Array 1 1185480-1180876 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066290.1 Corynebacterium striatum strain FDAARGOS_1054 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1185479 29 100.0 32 ............................. ATTTGGGATGGGTCTGTGCGTTCAGGTAAGAC 1185418 29 96.6 32 ............................G TGATGGGGTTTAGCCAGAAGCAGAAGGATGCG 1185357 29 100.0 32 ............................. GGGACCAGGGCCACGGCCTTTAGGAGGCCTTC 1185296 29 100.0 32 ............................. AGTTTGTTAGTGGCACTGCTACCGGCTAGCCC 1185235 29 100.0 32 ............................. ACCGAGCCGATGAACACTAAAGCTCGGTAGTT 1185174 29 100.0 32 ............................. ACTAAAGCTCGGTAGTTCCCACACACAGATAG 1185113 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 1185052 29 96.6 32 ............................T TTGAGCAGATGCCGGGCCGTGTGGGGGAGATT 1184991 29 100.0 32 ............................. ACCAAAAGGGCTATTTCCTTGGTATGGAAATA 1184930 29 100.0 32 ............................. GTTCTCACCCTTACGCCGGAACAGGAGCGTGA 1184869 29 100.0 32 ............................. ACCCGCGTTGCGCAGTTCACGGAACAACCAGT 1184808 29 100.0 32 ............................. GGGTTCTGGAAATGGAAAGGCCCAGCCCACCA 1184747 29 100.0 32 ............................. CCTGGATGAGGTAGCGCACGACGTCTTAGAGA 1184686 29 96.6 32 ............................G GTCTTCACGCGTGAGTTGCTTTGCTGCGCCTC 1184625 29 100.0 32 ............................. CTGACCGGCGGCCAGACCGCGACGTCCTACAC 1184564 29 96.6 32 ............................T CTTTTTGTTGGGGCGGTGGAAAGACTGATAGC 1184503 29 96.6 32 ............................G GTAAAGGAAATGTACTGGGCAGGCCGAAAGGT 1184442 29 100.0 32 ............................. TAAAAACACAAAGACCGGGAACACAAATTTAA 1184381 29 96.6 32 ............................T AGGGATGCGGTCACCCCGTTGGTGATTCGGCC 1184320 29 100.0 32 ............................. ATCGCATTCCACCGTGTGAAACCCAACGTACT 1184259 29 100.0 32 ............................. GGGCGCTGCTTCCACCCATCAGCAGGACCAGG 1184198 29 100.0 32 ............................. AATGAGGCCAACCGGCCCCATAAGCACAGCCA 1184137 29 96.6 32 ............................A GCATGTGCGCGGCGCTCGACGGCGGGAGCATC 1184076 29 100.0 32 ............................. TCACCACACAAGGCCCAGACTTCCAAGCCCTC 1184015 29 96.6 32 ............................G CCACAAGCGGCGGGCCATATCCTAGGTATTGA 1183954 29 100.0 32 ............................. GTGGTGTACCACTACCTGTCGCGCAACCTGCC 1183893 29 100.0 32 ............................. TACTGGCATCCGTTTGGGTGTTCCTGATGGGT 1183832 29 100.0 32 ............................. GACCTGGGAGCAGACCCACGCCACGGCATCAG 1183771 29 96.6 33 ............................A CCATCACACCGGCCGCCCCCACCGTCTTCACCG 1183709 29 100.0 32 ............................. CATGGGTAAATCCGGCGGTGTCCGGCGTGAGC 1183648 29 96.6 32 ............................T GCTCGCCGTAGCTGCGTGTATAGCTTTTGGGT 1183587 29 96.6 32 ............................T CCTCCGCTGGGGATGGGGAGAGTAAAAATGAA 1183526 29 96.6 32 ............................G TCTGGTTCGCGCATGCTTGAGACGTTGAATGC 1183465 29 100.0 32 ............................. CCGACGATGGGGGCGGCTGTCGTGGTTGCCGA 1183404 29 100.0 32 ............................. ACAATCGCAACAACTGCTCATGAGACTCACCA 1183343 29 100.0 32 ............................. AACTTCAGCCGACGCCTGTGGGAAACGATCGG 1183282 29 96.6 32 ............................G TCGGCGCACTGTCCGAGGCTTTAGATGGCTTC 1183221 29 100.0 32 ............................. GCAGCGACTGCAACATCTTGGGAGACGTGGCC 1183160 29 100.0 32 ............................. CATGACTAAGACCCTCGCAGACATGACCCCAG 1183099 29 96.6 32 ............................G GCTTCAGCTGATGAAGCTGGAACCGCGTTTCA 1183038 29 100.0 32 ............................. ACTTCAGACTGCGAGCCGTGTTTGAAGCCCGC 1182977 29 96.6 32 ............................G GCCACGCGGCCTGCACAATCTGTGATGTTTTC 1182916 29 96.6 32 ............................T CCCAGCTCGCGGGCAGCATCCGCCGCGCCAGA 1182855 29 100.0 32 ............................. TCCGTAAGGAAAACGCGAAGTACCGTACCGAG 1182794 29 100.0 32 ............................. ATCCTTAAGCGCCGCATTCGGGTACGTGCCAA 1182733 29 100.0 32 ............................. ACAGCACCGACGCTGTTCTGAATCTGCTTACC 1182672 29 100.0 32 ............................. TCGGCAAAAAACTAGCCCCCGACCGATTCCCC 1182611 29 100.0 32 ............................. TCGACGCAATCACTGGCGACTGTCATGAAAAC 1182550 29 100.0 32 ............................. ACTCTGACGGCACCGACCATCAAGGAGTACGA 1182489 29 100.0 32 ............................. ACCGGCTTTAACTGGAAATGGGAGGAAGCATG 1182428 29 100.0 32 ............................. GTAAAAGGGGGAGGTGCCTGATGGACTCGATT 1182367 29 100.0 32 ............................. CAGGGCAATGACCCGACCGCACGCACCCTCAA 1182306 29 100.0 32 ............................. GATTCGTAGACGAGAAAGACGCGGCTATCGTC 1182245 29 100.0 32 ............................. CCTGTTGAGCTGCTTTTTGGCTTCCAATGGGG 1182184 29 96.6 32 ............................T TGAGTAGGGCGTTTAGGAGTGTGGTATCAACC 1182123 29 100.0 32 ............................. CCCACGACTTGGCCCCAGGACACGATGTCATC 1182062 29 96.6 32 ............................G GAGGGTGCCCTGTCTGCCAACAAGATCGGCAC 1182001 29 100.0 31 ............................. CCCACGCGAACAGAAGCTAAAAGAGCGTGAA 1181941 29 100.0 32 ............................. ACCCCGCCGCGCCCGCTGGTACATGCTCCCCA 1181880 29 100.0 32 ............................. CCAATACCCATACGGGGCGAAACCTGAATCCG 1181819 29 100.0 32 ............................. TCAGCACCGACGCGTGGGAAAGTAGAAATGAC 1181758 29 93.1 32 ..........T.................G GGTTGGTTTACCTGTGATTAGGGCGTGGAGTT 1181697 29 100.0 32 ............................. AATGCGCCGTCCACGTCCGGCCGTGAGCTGGC 1181636 29 100.0 32 ............................. CAAGCAGGCCATCCACACAGCTGTTGTGGAGC 1181575 29 100.0 32 ............................. ATTCCGGCAACCTTGGATAGGATTTGCTCGGA 1181514 29 96.6 32 ............................T CTACGCCTGCACCAGCCCCACCTACCGACAGG 1181453 29 100.0 32 ............................. AAGAAAGGCACCCGCGACGGCGGCAACCGTCC 1181392 29 96.6 32 ............................G CGACCGGCTGGAACGGTGCTCTAGCAAAGACT 1181331 29 100.0 32 ............................. AGCGGTATCCCATGCGGAAGAAATCTTATTAG 1181270 29 100.0 32 ............................. ACACGGCACTCGAAGATGCGAAAACGGATCTG 1181209 29 96.6 32 ............................T TACGCGATATGGAACTGGATAAGCTCAACCAG 1181148 29 100.0 32 ............................. CAGGCGGAGAAGCCATGTCTTATGAATACGCG 1181087 29 100.0 32 ............................. TTCACAAAATTCTCTCGGTCTGGATGCGCGCT 1181026 29 96.6 32 ............................T ACGCTTGTGTGCGCGTACGGGATGCCGGGTAG 1180965 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCAGCCGCT 1180904 29 89.7 0 ................T.....A....G. | ========== ====== ====== ====== ============================= ================================= ================== 76 29 98.7 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGCGCTGCCCGAAATGCTCGTCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : TTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATACGAGCAATCCCCATTTATGTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGGGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGGGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //