Array 1 128812-125793 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTC010000005.1 Streptomyces olivaceus strain MM1-7 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 128811 28 100.0 33 ............................ CCCTTGAGCATCGGCATTGAGGACGAGGACCTG 128750 28 100.0 33 ............................ CTCACCCGTCCCGTTGCGGTAGGCCGTGGCAAC 128689 28 100.0 33 ............................ GATCATCAGCGGGCCGATGGGTGCCGGCACCAC 128628 28 100.0 33 ............................ CCGTGACAGGGGGAGGGGGTGTCGGCGCCGCGG 128567 28 100.0 33 ............................ CTGACGGCGGTCGCCCCGAACACGGTCCGGGCG 128506 28 100.0 33 ............................ CGTCGCCGCGACCCGTTGCGCCCCGCCGGGGCC 128445 28 100.0 33 ............................ CCCGTCCGCCCAGATCACCGCCGTCGAATACGA 128384 28 100.0 33 ............................ GTCCACCACTGCCTCCCCCAGGTCGTTTCCCCC 128323 28 100.0 33 ............................ GCCGCAGCCGCGTTCGAACCACGCGGCGACCGA 128262 28 100.0 33 ............................ CCCAACCCGGTCCAGTGCCTGTTCTGCGGCGGT 128201 28 100.0 33 ............................ CATCAACCCCGGCGACGTCACCGCCGGCGGCGG 128140 28 100.0 33 ............................ CTCGCCGAACAAGCTGGACAAGGGCAGCACGAA 128079 28 100.0 33 ............................ TCAGGCCCTCGACGCCATGACAGGCGTCCAGTC 128018 28 100.0 33 ............................ GCGGAAGGCCACTCCGGCGTCCGAGTCCACAAA 127957 28 100.0 33 ............................ CCACACCAGCCACTGGTGGGTCGGGGGATCCCT 127896 28 100.0 33 ............................ GGTGATTGAGTACCTCCGCCAGGACGAGGACGA 127835 28 100.0 33 ............................ CTGTCGGCGTACGCCTTCCCTCCGATGCCGGCG 127774 28 100.0 33 ............................ GTGGGACATCCTCGACCCGATGGCCGAAGCCAT 127713 28 100.0 33 ............................ GTCGGTGGTCCGCTTCAGCCCGTCGGCCTTCGG 127652 28 100.0 33 ............................ CCCCCACCCCGGCCGGACGGGCGCACCGGTACT 127591 28 100.0 33 ............................ TCGTGAATTACCCCCAGGTTCACCTCCTCGCCG 127530 28 100.0 33 ............................ CTGACAGACCGCCGTCTCGCACTCGGCCCCGTC 127469 28 100.0 33 ............................ CCATGAACGTCGGCGACCATAGCCGCAGATTTG 127408 28 100.0 33 ............................ CGGCCTGCCGACGGTCGAGGAGCGCGTGGGTCT 127347 28 100.0 33 ............................ GCCCGGCCTCGCTGAGGGCGTCGGCCGGGCTTC 127286 28 100.0 33 ............................ TGCGGTCACCGACCGTCCGGCGGGCGTCGAGGA 127225 28 100.0 33 ............................ CGCGCCCCGCTCCGGGGAGTCGTGGGAGGACGT 127164 28 100.0 33 ............................ CAGAATCCCTTGCTCCTGCCGACGCTTACCTCG 127103 28 100.0 33 ............................ CTGCACGGTGCAGGCCGGAACCAACGTCACCGT 127042 28 100.0 33 ............................ TCCGTACGTGGTGAGCGCGGAAGTCCCGTGCGC 126981 28 100.0 33 ............................ GGCACGGCCGCAGTCCAGGCGGCCCTGCGTAAC 126920 28 100.0 33 ............................ GTTCCAGGACCATTTCATCAACGGTGACACGGC 126859 28 100.0 33 ............................ TCAGCGCCACCGGTCGTGGCGCCGCCAGCTGGC 126798 28 100.0 33 ............................ CGCCCTACCCCACGCCCGCATCACCACCCAAGG 126737 28 100.0 33 ............................ GCGCCGCACCGCGCTGCCCGTCCTCGCGGACGT 126676 28 100.0 33 ............................ CGCGGCCACGAACTCCGCACCGCCCGCAACTTC 126615 28 96.4 33 .........A.................. ATGACCCCCGCCTCGACCATTAGGTTGCGCAGG 126554 28 100.0 33 ............................ CGCGTACAGGTCCTTGATCCACTCGGCTTCCGA 126493 28 100.0 33 ............................ GACGCCGGACTGTCGGTCGGCACGATCAGGAAG 126432 28 100.0 33 ............................ CTGGCCGCCCGCGCCCGGCTGCCCTGAGGCGAC G [126415] 126370 28 100.0 33 ............................ GTTGCTCGGGGCGGCCGCCGACCGCGGTACCGG 126309 28 100.0 33 ............................ CGGGCCGGACGAGAGGACCAGGGCGGCCTGGTC 126248 28 100.0 33 ............................ TCCGCATCCAGGCGTTCCTTGCCGAGGTACGTC 126187 28 100.0 33 ............................ GGGCAGCACCCTGACGCTGCCGCTGACCGAAGC 126126 28 100.0 33 ............................ CTTGCTCTCCCCCCGCGCGATCAGCAGCCCGTC 126065 28 100.0 33 ............................ TGCCGGCGTCGGCCACACCGCGGGCACCCTCGG 126004 28 96.4 33 .................A.......... TGGAGTTGTGGGACTACCGGATACGACTCGTAT 125943 28 96.4 33 .....................A...... GACCGTCACGGTGCTGAGCATCGCGTACGCCGG 125882 28 96.4 33 ...T........................ CGAGGACCCCCTATACCTGCGGGCCATCGCCCC 125821 28 75.0 0 ...........G.........ACGACC. | C [125799] ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.2 33 GTCGTCCCCGCACCCGCGGGGGTAGTTC # Left flank : CCCCCATGCGCCCCAACGGCAGCCCCGCCGCCAGCACCGGTGCGGCCTCGGCCGCGTCCATGGCCTGGAACGCCGGGCATGCCTTGCCGCAGTCGTGGATGCCACACACCCACATGAACCAGAGCCGCCCCCGGCCGCCGCTGACCTCGTCCAACCGCCGCCGGAACGCGGGCGCCACGTACCGGTCCCACATCACGCCGGCCACGGCAGCGGTGTCCAGCAGGTGCCCCAGCAGAAGATGCGTTCGACCGTCATTGCGTGCGGCAGACTTCCCCCACAACCGCGACACCCGCTGGACGACCTCGTCGTCCAACTCCATCGCCCGCATCAACGCAACGACCGACCGCTCGTCCTCCACGCCCCGCTCCCTCCCCTGAACCGAGCCGCATGCGGCTAGTTGTGAAGGAACCGTAAACGGTGCCACTGACAATGCCCTCCCGGGCCAAAACGAAGTGAAGGAAAACAGGTACCCTCCCTCACATCACCGCAGCTCACGAAGT # Right flank : CTTTCCCCCGTGCTGCGTCTCACATACCTGTTGCTCGACACGGAAGTTACCGCGGCAGGGCCCCGCCCCTGGCGCGGACGCCGGTCCACTCGCACCACACCACCTTGCCCGGTGACCGTTCCGCCACTCCCCACTTGTCGGCCAGTTCCGACACCAGCAGCAGTCCGCGCCCGCTCTCGTCCGACCGGTCGGGGGCCTGGGGTACGGCTGGCACCCCGTCCCCGCTGTCGTGGACCTCGACGCGCACACCGTCCCCGCAGGGCAGCAGCCGCAGCAGGAAGCCCCTGCCAGGTGGTGCGCCGTGCACCAGCGCGTTGGTCGCCAGTTCGCTCACGCACAGCGCCACGTCGTCCGCGCGCTCACACACACCCCAGTCGGCGAGCACCTCGTGCGCGAACGCCCGCGCAGCTGGGACGGACCGGCGCTCTCGGCGGTAGAAACGCTCACGTGAGGAGAGGGGTGGAGTTTCGTTGTTCACGTGACGAGAGTCACGCTCCGTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 139304-140856 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTC010000005.1 Streptomyces olivaceus strain MM1-7 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 139304 29 100.0 32 ............................. GTGGCCCGGACGGTCATCACGTTGACCGTGGG 139365 29 100.0 32 ............................. GCGCCCCCAGTCGACGGACTGGGGGCGCGTGC 139426 29 96.6 32 ............................G ACGCTCGGAACCTTGATCGTTCTCAAGTTCTC 139487 29 96.6 32 ............................T ACCAGCCACACCTCCCGGAACAGTGACGGGAA 139548 29 96.6 32 ............................G CGTGTGGGGAGTCCGCCGCGGAGGCCGAAGGC 139609 29 100.0 32 ............................. TCCTCACGCGCCTCAGCGACCACCGGACTGCC 139670 29 100.0 32 ............................. TGGCGGGCGTCCTCGGGCCGGGGGACGTCAAC 139731 29 96.6 32 ............................G CGGGACACCGAGGATGCCGTGCGGTCCCGCAT 139792 29 100.0 32 ............................. CGCCCTCGCCTGGGACCGCTGGCCCGACGGCT 139853 29 96.6 32 ............................G GCTGTGGCCACGGGTTGACGCTGCGGCAGTCG 139914 29 100.0 32 ............................. TCGGCGGTGCCGTCCGCGCGGATGATCCACCC 139975 29 96.6 32 ............................G GTGGCCGAGCGCCTCGGCGTGTCCCGCCGGAC 140036 29 100.0 32 ............................. CGGGCCTTTTTGCGTTGGGGCCCTGGTCAGGC 140097 29 100.0 32 ............................. CTCGGCAGCGATGACCGCGCGCTGCGTCTCGC 140158 29 96.6 32 ............................G ACCCTCACGGCCCTGCGCGCCGGGAGCTCCCC 140219 29 96.6 32 ............................G CTGAAGCCCTGCAAGGACTGGCTCGCCTCGCA 140280 29 96.6 32 ............................G ATCGCAGCGCTCGCGCTCCGCCCGGAGGGCTG 140341 29 100.0 32 ............................. AGGCACAGCGGGCCAGGAGCGCCCTCCGCGGG 140402 29 100.0 32 ............................. CCGGGTCTGCATCGACGACGACTTCGGACCGT 140463 29 96.6 32 ..T.......................... CGAGAGGACTCACATGCCCAAGAAGACCAACC 140524 29 96.6 32 ............................G CAGGTCAACGACGTTCACGGCCACGCCGCCGG 140585 29 96.6 32 ............................G CCGCGGGCGTCGCTGGCGAGGCTGAGCGTCCA 140646 29 93.1 31 ..........T.................T GGGACGTGGCCCGGTACTGGCCGGGCCGGTC 140706 29 93.1 32 .......................T.C... CGCCAGGACGTGTCGCCGCTGTAGGCGGTGCA 140767 29 82.8 32 .............T.A..T......C..G GAGCTGCGCGGCCGGTGCCCCGTACGCCGCGC 140828 29 75.9 0 ....C..A.............ACG.CC.. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 96.3 32 GTCGTCCCCGCGCCTGCGGGGGTAGTTCC # Left flank : GGCAGCGACCTGCTGGACGAGGACCTCGGCGCCCTCTGGGACGACGGCGACACCGTCGTCAGCGGCGGCCGCAACTGGAGCGCCACGCACCACCTCGACATCATCCCCGAACCCACCTCCGCAGAGGCGGCCCCGTGAGCGCCGGAACGACCGTAGTCGTACTCATCGCGGCCCCACCCGGCCTCCGCGGACACCTCACCCGCTGGTTCGTCGAGGTGGCCGCCGGCGTCTACGTCGGTAACCCCAACCCCCGCATCCGCGACCGCCTGTGGAGCGTCCTCGCCGAACGCATCCACGACGGCCAGGCCGTCATGATCGAACCGGCAGCCACCGAACAGGGCTGGTCGGCCCGCACCGCCGGCCGCGACCGCTGGACCCCCGTCGACTTCGACGGCCTGACCCTCATGGCCCGCCCACGCCAGAACGGACAACCCTGGCGGCCCACGAACGAGGTAAAGCAAAACGGCATGATCACCTGACAAAACACCAGCTCACGAAGA # Right flank : CTTGCAGAGCTTTGTGTGGACGGTGGAAGCGAGGCGGTCGTCTTCTCCAGGCGGATCGGAAACCGCGGAGCGCCGCCGTGGCCGTCATGATGACGATATACGGCTCGGTTCGGTGAGAAGCCAACGTCAAGGCGGCGAGGCGGGCACAACACGAGCGCCAGCGGTGTCTACGCGACTGGCCGTTTGCTCGCCGCTCGCCGCCGTCCGCGGCATCTCATCAATCGCACTCGACTAGCGTCCACCGTCATGTCGTCCCCAAGCGCTCAGCTGCGTCTGACGGGCCCACGGGCCACGTCGGCGGGCTTGTCGAAGCCTCAGCCTTGGGCGTTGCCCCTGCGAGGCGGCAGTTTCCGGTCGTGAGGGGCTCTCTTCTCATCGAACCTCTGTGCCTTGTAGGTTCGCGTGTGCGCAATGAGTTGTTGCTGATGCGCACGGGCTGACGGGGGATGAGCGATGGTGGGGCACCGGCCGACGGATTGGCATGTCCTGGACCTGGACAA # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 146898-147354 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTC010000005.1 Streptomyces olivaceus strain MM1-7 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 146898 29 100.0 32 ............................. ATCACCACGCGGTTCACGGTGGTCGGTTCCGT 146959 29 100.0 32 ............................. ACCCCAGCCACATCGGCCGGGGGCTCCTTGGT 147020 29 100.0 32 ............................. TGGATCGGGACCTGGAGGACCCAGGAGAACGT 147081 29 96.6 32 .........................C... GACCAGCTCAACGCCCGATGCTGGGTCGACGG 147142 29 93.1 32 ...........A.....A........... GTGTACGTGCACGGGTTGCGGAACTGGTACTC 147203 29 96.6 32 .............G............... TTCGTGGAGTCGTGGATCACGCCGAGGGTGAC 147264 29 75.9 33 ........T..A..A..........GTTT GGCGGGTGCGCAGGTAGAGGCGGTCAAGCGGCG 147326 29 69.0 0 ..A..G.G....T.A.T..CA..C..... | ========== ====== ====== ====== ============================= ================================= ================== 8 29 91.4 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CTCCGGTCGGGAGAACGAGGAGGAAGCCTGGGGCAGGTTCCGCAAAATGCTCCAGCCGAACAAGCTCGACCGCACCGAGGTGCCGTTCGTCAAGATGCGCTACGACAACACCCGCACACAGAGCATGAGCAAGGGCGACGCCCGCGGCTTCGCGCCTCTGGACACTCTCGTGCGGGAACTGGGGCTGCTCGACGGTGCTCCCGGCAGCTTCGTCGAGTGGGAGAACCGGCACGGCGCCGTCTGGCGGGCGGACAGCAACAGCGACGGCCTCGAGCTGGCACACGACGGCACGCGGGAAACGGTGGACACCGGCCAACTGCAGGCTACGGCCCGCACCAGCGTCCAATGAGCCCGGTCCCGTGCCCATTGCCCACAGAGCCTGCGTAGACGCGCAAGGTGAGTCCGACTTGCATCACATGCTACTCATGCCCCATTTGCCGGATCTTGTAAAAGTCACTGAAAACGTGCCCCTGAGCCCATAAACTCCCAGGTCGGACAGT # Right flank : CTGCGCGGTGGCTGGCTTGGATGGTGTTTCCACCGCACCGGTCGAGACGTTGTGGACCGGATCAATAGGTGAGCGTCATCCGGGTTTCCGGCTTGCTGATGGTGTGGCCTGGGGCGTCCCCGGTGTCGGAGGGCGTGATGGTCAGTCGTGGTACTGCCAGGCGGGCGGCGCCCCACGCGTCGATGTGGGCGACGAGGTCTCGGGCCAGTTCCTCGCCGCGTTGTCCGTATGCGGTCGCGCCGAGTCGGAACGGGCGTTGCGGGTCGGCGTCTTCGCGGGTCACGGTCAGGTAGGCGAGGGAGGCGTCGTCGATCAGGGCGGGGGTGCGGGCAGGTGTGGCGGGCCTGCGGATCAGGGCCTGCTCCATGGCCTCGGGGGTGGCTTCGAGGCGGCATACGCGGTCGTCGTGGGCGCTGGCGCGCAGCCATACTCCGTCGAAGGACTCCTCGCCGCCGATCCGCTGGGCGGACAGGACCTCGCGGGCGGGGTTGTCCGCTCGC # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 158152-158730 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHSTC010000005.1 Streptomyces olivaceus strain MM1-7 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 158152 29 96.6 32 ............................G ATCGGCGGATAGATCCGGTCGGTGGGGATGAA 158213 29 100.0 32 ............................. GTCCGCTTCGGCGCGCGTGGCGTGGCGCGTAG 158274 29 100.0 32 ............................. CGGTTCGAGCGACAGACCGGCATCACGCTGGG 158335 29 100.0 32 ............................. GAGCCATCGACGACGGGTACGAGATGGCCGCC 158396 29 100.0 33 ............................. ACCTCCCGCCGCTCCAGGTAGCCGTGCTCGCCC 158458 28 96.6 32 .....................-....... ACGAACCCGGCGACGTCGATCCCCGCCATCGG 158518 29 100.0 32 ............................. ACCCCACAGTCCCCGTACTGCTCGGTGGTCGT 158579 29 100.0 32 ............................. GACAGCAGCCGGCCGGTGCGGCCGTCGTACAG 158640 29 100.0 32 ............................. GGGTCCGTGACCATCGCGGAGAACGGCGTCAG 158701 29 89.7 0 .............T..........AC... | C [158723] ========== ====== ====== ====== ============================= ================================= ================== 10 29 98.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : ACACATGTTCACCCGACGACCGCGACCGGGCCGAGTGGCAGCCCGGCAACCCCGCCTGGGGCCACTGCGACATCACGGCGTTGATCGTCAACGACATCTTCGGCGGCGATCGCGTGGTCGGCGAGGTGTACCTCAACGGTGCTCAGCGCAACTTCCACTGGTGGAACCGGCTGCCCAATGGCATCGAGCTCGACCTGACGCGCGAACAGTTCCGCCTCGGACAAACCGTCACGGCCGCCCGTGTCGTCGAACGCCCGCCCGGCCCGCTGCCCCGTCGCTATGAGGAGTACCTCCTGCTCCGCGAGCGCATGGCCGAACACCTCAGCCCGCTTCCGGAGCCTGCGTGAGGGAGAGCCATGCGGCAGTCGGAATCCGCCGGAGCTGTGGTCGACCAACTCTGCGTACGTTCGGACCGATACCGCGGGGTGCCCTATTTGCCGGAATCTTCGAAAGTCACTGAAAACACGCCTCTGCGGCCATAAACTCGCAGGTCAAACAGT # Right flank : CTGCGGAGATCGGCTTCAGGGTCGCTGGGTCAGTTCACTGGAGCTTCTCGCGCGTCTGCGCGCCGCTGGTGGGCGGCGCGCAGACGGGTGGGGTGTGCTCGGTGCGGGGGCGGTCAGGCCCAGCAGCCGTTGACGGTGGCGGCGAGGCCGTCCATGGCGTCCTTGATGTCCGTCGGGTCGGCCGTCGAGTTGTTCTCGATGAAGGAGAAGATCCGCCAGTCGCCGTCCTCGGTCTTCGTGACACCGCTGAGGGCGATGGCGCCGGTGAGGGTGCCGGTCTTGGCCTGGACCTTGCCGACGGCGCACTCGGAGTTGGGGTCGTCGAAGCGGCCCCACTCCGGGCCGAGGCTCGCCCCGGCCTCGCCGGCGACCGGCAGGCCCTCCAGGATCGAGCTGAGGGCGGGGGACTCGGTGATCGAGTCGAGGAGCTGCGCGAGGGTGGCGGCCGGGATGCGGTCGTCGCGGGAGAGGCCGCTGCCGTCGTGCATCTCGAAGTTGTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //