Array 1 1381622-1389600 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033465.1 Clostridium sp. JN-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1381622 30 100.0 36 .............................. TTATCGTACATCTATTATTTTATTTTTTGCAGAATT 1381688 30 100.0 34 .............................. TTATTAACAATAATATTTATTGTACCTTCATTTT 1381752 30 100.0 36 .............................. ATGTTTCTGCTTATGATAGCAACCGCCTTGTGGCAA 1381818 30 100.0 35 .............................. CCTGGACAATGTGCACCAACTGCATTTTCTGGTCT 1381883 30 100.0 35 .............................. ATTAACAATACCTTGTACATATCAAGGAGGTAAAC 1381948 30 100.0 37 .............................. GTTTGGCAGCATTGCTATAAAATGAGTGTTTATACAC 1382015 30 100.0 36 .............................. ATGATGATTGAAATAAGCTCATATGAATTTATTTTT 1382081 30 100.0 36 .............................. TAATTTTACAATAAAATATGAATTTTATAGAAATAA 1382147 30 100.0 35 .............................. TAATATTACAACCTTAACTGGAATTATAATTAGTT 1382212 30 100.0 35 .............................. ATAATTTTTATCTCTCCATTATACCCACATTTCTG 1382277 30 100.0 36 .............................. TTTGACATAGTTATATTTAAATCACTTGTAAATTTA 1382343 30 100.0 36 .............................. TTAGTTTGTTGTGTCTCTGCTGCTTGCTCAGTTTCT 1382409 30 100.0 36 .............................. ATGTAATATTAAAGGGGATACTTATACAGGAGGTTT 1382475 30 100.0 36 .............................. ATATCTAGGAAAATAAAACCTATAGGAGGGTTATTT 1382541 30 100.0 36 .............................. AAATATTCTTTACTACATTATGGAGTGGCATTACAA 1382607 30 100.0 36 .............................. TATTTAATTTAGGAGGTTTATATTTCTTTAATTCTA 1382673 30 100.0 36 .............................. ATGTTACAAGATGTAGTATTTAATACTACATAATAT 1382739 30 100.0 36 .............................. CTATCCTAATAAGGATAAATAGGTACGCCGACACTC 1382805 30 100.0 36 .............................. CATATGTTATTGTCCTCAACTAAACCACTCCTTTAC 1382871 30 100.0 35 .............................. TAGGGATTGTTTTATGAGCAGGCTACTTAAAAATA 1382936 30 100.0 36 .............................. GCAACATCTATAGGAAGTATTAAATCGGCGTCGTTC 1383002 30 100.0 35 .............................. GATAAAGTTTCTAATGCATTATTAATCTTTTCTAA 1383067 30 100.0 37 .............................. GAATATGTTTTTATGTTAATCATCTCCATTTATTAAT 1383134 30 100.0 35 .............................. TGGTGGTTCTAAAACATTATAATTTCTAGGTACTT 1383199 30 100.0 35 .............................. TTGTTGTAAAGGAAAAAGGAAATCAGCAGGCAAAA 1383264 30 100.0 36 .............................. ACAAAATGCTATAGCTATTAAGACAATGCAAGGTAA 1383330 30 100.0 36 .............................. AAATAATATATTTCTTTCTTTGGCACTCTATATTCT 1383396 30 100.0 35 .............................. CTATCAGTATTAGTTTGTACTAAATTAATACTATT 1383461 30 100.0 35 .............................. AGTATATACTGTATATATTCAATATGCACAGTTAA 1383526 30 100.0 35 .............................. TTAAAAACATATGGGAAATCATCTACTCCTTGTCT 1383591 30 100.0 36 .............................. TATATTTCTTTAGCTATATTAACCATATCTAGCCCC 1383657 30 100.0 36 .............................. TAAAAAGTTAATTGTTTACCTACTCTTTTAGCATGT 1383723 30 100.0 34 .............................. TGCGAAAGGCTCACATCTTTTAAGCGTGGGATGG 1383787 30 100.0 36 .............................. ACGAATCGTTGACATTAACTTTATCCTTATCATCAT 1383853 30 100.0 35 .............................. TGGTAAATTTGATAAATACTTATATGGTGCTATAT 1383918 30 100.0 35 .............................. AGAAAAAGGCGGACAATTTGAGGGAGTTAGACTAT 1383983 30 100.0 36 .............................. ATGTAAGTGTGGGAACATATTTGAAACTACTTTTAG 1384049 30 100.0 36 .............................. CCTTCTTTTATTTACTTACTTATTACTTTATATTTT 1384115 30 100.0 35 .............................. GTTATTGATTTGATTTTTGCTTCTGCTTCGGTTTT 1384180 30 100.0 36 .............................. CAATGAAAACAAAGAATCATGTAAAGATTGAAGAAA 1384246 30 100.0 34 .............................. TAATATATAAATTTTACTTTATATCCAACACTTG 1384310 30 100.0 35 .............................. ATGTAAATACTGATAAAATAAATAATAAAGTATCT 1384375 30 100.0 34 .............................. CAACAACCAGTATAAATACTGGAGCTGCTAAAAA 1384439 30 100.0 37 .............................. GTATTTTTAGATGTATCTACATTTAGGCTATTGACAG 1384506 30 100.0 36 .............................. GGGTAAAAAATATCCCAATAAAACCATATCAAATAT 1384572 30 100.0 36 .............................. TAAATATGGTAACGATTATTGTCATGGCAATCTTTT 1384638 30 100.0 36 .............................. TTTACTCTTTGCATTACTGAGCTTATTGTTCTTCCT 1384704 30 100.0 35 .............................. ATACAAGGCTATAAAAGCATATCACTTTAGAAATA 1384769 30 100.0 36 .............................. TATCTTTACCTCTAACTTTTATATTTAGAGTTGTAT 1384835 30 100.0 35 .............................. AGAATATAATTTTTCTTATACAGGGAATACATTTA 1384900 30 100.0 38 .............................. GAGGAACAAATAATATTTAAAAATTTAACTATGGATAG 1384968 30 100.0 36 .............................. TTAATACCTACATTTTCTTTTAACATATAATACATC 1385034 30 100.0 35 .............................. TACAAAATTCACCTCCTTTCATTACAATTTTTATG 1385099 30 100.0 37 .............................. TCTAATCCCTGAATTCTTTTTCTACCAATACATTGTA 1385166 30 100.0 34 .............................. TAGTGTTATAGGATATAATACTACTAATAATAAT 1385230 30 100.0 35 .............................. TATGTTATTACCTCTTATTTATTTTATATATTTAT 1385295 30 100.0 36 .............................. GGATCACTGGCTTCATATAAAGCTTTTGCTTTATAC 1385361 30 100.0 36 .............................. TTGCCAAAAAGATCTTGAAAATATAATGGATATGAC 1385427 30 100.0 35 .............................. ATTATTTTATTAATATCTTTGTTACGAACTTCAAG 1385492 30 100.0 35 .............................. GTAATATAGCTATTATCTTCTTCAACATGTATATT 1385557 30 100.0 36 .............................. AGTTTCTATCAACCATACCTTCTATAATACTAGTGA 1385623 30 100.0 36 .............................. TTTAACATAAAACCCATCTCCCGTAAATTTTTATTA 1385689 30 100.0 36 .............................. ATTTCTTTTTTATTTTGAAGTGATTGAATTTTATTT 1385755 30 100.0 36 .............................. TTTTGTTTATTGTATTTATCTAAGTCATCTATATTA 1385821 30 100.0 36 .............................. ACAAACATAGAACACTGATAGCAAAATTCAAGGTCG 1385887 30 100.0 36 .............................. ATACATGCTTTTCTTACACCCATCCATACAATTCCT 1385953 30 100.0 35 .............................. TTTATTTTTATAACTTTTTAATCATCTTCTGGACG 1386018 30 100.0 35 .............................. AGTATATACTGTATATATTCAATATGCACAGTTAA 1386083 30 100.0 36 .............................. TATATAGCCTTTTGAGGCATTATTTATTTTTTATGT 1386149 30 100.0 37 .............................. GCATAAAAGAATAAAGCATCCCCTACTTGTTGTTCAG 1386216 30 100.0 36 .............................. TATATAGCCTCTATTATAGGCGTTATTTATTTTTTA 1386282 30 100.0 36 .............................. TAAGCAAAGTCTGGCATATTTGCCTTAGAATATCTA 1386348 30 100.0 36 .............................. TTAAATTAAATCTTTTTAAAGTTTCACCTAATATTG 1386414 30 100.0 35 .............................. GATTTAAGAAAGCAGTCATTTTTGCATCGTTTTCT 1386479 30 100.0 35 .............................. ATAATTTCAACTTCATCTTGAATATCATAATATAT 1386544 30 100.0 36 .............................. GATGAAGAAATCAAAAAAGAAATAAGAGATATGGAA 1386610 30 100.0 36 .............................. CAAAGTTCGCCATAACAGCAACCAATGTATAGTTTA 1386676 30 100.0 36 .............................. AATATAAAATTATATCCTTTGCTACAATTATTAAAT 1386742 30 100.0 36 .............................. AAAGTTGATAGTGCAATGAAAGCTAATAGAGAAAAA 1386808 30 100.0 35 .............................. TATCAAACAATACATTTCAATAGTGCCGCAATGGC 1386873 30 100.0 35 .............................. GCATATGCAGGTGATAAGGCAGTAATTAGAAATGG 1386938 30 100.0 36 .............................. TTTTTTGAAAAAGTAATCTGTTTCCATTTTCTCTTT 1387004 30 100.0 36 .............................. TCAGAGAACATTCAGGATTCAACATATACTGATTCT 1387070 30 100.0 36 .............................. AGATTTCTCTTTCAGGTAAACCGATTAATGATAAGG 1387136 30 100.0 36 .............................. ATATAGGAGCTATCACATTCTCTAATATTGTACTTT 1387202 30 100.0 36 .............................. GGATATTTTTCTCTTGCTTTGTTAAGAAATTCATTT 1387268 30 100.0 36 .............................. TATAATGGATATCTTAAAATTCTATTTTGTGAAAAG 1387334 30 100.0 35 .............................. TATTTATATGTTTTTCATCCATAGGTATATTTATA 1387399 30 100.0 36 .............................. ATAGATAATATTTTATTTTTTAAATCAATCACTTTT 1387465 30 100.0 36 .............................. GCTTTATATTGTATCATCTGAATAAAATGTTGATGA 1387531 30 100.0 36 .............................. TGTTATTACCGTAAATTCGTTTAAAATAGCCATTCT 1387597 30 100.0 37 .............................. AACTTTAGATAATGATGCTGAGAAAGTAAAACTTAAA 1387664 30 100.0 36 .............................. TCCTTGATTCTGAATATATCTCTCTATTGTTTCTTT 1387730 30 100.0 34 .............................. AAAATAAAGAGTTAATTACCTTAATTGATAATTT 1387794 30 100.0 34 .............................. ATATTTTCTATTAAGATTAAAAGCTTTTTCAATT 1387858 30 100.0 36 .............................. ACACAGTAATAGTTTACGAGAATCAATTTAAATCTT 1387924 30 100.0 36 .............................. TTGCCTTTTTTATGGTTCCAGGCTTCAAAGGTAATC 1387990 30 100.0 35 .............................. ATTGTAAACCTCCTTTCTTTACAAAATAAAAAAGT 1388055 30 100.0 35 .............................. GAATCATTAAAAAATTCTCCTTCTTTAACAAGAGG 1388120 30 100.0 36 .............................. TCATAGATATTTTCATCTAATCCTTTTAGTTGTTCA 1388186 30 100.0 36 .............................. AGCTTTTGCTTTTTTGTGCCTAAATGTTGACATACC 1388252 30 100.0 36 .............................. GCATATCAATAATACTTTCTTCTAGTTCTCCATCTG 1388318 30 100.0 36 .............................. AATTCGAAAAGTGTTGATATATTCATAGATACTAGG 1388384 30 96.7 35 ............................G. TATTCAATCAGTCGAGATAATGGAGTAACATTTAC 1388449 30 100.0 37 .............................. TTTTTAAGAGAAATTATAGAAATACATTTAGATAGAA 1388516 30 100.0 36 .............................. TTGCTCTATAGCTTTTTCCACACTTTTTAAAACTTG 1388582 30 100.0 36 .............................. TATGTTGCTATAGTTGGTAGTCCCATGGAAGATAAC 1388648 30 100.0 36 .............................. TATGTTGCTATAGTTGGTAGTCCCATGGAAGATAAC 1388714 30 100.0 37 .............................. TAGCCTTAACAGATTTTATTTCCTCTGTTTTAGCTTT 1388781 30 100.0 36 .............................. TCAGGTAGACTATCTAATGCTAATGTAATTTTTGCA 1388847 30 100.0 35 .............................. GCCTGCAGATCTTGAGCTTTATCTCTCCCAGCTTT 1388912 30 100.0 35 .............................. ATATTAAGAGGTCAGACAGCAAGAGCAATAGTAGA 1388977 30 100.0 35 .............................. ACTATGCAGTAATGGATTCCATTTTTGTACAAAGG 1389042 30 100.0 36 .............................. TGTGAAATCTTATCCAGAAAGTGCAGGGGCTATATT 1389108 30 100.0 35 .............................. AGATATTAAGGAAAGTAAAACATCTATAAGAATTT 1389173 30 100.0 36 .............................. AGATAAGTGTACTATATTTTGTTAATATTATATAAT 1389239 30 100.0 36 .............................. AAAGCTGTTAGTAAAAAAGGAGCAGTAGTTGAAAAG 1389305 30 100.0 36 .............................. AAGTTGATCCTAAAGAACTTATGGATAGTTACTATT 1389371 30 100.0 36 .............................. GCTTAAATATCTCCATTCTAAGCCGTTAGAAAAAGG 1389437 30 100.0 36 .............................. AATACTGTAGGAAATTTGGCAACGGCTTTTAGCAAT T [1389445] 1389504 30 83.3 35 ...T....A......GGA............ ATATACAATGAAGTAGCTAATGTAGCTAGAGAGAT 1389569 30 83.3 0 ........A........A.....C...C.G | AC [1389591] ========== ====== ====== ====== ============================== ====================================== ================== 122 30 99.7 36 GTTGAACCTTAACATAAGATGTATTTAAAT # Left flank : CCCAACCTCTTTAAGCTTTAAATGGGCTGCAATGCTTTGAGTCCATTTGTTACAGTGAAACTAGCTTAGTATATTGATATTAGGCTAGTTTTTGTGTTTCAAATAATGTTAATAATATAAAATGGAGGAGGGGGATATTTGGTTTATATAAGGTAAACATTAACATGTAATGTACACATTCATGGGTTTGGGGTCTTCTGACAGTTATCCTTTTAAGTTTTGTAAAAGACAGCTCTAGTGGGTAAGGTTGTTAAAAGCTAAGGAATGATTTTAAAATATATATGATTTAAGTAGGTATTATATTGAGTTAAAATTAAAAACACTTTTCCAACCAATTTTTAAAATAAAAGTGCCTTAAGTCATTGAAATACAATAGTTTAAAGAACATTTTTGGTTCAGTTACTAAAAAACTAAAAACGATTGGAAAAATTTCAACTAAACTCTTTATTATCAATACTTTTAGGATTATAATAAAAATAAAGAATGCCTATTTTACACTA # Right flank : GTGGGTTTGGGCTTTAGCCCATTCATTCCCCAAGTAATAGTAAAGAATATTTGTAATTGAATATAAATGATATCATAAGAATGATTCTTTCCACTCTTAGTTGAAAACTTAAATTTTTACATAAATAAAGCAAGTTTGCTGCACAAAATGATTGCAAATATATTTTAATATCAACTAACTCTGGAAAGAACCATTCTTAAGTGGTAACCCCCGCCCTATGTGGTTAATATTATGTATTATAGCAATTTAATGGAGTAGTGCATGGTAAATGGTATACCAATTTATATAAATCAAGCTTTAGTGTTAGACTTGGCTGCATTAATGTTTGACGGATTTGAAGAAAGTAGAAATGTTAGGAATCGTGAAGAGGCAGAAGTTAATTTTAGAAAAACGCAAGAGAATAGATCTCAGGAAACTATACAAAAAAAAGCTGTTGTTAATAACGAAAATGATTCAGGAAATTTTCAGGGCGAAATAGAATTTGAAAAAGATGTTAATTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 2150656-2148956 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033465.1 Clostridium sp. JN-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================================== ================== 2150655 30 100.0 35 .............................. ATGTTACAAGATGTAGTATTTAATACTACATAATA 2150590 30 100.0 33 .............................. CAACTTGTATATAGTTCCTTTTAACTTCAACCA 2150527 30 100.0 35 .............................. GTAAAAGAATTATTACCATTGCCTTGTATTAGATT 2150462 30 100.0 36 .............................. TAATTAACCATTTGTTTTAATATTACTTTCTTTAAC 2150396 30 100.0 36 .............................. CACCAAACAAAACCTAACCAATATGCTTTTTCTTCA 2150330 30 100.0 36 .............................. CATTTATTTCTCCAGATTTAACACCTTTATATATTA 2150264 30 100.0 36 .............................. ATTTTTGATTAATAATATAATTATATGCACTAACTG 2150198 30 100.0 35 .............................. TAAAGCATAGCCAAACATTGCCATGTACTTTGCGG 2150133 30 100.0 34 .............................. TCTTTTGGATAATTTAAGATAGCAGCAATAACAT 2150069 30 100.0 35 .............................. CCAATTAATTCTGAAATTGGTCTCTTAAAATATTG 2150004 30 100.0 35 .............................. GAAAATCCAAACTGGATAGTTGTAGAGGTTGTAAT 2149939 30 100.0 36 .............................. AGTATTATTATATTTTATACAATAAGTGAATTTTTA 2149873 30 100.0 36 .............................. TTTGTTATAGCTTCAATATAATCATTATAAATATTA 2149807 30 100.0 35 .............................. TCAAATACCCCACTCTTGTTTATACCAATCCACCA 2149742 30 100.0 37 .............................. GTCTTTAATTTACCAGTATGATATAATTGTTCAGCTG 2149675 30 100.0 36 .............................. TATAAATTAAACGACTCTTTTTCTTTACATGAAAAA 2149609 30 100.0 36 .............................. GCTTGTAAATCAATAGTGCTATTACTATTTATTTTA 2149543 30 100.0 36 .............................. GTGAAGAATATTGTAATGAGTTAATTAATAGAAGTT 2149477 30 100.0 36 .............................. AAGACTCATCAGAGAACTTTTTAACAGAATAATTAA 2149411 30 100.0 36 .............................. TAATCATAGTATGACTTAAGATTTTTTAATGGTTTA 2149345 30 100.0 35 .............................. GCAACTCTATATTGCAACTCTAAAATTTCTCTACT 2149280 30 100.0 35 .............................. CCGACCGTAGTTGTAACTGGTGTTGCATCTTTTGC 2149215 30 100.0 35 .............................. AAACAATGTGTGGATTTTGTTAAATCATTTGAGGG 2149150 30 93.3 131 ...........................C.G TGGGTTTGGGCTTTAGCCCATTCATTCCCGAAGTAATAGTAAAGAATATCTATTATTGATATAAGTAACTGCTGATAAAAGAATGCTTAATCAAATAGGAGCAAGGTTGCAATATGCATCACTTAAAGACA CA [2149124] 2148987 30 83.3 0 ................GA.....C...C.G | CA [2148962] ========== ====== ====== ====== ============================== =================================================================================================================================== ================== 25 30 99.1 39 GTTGAACCATAACATGATATGTATTTAAAT # Left flank : GCACGTCCTCGAAAAAAATTAGAAGAAATAATACATTATGAAAGCTTCAAATAATGTACTTGAAAAATTCATGTAGATACTAAAAAAGTATGTAAATTTTATAAAATAAAAGGCTGTAAAAATTATGCTCAAGGTTAAATTAAAATTTGACTTGTTTACGCAGCGTAAGCATTTATACTTAATTTATCTGGGAAAGAAGCTTTTTATAAAAAATTGAATCTTAGAAAAATGAAAACAGGTATGGCATTCTTCTGTAATTCAGAAAAAATGCAGACAAAAGGCTTTATTGAATAAATTTTATATTGAGCTAAGATTAAAAACATTTTTCCAATCAACTTATAAAACCAAAGTGCCTTAAGCAATTCAAATCCAACAGCTTAAAGCACTTTTGTTTTTGAAATTGCAAAAAATCAAAAACGGTTGGAAAAATTTTAGCTAAACTCTTTATTATCAATACTTTAAGGATTATAATGAAAATAAAGAATGGCTATTTTGTATTA # Right flank : TAGGTTTGGGCTTTAGCCAATTCATTCCCGAAGTAATGGTAAAGAATATCTGTTATTGATATAAGAAACTGTTGATAGAAGGATATTTACGAGGATAGGAATATCAAGATTTTGTAATGATTTTGAGATTAAGTAATATAAATAGTAATTTGTAAGTGTTTAGGAAAGAAGGCTATGCAATAGTATGGGTAGAAAAGTTACAAATAAAAAGTTTTGGGAAAAGGTTGCCAAATTGTATACGCCAATGCAGGAAAGAAAAAATATAAAACTTTACCGAGAATTATGTGAAATTATATCAAAATCGTTGAATAATAATATGCAGGTGTTAGAATTGGCTTGTGGAACTGGACAACTTACATTTCCACTATGTAAAAAAGTAGCTAGTTGGGAAGCAACTGATTTTTCAGAGAACATGATTGAAGAAGCAAAGTTAAGAGTATCTCATTTACCTGTTACTTTTAATGTACAGGATGCAACGAACCTATCATACGAGGATGTAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCATAACATGATATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //