Array 1 172300-171539 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AQFI01000022.1 Escherichia coli BCE008_MS-13 gecBCE008MS13.contig.21, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    172299	    29	 100.0	    32	.............................	CCGGCGAAGTCTTTCCCTCTGTCATCGTGTTG	
    172238	    29	 100.0	    32	.............................	CTTTTCCGAGCTCACGAGTTACCGGCTATCGC	
    172177	    29	 100.0	    32	.............................	TTGACCCATGCGCTAAGGTCAAAATGACCCAA	
    172116	    29	 100.0	    32	.............................	CACTGTTATTCAGAGGGGTAAATAAAAAATAT	
    172055	    29	 100.0	    32	.............................	GCGCGAGTGAGTTAATTCCTCAGACTATCGAC	
    171994	    29	 100.0	    32	.............................	ATTTGCTCGCGATGCGCCTGCAGCTGGAACCC	
    171933	    29	 100.0	    32	.............................	GGGCTAAAAGACGCGTCGCCGCCAGGCGGCTT	
    171872	    29	 100.0	    32	.............................	GGGCTAAAAGACGCGTCGCCGCCAGGCGGCTT	
    171811	    29	 100.0	    32	.............................	GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC	
    171750	    29	 100.0	    32	.............................	GGATGACCTGTCGCTAAAACTCGCCGCGTACA	
    171689	    29	 100.0	    32	.............................	GGATGACCTGTCGCTAAAACTCGCCGCGTACA	
    171628	    29	 100.0	    32	.............................	TCCGTTTGGTCCACCAAATGTTTGATGCTTCA	
    171567	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        13	    29	 100.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACACCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTCCCTTACTGCTTCAGGGGGTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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