Array 1 85-662 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WICI01000123.1 Salmonella enterica subsp. enterica serovar Enteritidis strain S10 NODE_123_length_7870_cov_30.427820, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
        85	    29	  96.6	    32	...........................T.	CCGTGCCTGTCCAGGACAAATTGCCGATTATT 	
       146	    29	  96.6	    32	...........................T.	CTGCCGGTCTGTGCTGTTGTCGTCAATAATCA 	
       207	    29	 100.0	    32	.............................	GCATGTGACAGTCTGATTTTTATAGCGCATGA 	
       268	    29	  96.6	    32	............................C	AATTTAGGGGCCGGAACTCCGGGAAAGGCAGC 	
       329	    29	 100.0	    33	.............................	CAAACACCAAGCTCTTCCGCCGCGCGTTCCTGA	
       391	    29	 100.0	    32	.............................	TTGCTCTCATTAAAGGGGTTTCCATGTTTGAT 	
       452	    29	 100.0	    32	.............................	CGGTCGCAGCCTGGCCTGTTGCCGTAGAATCG 	
       513	    29	  96.6	    32	.........T...................	AGTTACTGATGCAGACTGCGGATCTTAATCGG 	
       574	    29	 100.0	    32	.............................	TGCGCCAACGACTGGAATTTTTGCGTGTAGCC 	
       635	    28	  82.8	     0	...............A.AA....-.G...	|                                	
==========	======	======	======	=============================	=================================	==================
        10	    29	  96.9	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   ACACAGATTATGATTATGCAACGGCTATCCTTGTTGGCGCGGGGATAAACTGAGGATTTCGCCGCGCTGTTGGCCTCCAGATTCG
# Right flank :  GTTGCATAATCATAATCTGTGTACCAGTAATGGCTGGTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCCGGGGGAGGCTTTTCTACAGGAGAAGGCCATGGCGTTAAGGATCAGGGTATTGCTCGAAAATCATAAGGGAGCTGGAGCGGATAAATCGTTGAAGGCCCGGCCAGGATTAAGCCTGTTAGTCGAGGATGAGTCTACGTCGATCTTGTTCGATACCGGCCCTGATGGCAGTTTTATGCAAAACGCGTTGGCGATGGGGATCGACCTGTCCGATGTGTCTGCTGTGGTGCTTTCGCATGGTCATTACGATCATTGCGGCGGCGTGCCGTGGCTTCCTGATAACAGTCGAATCATCTGCCATCCCGATATTGCGCGCGAACGTTATGCGGCAATGACTTTTCTCGGTATTACCCGAAAAATAAAAAAATTGTCGTGTGAGGTGGACTATTCACGCTACCGAATGATGTACACGCGTGACCCCCTGCCGATTG

# Questionable array : NO	 Score: 6.03
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   GTGTTCCCCGCGCCAGCGGGGATAAACTG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0.27   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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