Array 1 447419-446961 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794854.1 Corynebacterium sp. HMSC074E01 Scaffold345, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 447418 29 96.6 32 ............................G GGCTGGGGGTCGCCGGGTAGCCAGAGCCATGC 447357 29 100.0 32 ............................. GGTCCAGCAAGCTGAGCACCAAAGCGTGAGGC 447296 29 100.0 33 ............................. CAACAGACCGCGCCACTATAACGAGTTTCCGCA 447234 29 100.0 32 ............................. GTGGGGCCCGGCGATATGCCGCATCATGGAAT 447173 29 100.0 32 ............................. GGGATAGCACCAGGGCTAGCCGTGTTCTCCTC 447112 29 93.1 32 ..............G.............G AAAGCTCTGGAAGACCTCGGCCGTTCCGGGTG 447051 29 96.6 33 .C........................... CTGTCCAAGGTTGACGGAAGCCTAGGCCCGGTA 446989 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 8 29 98.3 32 GTGCTCCCCGCGTAAGCGGGGATGAGCCC # Left flank : TGTGCTCCCCGCGTAAGCGGGGATGAGCCGATGTACGCGAAGACCAATGTGATCACCCACAAGTGCTCCCCGCGTAAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTAAGCGGGGATGAGCCGCCGGGGGGCACGTACATCACATTCCCAGACGCGTGCTCCCCGCGTAAGCGGGGATGAGCCGTGGCCGGGCGAGGCCCAGCCCGCGCAAGAGGCGTGCTCCCCGCGTAAGCGGGGATGAGCCCGATTACCGATGTTCGAGAAGTTGCCTGTGAGCGTGCTCCCCGCGTAAGCGGGGATGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA # Right flank : CAGCTCCTCAAGCAGAACGTCACCGTCCAGATCGTGCTCCCCGCGTAAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGCTCCCCGCGTAAGCGGGGATGAGCCCTCCGGTATCCACTGGTTCGGTGTATTTGGAGCGGTGCTCCCCGCGTAAGTAGGTATGAATCGGACACGCGGGAGTTAGCCCCATCGAACAACCCTTATTGCCTACTTGTGTGGCCGAGAACTTGCTATCGTCCTTCGAGGGGTTCTTACTTCGGGCCGCTTTGCTTGGTTGCAGTCGGTGCGTGAACCGCTTCATTTACCCGTGCGGCGATGAAACTGGATGGAGTCGAGGATTAAAAGTGATGTGATCAGCTAAGGTCAGTATCTGTGATTCAGGACGTCGACCCGCTCATCCATTCCCTGTACCAGGT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 447670-447519 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794854.1 Corynebacterium sp. HMSC074E01 Scaffold345, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 447669 29 100.0 32 ............................. TGGCCGGGCGAGGCCCAGCCCGCGCAAGAGGC 447608 29 96.6 32 ............................C GATTACCGATGTTCGAGAAGTTGCCTGTGAGC 447547 29 96.6 0 ............................N | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGCTCCCCGCGTAAGCGGGGATGAGCCG # Left flank : AGGTATCCGTGCTCCCCGCGTAAGCGGGGATGAGCCCATCTCACTAACCGAGTTAATGCCCCGCTTTGCGTGCTCCCCGCGTAAGCGGGGATGAGCCCCTCGGCGTGGATGCGGACATCAACGAGGTATCGTGCTCCCCGCGTAAGCGGGGATGAGCCCACGCCAAGGCGCTTCATCTCCTCACCAGTCAAGTGCTCCCCGCGTAAGCGGGGATGAGCCCGTGCCATGCTTAGCCTGCATCGCCAGGCCCTTGTGCTCCCCGCGTAAGCGGGGATGAGCCGATGTACGCGAAGACCAATGTGATCACCCACAAGTGCTCCCCGCGTAAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTAAGCGGGGATGAGCCGCCGGGGGGCACGTACATCACATTCCCAGACGC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGCTCCCCGCGTAAGCGGGGATGAGCCGGGCTGGGGGTCGCCGGGTAGCCAGAGCCATGCGTGCTCCCCGCGTAAGCGGGGATGAGCCCGGTCCAGCAAGCTGAGCACCAAAGCGTGAGGCGTGCTCCCCGCGTAAGCGGGGATGAGCCCCAACAGACCGCGCCACTATAACGAGTTTCCGCAGTGCTCCCCGCGTAAGCGGGGATGAGCCCGTGGGGCCCGGCGATATGCCGCATCATGGAATGTGCTCCCCGCGTAAGCGGGGATGAGCCCGGGATAGCACCAGGGCTAGCCGTGTTCTCCTCGTGCTCCCCGCGTAGGCGGGGATGAGCCGAAAGCTCTGGAAGACCTCGGCCGTTCCGGGTGGCGCTCCCCGCGTAAGCGGGGATGAGCCCCTGT # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTAAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-14.20,-15.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 448284-447889 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794854.1 Corynebacterium sp. HMSC074E01 Scaffold345, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 448283 29 100.0 32 ............................. AACATCGAAACGACCATACGAGTAGAACGCCA 448222 29 100.0 32 ............................. CATCCACCTTCAACGACTGCGAATAGGTATCC 448161 29 100.0 32 ............................. ATCTCACTAACCGAGTTAATGCCCCGCTTTGC 448100 29 100.0 32 ............................. CTCGGCGTGGATGCGGACATCAACGAGGTATC 448039 29 100.0 32 ............................. ACGCCAAGGCGCTTCATCTCCTCACCAGTCAA 447978 29 100.0 32 ............................. GTGCCATGCTTAGCCTGCATCGCCAGGCCCTT 447917 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 GTGCTCCCCGCGTAAGCGGGGATGAGCCC # Left flank : CCAGCCTGTGCTCCCCGCGTAAGCGGGGATGAGCCCCCGTGTGGGGTGACTCGCGGAAAATCCGGGTAGTGCTCCCCGCGTAAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCGCGTAAGCGGGGATGAGCCCCGTACTACCCCATTGCTCAGCTAACGGGCCCGGTGCTCCCCGCGTAAGCGGGGATGAGCCCCGTGGTAGACATCCACTGCTCCCCGTTGCCTAGTGCTCCCCGCGTAAGCGGGGATGAGCCCATGACGCCCCGCCGCCGCTAGTCGACCGTATCGTGCTCCCCGCGTAAGCGGGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATGTACGCGAAGACCAATGTGATCACCCACAAGTGCTCCCCGCGTAAGCGGGGATGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTAAGCGGGGATGAGCCGCCGGGGGGCACGTACATCACATTCCCAGACGCGTGCTCCCCGCGTAAGCGGGGATGAGCCGTGGCCGGGCGAGGCCCAGCCCGCGCAAGAGGCGTGCTCCCCGCGTAAGCGGGGATGAGCCCGATTACCGATGTTCGAGAAGTTGCCTGTGAGCGTGCTCCCCGCGTAAGCGGGGATGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGCTCCCCGCGTAAGCGGGGATGAGCCGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 448592-448441 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794854.1 Corynebacterium sp. HMSC074E01 Scaffold345, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 448591 29 93.1 32 NN........................... CGTACTACCCCATTGCTCAGCTAACGGGCCCG 448530 29 100.0 32 ............................. CGTGGTAGACATCCACTGCTCCCCGTTGCCTA 448469 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 GTGCTCCCCGCGTAAGCGGGGATGAGCCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCGCGTAAGCGGGGATGAGCCGTACCACCAGCAGTGGATGGATGAGGCACAACGGTGCTCCCCGCGTAAGCGGGGATGAGCCGTACCAGTAAGCTCCGCACTCTTCATACGACGAGTGCTCCCCGCGTAAGCGGGGATGAGCCGTAGACCGATCCATTTATGACATCTTGCCGGAGGTGCTCCCCGCGTAAGCGGGGATGAGCCGTCCTACTGGCCGCCAAACGAGGCGCCCAGCCTGTGCTCCCCGCGTAAGCGGGGATGAGCCCCCGTGTGGGGTGACTCGCGGAAAATCCGGGTAGTGCTCCCCGCGTAAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATGACGCCCCGCCGCCGCTAGTCGACCGTATCGTGCTCCCCGCGTAAGCGGGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTAAGCGGGGATGAGCCCAACATCGAAACGACCATACGAGTAGAACGCCAGTGCTCCCCGCGTAAGCGGGGATGAGCCCCATCCACCTTCAACGACTGCGAATAGGTATCCGTGCTCCCCGCGTAAGCGGGGATGAGCCCATCTCACTAACCGAGTTAATGCCCCGCTTTGCGTGCTCCCCGCGTAAGCGGGGATGAGCCCCTCGGCGTGGATGCGGACATCAACGAGGTATCGTGCTCCCCGCGTAAGCGGGGATGAGCCCACGCCAAGGCGCTTCATCTCCTCACCAGTCAAGTGCTCCCCGCGTAAGCGGGGATGAGCCCGTGCCATGC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [30.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 448960-448687 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794854.1 Corynebacterium sp. HMSC074E01 Scaffold345, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 448959 29 100.0 32 ............................. TACCAGTAAGCTCCGCACTCTTCATACGACGA 448898 29 100.0 32 ............................. TAGACCGATCCATTTATGACATCTTGCCGGAG 448837 29 100.0 32 ............................. TCCTACTGGCCGCCAAACGAGGCGCCCAGCCT 448776 29 96.6 32 ............................C CCGTGTGGGGTGACTCGCGGAAAATCCGGGTA 448715 29 89.7 0 ..........................NNN | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.3 32 GTGCTCCCCGCGTAAGCGGGGATGAGCCG # Left flank : CTGGGCAACGTGCTCCCCGCGTAAGCGGGGATGAGCCGCAGCACGACCCATCAACTTCAGAACACGGTCAGTGCTCCCCGCGTAAGCGGGGATGAGCCCGATCCATCGCACCCGACATCGCCTCAATCGAGGTGCTCCCCGCGTAAGCGGGGATGAGCCTTCCGTTTGGGCAACAATCAGATCGCCCATTTTGTGCTCCCCGCGTAAGCGGGGATGAGCCCTTCTCGAACATTGGGAATCGTTTCTCGTCGATGTGCTCCCCGCGTAAGCGGGGATGAGCCGACTTTTGAGCTCCTGGTGGGGTGGTTGCCGTGGTGCTCCCCGCGTAAGCGGGGATGAGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCGCGTAAGCGGGGATGAGCCGTACCACCAGCAGTGGATGGATGAGGCACAACG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCGCGTAAGCGGGGATGAGCCCCGTACTACCCCATTGCTCAGCTAACGGGCCCGGTGCTCCCCGCGTAAGCGGGGATGAGCCCCGTGGTAGACATCCACTGCTCCCCGTTGCCTAGTGCTCCCCGCGTAAGCGGGGATGAGCCCATGACGCCCCGCCGCCGCTAGTCGACCGTATCGTGCTCCCCGCGTAAGCGGGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTAAGCGGGGATGAGCCCAACATCGAAACGACCATACGAGTAGAACGCCAGTGCTCCCCGCGTAAGCGGGGATGAGCCCCATCCAC # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTAAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 449451-449117 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV794854.1 Corynebacterium sp. HMSC074E01 Scaffold345, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 449450 29 100.0 32 ............................. CAGCACGACCCATCAACTTCAGAACACGGTCA 449389 29 96.6 32 ............................C GATCCATCGCACCCGACATCGCCTCAATCGAG 449328 29 96.6 32 ............................T TCCGTTTGGGCAACAATCAGATCGCCCATTTT 449267 29 96.6 32 ............................C TTCTCGAACATTGGGAATCGTTTCTCGTCGAT 449206 29 100.0 32 ............................. ACTTTTGAGCTCCTGGTGGGGTGGTTGCCGTG 449145 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GTGCTCCCCGCGTAAGCGGGGATGAGCCG # Left flank : ACAGTTGAACTATGTAAGGACGGAAGAGCGTTATTGGTTTATTCGGCAGCTAATGAACAAGGACTCGAGTTTAAGACTCACCGGCACCATTGGCAGCCAACAGACTTTGATGGAGTCACGCTCATGGTTCGTCCCTCTCCTGAACGGAAGACTGTGCAGAGCAGAACTGGATGGTCGCAGGCACGGCAGGTCCGGTCTGCATATCGTAAACAGAAGGGGAAGTAGAAAGAACTGGGCACAGCCTATCTCTTGCTGCTGAGAAGTCGTATGTAAACTGAGCTTACGGCTCGTTAATGCGCTGTTCAGCAAGGGTGCTCCCCGCGTAAGCGGGGATGAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCCCCGCGTAAGCGGGGATGAGCCCTTGTGGACGCGGGCGACATACGCCTGGGCAAC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCGCGTAAGCGGGGATGAGCCGTACCACCAGCAGTGGATGGATGAGGCACAACGGTGCTCCCCGCGTAAGCGGGGATGAGCCGTACCAGTAAGCTCCGCACTCTTCATACGACGAGTGCTCCCCGCGTAAGCGGGGATGAGCCGTAGACCGATCCATTTATGACATCTTGCCGGAGGTGCTCCCCGCGTAAGCGGGGATGAGCCGTCCTACTGGCCGCCAAACGAGGCGCCCAGCCTGTGCTCCCCGCGTAAGCGGGGATGAGCCCCCGTGTGGGGTGACTCGCGGAAAATCCGGGTAGTGCTCCCCGCGTAAGCGGGGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTAAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //