............. AGTATGTTTGAAATCCTTTATGTACATAAAACAATC 65 28 96.4 36 ..............A............. AAGCTATAAAGAAGAAAATAGGGATTTACAAAGCAA 129 28 100.0 36 ............................ TTGTTTCTGGTAGTCCTAATTTTGTTTTAGCCATAA 193 28 100.0 36 ............................ TGTAGAACCTATATGTTACACTGTAAAAAGTAGTAT 257 28 100.0 36 ............................ GAAAAAATAACTGCTAGTGATGATAACTGGTAAATA 321 28 100.0 37 ............................ GTGCTACGGTCAACATTGCCTTTGCATTTGCACTTAG 386 28 100.0 36 ............................ TATATTGATGAAACAGGGTTTCATATGCCTACCTAC 450 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ===================================== ================== 8 28 99.1 36 GTTTTATCTTAACTTGTGGAATATAAAG # Left flank : | # Right flank : GCGAAAATAGTTTATAAAAAAACTTAATAATAACATAAGTTTTATCTTAACTTGAGTTCATGTGCTAATCCTTTAGTAAATGCGATTACAAAAAATTTGCTTGCACAATATGTTACTGTATTTGGAACAAGAGTATATCCTCCGGCAGAAGAAATATTTATAAGGGTTGTGCCTTCAACATCTTTATAATCGTGAACAAATAATGAGGATAAAATAGTAACAGCTTTAACATTAAGATTAATCATTGTTTCAATTTTGTTTAAGTTCTGATTTGCCACAATATCATAATTGCCAAATCCGGCATTATTGATTAATGTTTCAATATTGTAATCTTTCAAACTGTTGTAAAGTTCGTATACATTATCTATGACTGATAAATCAGTATCTCTAATTATAATGTCCAATGAAGGATTTTTCTTTAAAATTTCATTCTTTAATTGTATTAAATTATTCTTTGTACGTGCTACTATTATTAAATTTTTACCTTTAGATGCAAAGAG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTTGTGGAATATAAAG # Alternate repeat : GTTTTATCTTAACTAGTGGAATATAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 8433-9038 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQCS01000155.1 Clostridium sp. 3-3 scaffold155, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 8433 28 100.0 37 ............................ CAATCAAAAGAACTAGCTATTGATTTTAATTTAGCTA 8498 28 100.0 37 ............................ ATAGGTGCTTCACCACTACCATCATCTGTTTTTGCTA 8563 28 100.0 36 ............................ TTTTTTTAGCAACATTACCACAAAACTCAGAAAAAA 8627 28 100.0 37 ............................ ATTCATACTCACCTACTCCCCAAAGACCAATACTTCG 8692 28 100.0 36 ............................ TTACAAGCAATAAACAAATGAGTATGATATGTCTTA 8756 28 100.0 35 ............................ TTTGGAGCACTTAACTTCTTTTTTTCAATATCTTC 8819 28 100.0 35 ............................ ATTACAAAAACATCAGCAAACACTATGAAAATTCA 8882 28 100.0 37 ............................ TAGGAATCATTAGCGCTTTTTCTTCTTCTGATGTAAC 8947 28 100.0 36 ............................ CAAATTGCATTATTAATTCTATCACGCTTGTACTTT 9011 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ===================================== ================== 10 28 100.0 36 GTTTTATCTTAACTAGTGGAATATAAAG # Left flank : AATAAAGCATTTAATAAAAGATGAAAAATATGTGCCATTGAAAGCGTGGTGGTAAAATGTTTGTTATAATTACTTATGATGTTAATGAAAAAAGAGTAAATAGAGTTAGAAAAGTTTTAAAAAAATATATCACATGGTGCCAAAATTCAGTATTTGAAGGGGAAATATCTGTAGGAAAACTTACAAAATGTATTGCGGAAGTAAAGAAACATTTAAATGATTCTGAAGACTCATTGTACGTTTATAGAGTTCCATATAGTAAAAATATAAAAAAAGATGTATTTGGAATAGAGAAGAATTTTGATGAAATGTTCATATAGTTGCAGTGAACGAATTTTTTTGAAAAAGATTGAAGGATCTGATTGTTACAGAGGTTAAATACATTTTTTTAAAAAATGAAAATACATTACTGTAAGTTCACTGCAAATTTATGTGCTATAATATATAGTGTAAGTACGCAAAGTAAGTAAAAATGCGGGTTTGAAAATTTGATTTTTTGG # Right flank : ATTCATACTCACCTACTCCCCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTTAACTAGTGGAATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //