Array 1 145343-158060 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 145343 29 100.0 38 ............................. TCTTTTTTCTCTTTAACAAATCTTGATATGCCAACTCT 145410 29 100.0 37 ............................. AACGACAAGCTAACGTACAGGAAAAACTCCCATGACG 145476 29 100.0 36 ............................. GTTCAATTCTGATTATATCAGACTTAAAGTCCGTTG 145541 29 100.0 38 ............................. TCAGTAGAATTTTTAAAAGATTATTTGACTTTAGGTGG 145608 29 100.0 38 ............................. GACAATAGATTATACGTGCACGTTTCAAACGGCAAAGG 145675 29 100.0 37 ............................. GTTCTAAGTCATCAATTAACTCATCAATTATTTGTAC 145741 29 100.0 37 ............................. AGCAGACACACTCTATCAAATTCCCTGCCGTCTGTTC 145807 29 100.0 37 ............................. GTATATGATTTAGAGAAGAACGATATAAGGTCGTTTA 145873 29 100.0 37 ............................. TGATATATCAAATACACCTTAAAGCCATCATCATGAC 145939 29 100.0 35 ............................. AGGGGCGGGGGAAGAAAAAAGAAAAAAAGCTATCG 146003 29 100.0 36 ............................. TTCTTTTATTTGAATATCTTTACTTTAGTCGCTATA 146068 29 100.0 37 ............................. ACTCAAACAATTTGAAGAACGATACGAAATATTAAAA 146134 29 100.0 37 ............................. ATACTATATCATAGCCCAATTTCCTACTCTGACTAAA 146200 29 100.0 37 ............................. ACATTCGATACAAAGTCATTCTCATCATCAAAAGCAG 146266 29 100.0 37 ............................. TGCAAGCATTACTATTGCCTCTTCCCTCGTTATAATA 146332 29 100.0 37 ............................. ACATCACGCATTAAATTATACTGTCGTATAGTAACTT 146398 29 100.0 37 ............................. GAGGCTATATTATTATTTTTAGAAGCTTCTTTGCTTA 146464 29 100.0 38 ............................. TTATACACCCTAACACTGCCAATTGTCAATATATTTAA 146531 29 100.0 39 ............................. TTGAAAGTGCATGTGCGTGTTACATTTTGGTATGGTGAG 146599 29 100.0 37 ............................. ACGTATAATTTAACTGCTACAAGCGGTAAGGACTATG 146665 29 100.0 38 ............................. AATTTTCTTTCAAATCATTTATACTCACATCTTTTATA 146732 29 100.0 36 ............................. AATACTACTAATTTTTCTTGTATACCCATACTCAAA 146797 29 100.0 35 ............................. AACCATTGTGGCGAATCCTTTTCCATATCTATCTG 146861 29 100.0 38 ............................. TAAATGTATCGAAACTGTCTAAGCGATCAGGAACTAAA 146928 29 100.0 36 ............................. TCCCATTACTCCATTCAATTCCTGTTGCATCTTATT 146993 29 100.0 36 ............................. AAAAAATCTTTTTTAGAAAAGATTTTTCATTTTCTT 147058 29 100.0 36 ............................. GATACTATTCGAATGCACACCAGAAAACTTATTTTA 147123 29 100.0 37 ............................. GTGCAATTAAAAACTTTATTTGCGTATTTGAATTATT 147189 29 100.0 37 ............................. CACACCAAACAGCAGTAAACTCTAACATGTCTTCAAT 147255 29 100.0 37 ............................. GTGCTTCATCTATTACTAAAAGACAACTACCTTCCTT 147321 29 100.0 37 ............................. GAGAAGCCTGTTTTTGATTTTAATTTTAAGTTGTTGG 147387 29 100.0 37 ............................. CTTCAGCTATAGCCTGTGCTATCTTGTCCTGAACATT 147453 29 100.0 36 ............................. GATTCTCCTTTTCGAACTATAACATTTCCGGTGCAA 147518 29 100.0 37 ............................. GCTGTTGTAATTGCAAAATATATAGCTCGTTTAGCAG 147584 29 100.0 37 ............................. ATAGCCAAACATCACCTCGTTGAGTGCAAGGTTGAGG 147650 29 100.0 37 ............................. CTACAAAATCACCAAAAGCCCACGCATTAATGATGTA 147716 29 100.0 35 ............................. TTCTTTCTGTGTATGATATCTTTGTAATAAATTTG 147780 29 100.0 36 ............................. AAAGGCTTGTCGAGGAAGCATTAAAAGAACTTTTTG 147845 29 100.0 37 ............................. AGGGGTTAGTTTATGCGATAAAAGTTGAAGAGTTTTG 147911 29 100.0 37 ............................. TATCTCTGCCCCTGAACTATTTAATTTTCTAACATTT 147977 29 100.0 35 ............................. TTTCTTTACAGTGATTCTTATTTTGCCCTCAACAA 148041 29 100.0 37 ............................. CATTTTTTGTCTCCTCCAGTTTTCTTAGTGTTGCTTC 148107 29 100.0 38 ............................. TTGTCAATAGACTTGAAGTTCGAAAAATCGAACTTCAA 148174 29 100.0 37 ............................. GTTTGGGGCACTCTTCAGGGGCGCCTTGCTTTCCCTG 148240 29 100.0 37 ............................. CCGGTTGCGGTTTTCTTATTTTTCGCTGGAGGCTTTC 148306 29 100.0 37 ............................. GTTCTAAGTCATCAATTAACTCATCAATTATTTGTAC 148372 29 100.0 37 ............................. TCGCTATCTCAGCATCAGTTCGGGCACGGTTGGAGAT 148438 29 100.0 35 ............................. TTTTTCTATCTTTTCAGCTTTAACAATTTCACAAT 148502 29 100.0 37 ............................. CACTTACTTTTTGTTTTACAACCTCGTTTATTTGCTC 148568 29 100.0 36 ............................. GTCGTTTTGCAGCCTGTAAAAAAGTTAGCTGATATG 148633 29 100.0 37 ............................. GTCTTTATAGCTGGATGAACAACGTCAAAAGCAATTG 148699 29 100.0 38 ............................. CACAGTAAGAGAAAAGCTAAAAGCTCTAAAAATCAATT 148766 29 100.0 38 ............................. TCCTATAGGGAGTACAGAACTATAAGAATAAGAACCGC 148833 29 100.0 38 ............................. TTGTACGTGCGGCTTCCACCGCCTCTGTTTCCATGTCA 148900 29 100.0 37 ............................. ATTATTATCCTTAAAAATTCTTTGCCAGCCCGCGTTT 148966 29 100.0 38 ............................. ATTCAGTAACGGTTTGTTCAGGTACTTTAGGTGAAACG 149033 29 100.0 37 ............................. TATTTACTTGTATTCCTGCTCACATTAGCCAAAACGG 149099 29 100.0 37 ............................. ACCGCTGCGACCTGCAGCGTAAATTGTGTTTTGAGGC 149165 29 100.0 38 ............................. AGTGTGGTGCTTTGAAAAAAAGGCAAAAACAAAACTGA 149232 29 100.0 37 ............................. CTTTCTTTTTTAAAAAATCAATTATTTGAGACAATCC 149298 29 100.0 36 ............................. TTGATGGTTTTAAAGAACCACCGGGATGGTTATGCG 149363 29 100.0 36 ............................. AAATTGTGGCGGAAAAAATTTTGAGTTATACTTTCG 149428 29 100.0 37 ............................. TTCTTCTTTGCTTTTTTTGTCTTTCATTATGAAGCTG 149494 29 100.0 36 ............................. TTGAAACTATATCGGGTTGTGGGTCTACAGAAAAAT 149559 29 100.0 36 ............................. ACAGCTCTGGACAACACGGATATGTCGGACGTACCG 149624 29 100.0 36 ............................. CGTAACGAAAGAGAAGGGGAATATCTTACTAATACA 149689 29 100.0 36 ............................. ATAGAGCTTTAGAGATAGTTAAAAAGGCTATGGAGA 149754 29 100.0 37 ............................. TTTGAATATATTTCAAGAAAAGGAATTGTTTGTTGTG 149820 29 100.0 36 ............................. AATTAGAAGAAATTAATAGAGAATTATCAAATTTAG 149885 29 100.0 37 ............................. GAACAAAGAAAACTTTATAATGCTATTAGAAAAGAAG 149951 29 100.0 38 ............................. AATTGTGGAGAGGTTATAGTGTTAGAGGGGGATAGTGC 150018 29 100.0 37 ............................. ATGTCGAGACTTTTAGACATTGCTATAAATGAATTGT 150084 29 100.0 37 ............................. AGAATGACTATTTTAGGGTTTGATACGGGTGTTTTAT 150150 29 100.0 37 ............................. AGTCCTAAAATTTGGAAATGATGGCAGGGGGTTCAGA 150216 29 100.0 33 ............................. CACAATAGGTTCTCTTTTTATTCCCACAGGTAT 150278 29 100.0 38 ............................. TTGTAATTTTTTGCTTCATCTTCTTTACCTATTAATCT 150345 29 100.0 37 ............................. ATTGATGAAAGACGTAAGCGAGAGTGAGGAAGGTTTT 150411 29 100.0 37 ............................. CTATAATAGGGTTCATCCTGATAGAAACTGGACATAA 150477 29 100.0 37 ............................. TTATCAAGCATAACGAAAGCATTATCGTCGAGTAAAG 150543 29 100.0 38 ............................. TCTATTGAATTATTATCATAATTTACTTTAAAAATTTT 150610 29 100.0 38 ............................. TACTCTTAAATTTAGAAAACACAATACATTTTTCTTCA 150677 29 100.0 37 ............................. AAAACTTTCTCATATTCAGGCTTAACAACCCATGTAT 150743 29 100.0 37 ............................. TTGCATGGGAACAAGTACGTAATAATTAAAAGTGGTA 150809 29 100.0 38 ............................. ACAGCAGAATCATTAGAAGAGTTAGAAAAGCTAATTAA 150876 29 100.0 34 ............................. TAATTATTTTACTTGGTTATTAGTTTAATCATTA 150939 29 100.0 38 ............................. TATACACAACCTCCTTTTTGTGTTCAAAAGTATTTACA 151006 29 100.0 36 ............................. GATTTGAACAAGTTAAAATCTTCGAGGTATGGATAT 151071 29 100.0 37 ............................. AAAGCATAGTTGTTAAGAACAAAATTTATCAACTCTT 151137 29 100.0 37 ............................. GTAAGATTCAACTATATTGTTAAAATAATTAGTCTGC 151203 29 100.0 37 ............................. CTTTATTACTCAAAAAATATTCATAAGCCCTGTTTAA 151269 29 100.0 37 ............................. CTAATTCCCAATTCCTTTTAAATATATACGAATCTTT 151335 29 100.0 37 ............................. ATACTTATCTCTTCTAAATGGTATCCGTCATAAATTT 151401 29 100.0 37 ............................. TAGTAATGCACTGTAACTTTTACCAGAACCTGGTGTA 151467 29 100.0 39 ............................. ATAATCAAACGGCAAACTAAAAGGAAACTTTCTCGATAT 151535 29 100.0 37 ............................. ATGAATGAGATAGCTAATTTACTTAATTCTGAAGATG 151601 29 100.0 38 ............................. TTCGGCAAGTACCCATGAATGGTGAACAGTCCGTTATG 151668 29 100.0 36 ............................. CATACTAACGTATGCGTTAACACTGATTGCGGCTAA 151733 29 100.0 37 ............................. AATTTTTTTGCGACGTTAGTAAAGCTTAGTCGTTAGG 151799 29 100.0 39 ............................. GTTAATAGTGAGTACAGTTGCAGTGCGTTTCCCTGTCTG 151867 29 100.0 37 ............................. AAGCTTTCTTTTTTTTTTTCTTTTAAGCTCTCTTCCT 151933 29 100.0 39 ............................. TATCTAAAAACTGAATAAATCTCTCCTCAGATACATTTG 152001 29 100.0 37 ............................. TTCTCAATCTATCAATTTTATAGTCTATGAAAAATAT 152067 29 100.0 37 ............................. ACTTTCTTTTGTCTTATCCATAATAAATGAGTTTTTA 152133 29 100.0 38 ............................. GATAATTTTATAGATTGTTCGTCGAAGAATGTTAAGGA 152200 29 100.0 37 ............................. GATATTCTCTTCTTTTCGAACTCTGCACATTTGGCTC 152266 29 100.0 37 ............................. ACATTTAACTTGAGAGATGTTTGTGATGCAGTTATAG 152332 29 100.0 38 ............................. CGTATTACTTGTAAATATTTTACGCTTGTCATTTTTTC 152399 29 100.0 37 ............................. GTAGTAAAGGTGAGTATTTTAGGTGATGATGTGAGGG 152465 29 100.0 37 ............................. ATAGCATAACTAAAAACTTTTCTATCAAAATCTTCAC 152531 29 100.0 37 ............................. GATAGAGGGTTATTTGAAAGAGACAGCTAAGCATTTT 152597 29 100.0 37 ............................. ATGGATTGGAACGAGCAGGAGCAGAAATATAACTGGG 152663 29 100.0 38 ............................. TTTATATCCTATGTAAGTTCGACAGAAGCACTATAGTG 152730 29 100.0 36 ............................. AGGAACTTTTTCTAAAATAATTACCTTCTGTCCTTT 152795 29 100.0 38 ............................. AGAAATTATTCTAATGCTGAAGGTAAAATTACAAAAAG 152862 29 100.0 36 ............................. ATAATTTTAATGATTTTTATGCGAGGGCTGATTTAA 152927 29 100.0 35 ............................. ATGGATTGGAACGAGCAGGAGCAGAAATATAACTG 152991 29 100.0 38 ............................. GTGAGGATAAAGGGAGATATGAGCTCAGGTCTAAAAAG 153058 29 100.0 35 ............................. ATAATTTTAATGATTTTTATGCGAGGGCTGATTTA 153122 29 100.0 38 ............................. TAACAACAGCTGCCTCTGTATTAGCTACCTCACCAATA 153189 29 100.0 36 ............................. TCAGCAAGATACCAGATAAGAATTCGATCATTTTCT 153254 29 100.0 36 ............................. AAGCAGGAAGTTGGGTTATGATGTAGTGCTGATTAC 153319 29 100.0 37 ............................. AATGTTAGGGGGTTAGTTTTTTATTTTGTAGTAACAG 153385 29 100.0 36 ............................. ATAGGCTGTATGCATTAGGGTTAATAGATCGGATAA 153450 29 100.0 37 ............................. ATATACCTGACATTATTAAATTTAACAGTGCTATTAA 153516 29 100.0 36 ............................. ACGTATAATTTAACTGCTACGAGCGGTAGGGATTAT 153581 29 100.0 36 ............................. AATTTTATAAGTGGTTTGAGTGATTATGATATAGTA 153646 29 100.0 36 ............................. GACGGAAGCTATAAATTGTCGATAACAGCTTTAGTA 153711 29 100.0 37 ............................. TATTATCAGATAAAGTTCCTTTCAGGACCAAATCTTG 153777 29 100.0 36 ............................. TCAGAATCTCTAAAAATATTCTTTCTAATTATACTG 153842 29 100.0 36 ............................. CATTATAAACATTATGTTTGCGTAAAGTGTTTTTAA 153907 29 100.0 36 ............................. ATGATATGTCTGAAATACTTAGTGATAACACTGTGA 153972 29 100.0 37 ............................. TAGGTTCCGCTTCAAGCATACTCACTAAATGCACTAA 154038 29 100.0 36 ............................. TTACTTAAAACCTTACCCTCTAATCCTTTAATATAC 154103 29 100.0 36 ............................. TTCTCTTCACGTATAATGTCTTTTAAGCACAGGTAA 154168 29 100.0 37 ............................. TCAGAACTATATGCATTAAGCCAGCGTTGCATAGTAG 154234 29 100.0 36 ............................. AAAGCCGTTTCTGTTGGATAATACGCTGAGTAATAA 154299 29 100.0 37 ............................. CAAATTTCTCTACATGTAACCTTCACTGTCTACCACC 154365 29 100.0 37 ............................. GTCAATGGGTTTACTAACCTTAACCAGTTTGAACCTT 154431 29 100.0 37 ............................. GGTTAACTGTTATGTATAATGGTCCTTTAGGATATTT 154497 29 100.0 37 ............................. CCTTATAACCATTCTTCTCACGCGGAACAAACACATC 154563 29 100.0 37 ............................. ACTCTTTAAACAGTGCTTTCATAAGATTTTCGGCATC 154629 29 100.0 36 ............................. TTGCACAACCTTCAGCCCATCCCATCCTTAAGCTTT 154694 29 100.0 37 ............................. GCACTTAAGGTTATAGGTATGTTTACTACTGGAATAG 154760 29 100.0 36 ............................. TTCTCTTCACGTATAATGTCTTTTAAGCACAGGTAA 154825 29 100.0 37 ............................. TCAGAACTATATGCATTAAGCCAGCGTTGCATAGTAG 154891 29 100.0 36 ............................. GGATATATTTTAATAAGGGTGATGGATTTAAAGAGA 154956 29 100.0 37 ............................. ATTCTCCATGCAACCCGCCATTAATTTAATAAATTAA 155022 29 100.0 36 ............................. AGTTATGTACCGTTGTTCATAGACCAGCCCGAATAG 155087 29 100.0 37 ............................. ATAAGGGGTAAGAGATATAGATTCGGGAAGTTTAAAA 155153 29 100.0 36 ............................. AAACGACAACGTATGTGGAGTATACAGGAAATGGTA 155218 29 100.0 36 ............................. GCGACGCTAAAAGGTTGACAAGGGAATCCTGCACAA 155283 29 100.0 37 ............................. GAGGCTAAAATCTTTATCTCCATCAGAAATCTGGCCC 155349 29 100.0 37 ............................. ACATGGCGATAGGTAAGTTCGTGGCTGGTGAGGCTGG 155415 29 100.0 37 ............................. GCTCTGGAACGGAGCTGGCACTGTGAAGGTGGTTATT 155481 29 100.0 37 ............................. TTCACCGCCGTAATGGTCACGGTGCCAGCAGCGCCAG 155547 29 100.0 38 ............................. TTCCAGTTATGCAATCTATATTGCCTAAAGCTCTGATA 155614 29 100.0 37 ............................. TCTACTATCATCTCTTCTGTTCCTTCAACCACATCAG 155680 29 100.0 37 ............................. GATTACAGACTTTTGGCACAGATAGAATGGTACGATG 155746 29 100.0 37 ............................. TGTGGGGATTGGGAAGGTGTTTGTCAAATTGGTTATA 155812 29 100.0 37 ............................. AAGGGAGAGCTGTTCAGAGACACAGCAAAATTTCTCG 155878 29 100.0 37 ............................. ATCTCAAGACGCTTTTATAGTCTGTTGCTGTATCTGG 155944 29 100.0 36 ............................. AATTAGAAGAAATTAATAGAGAATTATCAAATTTAG 156009 29 100.0 37 ............................. GTTAGAAGACGCAGAAGAATATTAGAACTGTTACAGG 156075 29 100.0 36 ............................. AGAATAAAGAAAAACAGGGAGAGCTCAGGAGTCTGT 156140 29 100.0 37 ............................. GAGACAGTTGCAGGAATACTTGTAGGATTGGGTGTTA 156206 29 100.0 36 ............................. TAGACATAGTGTAAAAGAATTATATCATTCTTTAGA 156271 29 100.0 36 ............................. CAAGTGTTACTATCATTTTCATTAGCCCCCAATTTA 156336 29 100.0 37 ............................. TCTATCAATTGTTGGTCTGCTTTTGGAATATTTTTGA 156402 29 100.0 37 ............................. AGGTTTGCGATAGCAAGAACTTTTGTAACAGAACAAA 156468 29 100.0 38 ............................. TTAATTCTTGATTTAATTGAGTATAAAAGACGATAACA 156535 29 100.0 38 ............................. ATGATAAAAGTTTTGGGAATAGATGCTTCATTAACCAA 156602 29 100.0 37 ............................. AAAAAATAGTCTTTGTAATAAAACTTTCTTAAGTGAA 156668 29 100.0 37 ............................. TAAGCTTTTAGTTTCTGAAGAGGTGGAATTTTCGTTG 156734 29 100.0 38 ............................. GCGTGTTCGTGTATAATGTCTCAAAACCTCGTCAATTG 156801 29 100.0 36 ............................. GAAAAGGACAAAGAAGCTATCAAACGTAAAATAGCA 156866 29 100.0 37 ............................. ACAAGCGAAAAAAGCACATTCGAGTGTTATGGACTAA 156932 29 100.0 38 ............................. TTGCTCGCACTGACGATGAGATAGCGGCGGCATATGCA 156999 29 100.0 13 ............................. TCAATGGCTAAAG Deletion [157041] 157041 29 100.0 38 ............................. TCAAAATTTACAACAGACATTTTCTCTTCTTTCTTCTC 157108 29 100.0 39 ............................. GCACAAAAACTGTGGACTACACTTTTTAAATCATTAAAG 157176 29 96.6 36 ................A............ GATACTATTCGAATGCACAATAAAAAACTTATTTTA 157241 29 100.0 37 ............................. TTGAGAATAAGGATAATCTAACGAAGGGGTAACACCA 157307 29 100.0 37 ............................. TCTCTACAGGAAATAATTTCATTAAATTATTCATAAA 157373 29 100.0 36 ............................. GCGTCTGTTATGGTTTATGCAAGGAAGCTTCTTTGT 157438 29 96.6 36 ...........................G. CAGGGTTTTGCATTTGGAACGACTTGCTCGAAATAG 157503 29 100.0 37 ............................. TTTTCTTTTCATTTGTGGATTATACTTAATTACAAAC 157569 29 100.0 37 ............................. ATGACACAAATTCAAATTTTGCAACAAGCAATAAACA 157635 29 100.0 37 ............................. TCAAGCACATCGTTGTTTGCTTCTCTGACACTATAAA 157701 29 100.0 38 ............................. GAATTCCAATTATCTGGGTTAAATATATTGTTTTTAAA 157768 29 100.0 37 ............................. AAGAACGTATCTGTCTGTCAATCATTCTGTCAAACTG 157834 29 100.0 38 ............................. GATTCACCTTTTCAGGGTATAGACGCTGGAGTAATAAA 157901 29 100.0 37 ............................. AAATATGCCCGTCTTGGAGAAAAGTCTTTCATTTTTA 157967 29 100.0 37 ............................. TTTATAGATGTATTTTTCATAGTACAGATATGCAACA 158033 28 72.4 0 ..................-.C..TCCTGT | ========== ====== ====== ====== ============================= ======================================= ================== 194 29 99.8 37 GTTTTATCTGAACTATGAGGGATGTAAAC # Left flank : TATTTGTCATAGTCACATATGATATCAATGAAAAAAGAGTTAACAAGGTGAGAAAGATTTTGAAAAAGTACTTCACATGGGTTCAAAACTCAGTGTTTGAAGGTGAAATTACGCTGGGCAAGCTTGAAAAATGTAAACGTGAACTTTTATCGGTTATAGAAAAAGATGAAGATTCAGTGTATTTTTATGAAATGGAATATAAACTTGTGTGCAATAAAAAGATTTTAGGTCAAGAGAAGAATTATGATTCTATTATAATTTAAAAATTTCAGGCCAAATCTATTGATGAACTCGTATTCCATAATAATCCATTTTGCAGCGAGGCTTATAACTATTTTAAAGTTTCTATCTTCTTTTCCTCCAAGCTTCTCAAGACTCTTTGCTATTTTATTACAAAAACCCAACTATCCCCTCGCTGCAATTTATTCTTATTGTGGAAAATTTGCTGATAGGGTATAATATAGATGTAAGATGGGAAAAGGGATATTTATTATTAATGG # Right flank : TAATGAACGAAAATGAGTGAAAATGACGAAAAATGAGATTTGAAAAGATAAGGTACCTCCTGGTAAAATACAGAATGTAAGTTGTACAACTTACGACAAAACACAACAAAGGAGGTACCCTCTTTGAAGTATACACAAAATGAAAAGATATTACAAGTAACAGAAAAAACTTTAGTTGTAGGAGTAGACATAGCGAAGGAAAGGCATGTTGGAAGAGCATTTGATTTTAGAGGAGTGGAGCTTGGCAAGAGAATAGAGTTTGAGAATAGAAAAGAAGGTATGGAAAAATTTTTGGATTGGGCAAATAAGATAATGAAAGCCAATGGCAAAGACAACATGATAGTTGGGATAGAACCTACAGGGCATTACTGGCTGTGCTTTGAGCAGTACTTAAGAGAGAATGGCATAAAAGTGGTTTTAGTGAATCCTTTTCACGTAAAAAGGAGCAAAGAACTCGATGATAATACACCAACAAAGAGCGATATAAAGGATCCGAAGAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTATGAGGGATGTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 160079-160306 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 160079 28 100.0 38 ............................ CTTCTTCAAAGCTTGCTGAAGTTCTTGAACTCTCTTAT 160145 28 100.0 38 ............................ CTCAACTTTAAGTTGCTGTAACAACGCCTGTGCTGACG 160211 28 100.0 38 ............................ CACAAGATTTTAATGATTGATGCTGTTATTCCGGATGA 160277 28 92.9 0 ...................A.....C.. | CT [160299] ========== ====== ====== ====== ============================ ====================================== ================== 4 28 98.2 38 GTTTTATCTGAACTATGAGGGATGTAAA # Left flank : ATGTCAAGAAGCAAAGCGCCCCTTTTGGTAGGAGTTCAAATCATAGAGAATGTGTTGAGGGTAAGAAGTGAAGGAAAAAGGAATTAAATGATTTTTTATAGGTAGATTGAAAAATGAGAGCGGGTGGTCGGAGTACATCCCCCATAAGGGCGAAGACCCTGCATACGAGCATAACCGACTTCCACGCCATGGTAGATGGGACGAAGGAATTGAGGGCAAATAAGCAAAGACCCTGAGAGACATGAGAGGGTAAACGCCATGGTTATTGTGGGTAAAAACCCGCCGTAATATGGTAAAATATCTAAATTAATACAAAAAGTAGGTTGAGTTTAATCTTCGCATGGTAGAATAAAGCAATAATAGCAATATCAAGAATGATATTATTTGTTTCGATAGCGAAATTTAAAGAAATCGAGAGATATTTTGAGAAAATCAAAGATACATTGAGAGAGGGATGTAAACTGAAAACAAGAAAGATTTTAATATCAAGCCTTTGAACA # Right flank : AGAATTTTGTGTCTCCAATTTATAACGTAAATTGTAAAGTTGGGTTATGTTGTTAATGCATTTTCTAATACTGGGAACTCCATTTTTCCATTTTGTACGGCGTAAGTTCTCTCGCTGTAAGTAAATATTAATTTCTAAGACACAGGCAGCTTAAAGTATCCACCTGAATTTACTTCTTGCCTTCTCAATCATGCTATTTACACATAAAGCGGTGTTTGTAGAAAGAGATTTCTTAATTCCTCAGGGTATTTCATATGGACAGAATAAAACTCTGCTTTTTCTGATATTGCAGCAATAAAATCGAGGATATTTTGGAAGGTATCCATCTCAAAGTTCTTTAAATTTCAGTACAGCTCAATCAAAAAATCGGAGGAAGAAATTCTAAGTTTGTTCTTAACTCTTGTTAAAAGCGGAAAGCTTTATCTTTTGTCATATGTTTTCTGCTATTTTGTTGGAGGTGGACAAAAGCAAGCTAAAGGTCAGCAAGAGGGTAAGCAAGT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTATGAGGGATGTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 2433976-2435109 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2433976 30 100.0 37 .............................. GATTCAAATAAAAATTTGATTTTTTAAAAAAAATCTG 2434043 30 100.0 41 .............................. GGTTTATCTTCAATAACCTTTTCTTGTTTTTGCTTTGTTAA 2434114 30 100.0 36 .............................. AAAGTTATTAAATGCTTTCCCATTAGCCCCCCACCT 2434180 30 100.0 35 .............................. TTAAACACCTTTCTTATATCATTGTCTATAGCAGA 2434245 30 100.0 36 .............................. GCTTTAACTGTGCAGGTATTATCGCTATTGGTCTGT 2434311 30 100.0 36 .............................. AATTATAACATACAAGGCGAGGGAGTTTTAGATTTT 2434377 30 100.0 37 .............................. TTTGCATTCAATGTGAATACCATTCAGTCCTACAACG 2434444 30 100.0 35 .............................. GGCTTTAGCTGTATATAATACAGGTGGCACATATA 2434509 30 100.0 39 .............................. AGAAGTTGTTACTACCCGGTGAGATAAGCGCTTTGTATA 2434578 30 100.0 36 .............................. GAATTAAAAAACATTATAAAAGAAGTAGTGTATAAT 2434644 30 100.0 38 .............................. TTAAGTTGTTCCAAAGTTTCTATCCCTTGTTCCTTCCA 2434712 30 100.0 36 .............................. GGTGCAGGCATGACCTGTACAATGTATACCGCTGCG 2434778 30 100.0 36 .............................. TAGAAAGCGAGACGTTATATGACATCATCATGAAGG 2434844 30 100.0 38 .............................. GTCTATCATTCTGTCTTGCTGTGCTACTAATATAATAT 2434912 30 96.7 38 ..............C............... ATCAAATAAGAACACACATCAGGTTTGAGAGCACCTTC 2434980 30 93.3 38 ...........C..C............... GGTAATCCCCAATCGGGATGATACCATGTTCCTTTGTA 2435048 30 86.7 2 ..............C............GGA GA Deletion [2435080] 2435080 30 76.7 0 .AGGAG.....C.T................ | ========== ====== ====== ====== ============================== ========================================= ================== 18 30 97.4 35 GTTTGTAGCCTTCCATTTGGGGATTGAAAC # Left flank : CTTCTTGAGTTCTGCCAATAGAAAATGCAGGAATAAAAATTTTAAACTCCAATTTTACTAGAAAATCTACAGCATATGCCAAACATCTGGCAGCATCTTCATAGCTGATTGCAAAATTTTCATTCCATATATGTGTTTGCAAACAAGATATTCAATTTTCCCTCTTTCTAAAATTTCTTTCACTAATATACCTCTTGACAAACAAGTGCAAGTTTATACTAAAATTTAAGCTTTATCTATCATATTTATGCTTTTTGACCAAAAGTCATATCTGTCGACCTCCAATAGCAAAATTTTAAGTCTCATATTGTATTCGGTTTCAAGCCTGCAGTACGTAGATTAGACCAAACTTCTGGCATCTGCTGGATAGACGGAAGGGTTTTATGGGCTTTTATCCCTTGGTTTTTCTGGGTTGATTTGAGTTTTTCACAGATGTTTTAATATAAAAACATTGACAGGGGTGTATAATCTTGATATAATAAAATCAAGTTCTTGAACGT # Right flank : CCAATTTGCCAAAGGGTTATAAGAAAAAATACAGCGACCAACCAGATGAGTAGCAAAAAGCTGTTGGAAAAGTAAAATTAGCAGAGTATTAATTTGGTATATACCAGTATCAAATAAAAGATAAAACATACAACTACAAAATAAAAAGAACTTCAACGAAAGGGAAAAAAAGAACGAAGGTTAAATATGTTGGGGATAGTTTTTGGAGTTGATGGGTTACAAATGGGGAAAAAGAGAATAGCTCTTTTTGAATTGGAGGCAAGAAAATTTTTTAATAATATTAATCCAAAAGTTGGGTAACCAAAATAAAAGAAATATTATCACTTAGTTTTTTATTCTGAATTCTCTTTTGAAACTCCGAACAAAAGTCATCAGTAGAGAAAATTTGTGATATCTCATTTTCGAATTCTTCCCAGAACCCATCACTACAAATAATAAATTTGTCTTTATCAAGAATTTCTGTTTCATTTTTGTAAATTTGAATCTCTGTTTGATAGTTG # Questionable array : NO Score: 8.97 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTTCCATTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 4 2449154-2450708 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2449154 30 100.0 35 .............................. TCTTTACTTTTTTCACTTCTTAACGCTGCTTGTCT 2449219 30 100.0 36 .............................. TTTATTTAAAAATCTGGAATTTTCGCACCCGAAAAA 2449285 30 100.0 36 .............................. GGTAATGAAAGAAAACCTTATTTCCCACTCCTGCAA 2449351 30 100.0 37 .............................. AGTCATATTCTTCGTTTGAGAATTCATTACCGTATAC 2449418 30 100.0 38 .............................. CCCAATTGATCAGGTGTAATTACACCACTTTTTAAAAC 2449486 30 100.0 38 .............................. TTCATCGCATCTACAGTCTGCTTGCAATGTAGTTCTGT 2449554 30 100.0 37 .............................. TAGTAAGCACCTCCTTTATTTAAAAATCTGGAATTTT 2449621 30 100.0 37 .............................. GCTTAAATTGTTCTTGCTCTAAATCTGTTCTTATTGT 2449688 30 100.0 38 .............................. AATACAAACGATGCTACATAAACTTGTAAATTTCGTGG 2449756 30 100.0 36 .............................. TATAGGAGATGTGCATTTAGGGAGTAAATATTTTGA 2449822 30 100.0 36 .............................. TATCTCTATTTCTTCCTTCTCTTTCTCATCTTTTAT 2449888 30 100.0 34 .............................. GTTTTTAGATACGGATGATTATAGCAAATTAAAG 2449952 30 100.0 36 .............................. TCGTTTTCGTAAACGACTTTAGCTTGAATATCAAGC 2450018 30 100.0 36 .............................. ATGCCAAGCTTCACAATATCCTTTGCAGCTCTGCAG 2450084 30 100.0 36 .............................. GCTAATGTCCTTACACCGATATGCAGCCTTTCAGCT 2450150 30 100.0 36 .............................. AGCGAAACTTCAAAGAAGTTCGCAAGTTTGATTTTA 2450216 30 100.0 36 .............................. TCGTTTTCGTAAACGACTTTAGCTTGAATATCAAGC 2450282 30 100.0 35 .............................. TTTAGTCCTACCATGATAACAATAAGCAGCATATA 2450347 30 100.0 38 .............................. CCGATAAGCAATAAACACACGGTCTTGGCTAAAGCATT 2450415 30 100.0 37 .............................. AGCTTTGCTGTGATGATTGCAGTTTGAGAAAAGTCAA 2450482 30 100.0 38 .............................. AAGCTGTTGTTCGTGAAATAAATCTCATTGCTAAACAG 2450550 30 100.0 35 .............................. AATTCACCTTCATCTGCCATGACCTTTACCTTCAT 2450615 30 86.7 34 .........................T.GGA GAGGGAAAGCCTGCACATTGGGGATTGGTAAGAG 2450679 30 76.7 0 .AG..G..TT.T.T................ | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 98.5 36 GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Left flank : TTTTCAACTCCCATACAATAGTCTTATGACCTGGTTTTTGTTGTTCTATCACTTTTTAATTGTGCGAAGACAGACTATTACTAATTTAAAAATTTTATTAAAACCCAGATTTTTATCGTATATTAAATTTATTTTATCATAAATATTTTGTTAGAACAGCAAATATAAAGTATTTAGATTAGCTTTGCACTTGATTATACAAACACTATCTTGATGTGCATATTTATTTGACTTATAACGAATATATTTGCTTTTTGACTAAAAGTCATTTCCGTCGACCTCCGGTGGATATTTTTTGAGGTTTATTTTGTACTCGGTTTCAGTACCTATACCACAGACTTTGAAATAATTGCTGGCAGTAGCTGGATAGACGGAAAGAATAGATGAGACTTTAGAGCTTGATTTTTCTGAACTGTGCAGGATTTTGATATGATGTACTGATATAAAAACATTGACACCATTGCATAAAGTTGATATAATAAAATCAAGCTTTCCAACGT # Right flank : CGCAAGATGAATAAAATGATAATTAGGAAAATAGTAGACATTCCAGAAGCAGCAAAAAATATACCTGTTGAACTGATAGTCAGAATACCTTTAAATAATCTGAACTGCTACAAGCTCGCCTTCTTTTATCTCATTAATAGCTTTTTTTGTATAATCAAACCAGATTTCTGCTTTGTATCTTGAATAAACATCGCTGTCATATTTCATCATGCGTCCGACAATCTCTGTATTGAACATTTTTTCACTCCTCATCATCAAACTTGAGACTATCTCGGAACTTTCTAAAAGTCATATTAAGCGGATCTTTTTTATAAAGCTGTTGACTGCTCTGGATTATACCTTTTGCAAATTTAAGCAGTGTTTTAGTTCCTCTGTCTGCCTTGTGAAGCGGTTCTGGATATCCAATCACTTCAGGAAAGTGATTTCTTGTAAGAATATCTAAAAAGTATATATTCATCGCCTGCCCCCAGTTGATAATATTCTTATCAACATGAAGAAAA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 5 2460383-2461878 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2460383 30 100.0 35 .............................. GATCGCCTTCACACACTGTAAACGAGATTATACCC 2460448 30 100.0 36 .............................. GGTCAACGATCAGTATTTTATTTCTATTCTTGACCC 2460514 30 100.0 35 .............................. TCACAGACTACATAGGTAGCAAATATTATTCAAGC 2460579 30 100.0 37 .............................. GAATCATAATTAGCAAAATCATCAAGTTCATTATTAT 2460646 30 100.0 35 .............................. ACATACTGGTTAGATCCTCCAGCAAGTCCTAACAT 2460711 30 100.0 36 .............................. ATACTTAATTTTAAGCAAAATACTAACAAAATCATC 2460777 30 100.0 38 .............................. GCCTGCATATAAGAACCATGATGAACAACTGATACAAC 2460845 30 100.0 35 .............................. TGTCATCAGGTTGTTTATATTCTACTTCTTTTACA 2460910 30 100.0 37 .............................. GGGTACAGGAGATTATTGGCATGTGCTAAGTTAGGAA 2460977 30 100.0 36 .............................. TGTCAATAATCTCTTTAGCCCTGATTAATTTGGTAT 2461043 30 100.0 36 .............................. CTATTATTTGATATATATCCAAAATCCTTTAAAGTA 2461109 30 100.0 36 .............................. TCCTCAAAATTAAATCTTCTTGAATTATTCCTAGTA 2461175 30 100.0 38 .............................. ACCTCTTTCTCTACTTTTTTTACCCTTAACATCTTATA 2461243 30 100.0 36 .............................. TCCTCAAAATTAAATCTTCTTGAATTATTCCTAGTA 2461309 30 100.0 36 .............................. TTGTATAAACCATAAAAACTTTTGTCTCGTTATAAT 2461375 30 100.0 37 .............................. CCTCTAATCGTCGAAACTTCTCTTACTTCAAAATATC 2461442 30 100.0 38 .............................. TCATTACCCGAAGATAAACCATCATTACCATCAACATA 2461510 30 100.0 36 .............................. CCAACTGTTTTTACTCTTTCTCGCCCTTCATGATAG 2461576 30 100.0 36 .............................. CTTATTTTTGTTGTGTCACCGTTAACTAAGTATCGT 2461642 30 96.7 37 ........T..................... ACTCATACTGGCATTCTTCGTAACGCTTTAAAATTTC 2461709 30 100.0 38 .............................. CCTATGTTATATGAATCTGGACCTTCATCGATGACGGG 2461777 30 90.0 2 ...........................GGA GA Deletion [2461809] 2461809 30 73.3 10 .GGGAG.....................GGT GGGAGAGAGG Deletion [2461849] 2461849 30 76.7 0 A..........TT..AG..........G.T | ========== ====== ====== ====== ============================== ====================================== ================== 24 30 97.4 34 GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Left flank : TCGAAACCAGCAGTTTTTGGCACTTTATTTAATTATACCACCTATATTCAAAAATGAAAATATTAAATTTATATCTACTTTTCAATCATTGTTTTTATCCCCATTCTAAAAGGACAAGGCTTTCTTCTAAATATTTTGTAGATTGCGCAATTAAAATTCTGTACTGTTTTAGTTTTAGTATTCTCTATAGCCATTTTACAGACAATTGCAAGTTTATACTAAAATTTGAGCTTTATTTATCATATTTATGCTTTTTGACCAAAAGTCACATCTGTCGACCTCCGATAGCAAAATTTTTAAGTTCATATTGTATTCGGTTTCAAGCCTGCAGTACGTAGATTAGACCAAACTTCTGGCAGCAGCTGGATAGACGGAAAGATTTTATGGGCTTTTATCCCTTGATTCTTCTGGGTTGATTTGAGTTTTTCACAAATGTTTTAATATAAAAACATTGACAGGGGTGTATAATCTTGATATAATAAAATCAAGCTCTTGAACGT # Right flank : TATGATCCTTCTCCGAAAAAAAGCTTGGAAAAGCCATTTTGTGGCTCCCAAGCCCTTTTAGAGTGTTGTCAGAAGCTATTATTCCTTTGCAAATACATTAATTTTTTGCAAGCGCCTTTTTAAAACCTTGACAAAGCCCTTTTATAACAAACCCCAGAACAACAATAATTGCAAAAACTTTTAACCCTTCTGCAAGTCCATTGAGCATTATTGATGCGCCAAGAAGAGAACTTAGCGACATCGCTTCTCACCTCGCAACACTTTTCTACTACTTATAATTTACCCTTTATGAAAAGCTTACAAAAGTTAATTTTTCTGCGAAGAAAATTAGAATCTAACCTGCACAAGCTGAAAAGCAAAGTTTTATAAAATCTATTTTACATAAACCATCTGACAAAACATGTCAAGAAGCTCTTGTGAGGCAAATACTTCGTATCTACCAAAAGCTTTAATCACATTGTAAATATCAGAAAATCCTAAAAACCCTTTTTCCTTTCCCC # Questionable array : NO Score: 8.93 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:-0.19, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 6 2464720-2466679 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2464720 30 100.0 39 .............................. TTCATTAATTCTTCTAAATTTCTAATAGTTCTTGCAATT 2464789 30 100.0 37 .............................. GCTTGACTCATTGAAATTTTTGAAAGCCAATCAAAGT 2464856 30 100.0 38 .............................. ACTTCTTCCTGTGTCATAACTGCAATTTCATCTTTATG 2464924 30 100.0 36 .............................. ATTTTATAATACTTGACCCTGCAAAACTTGTTATAC 2464990 30 100.0 38 .............................. TTATCTATACCTAATAAACCTGCAAAATCTTTTAATCT 2465058 30 100.0 38 .............................. CTTCACTAAAGCAATATTTCTACCATTTGAATCTTTCC 2465126 30 100.0 37 .............................. CTGATTTTTTTGCCATCAAGCAACTCAGTACCTGCTT 2465193 30 100.0 37 .............................. CTGATTTTTTTGCCATCAAGCAACTCAGTACCTGCTT 2465260 30 100.0 36 .............................. AGGTTAAATAAATGGGGCGGCTAAAGCCGCCCCAAA 2465326 30 100.0 36 .............................. ATATTCTGAGCTAATGCTTCTAACAGTTCACTGTTA 2465392 30 100.0 37 .............................. ACTGTAGCATCTTCAACATCTTTTTGCAACTGATCTA 2465459 30 100.0 36 .............................. GGCTCTAAACTGTTATACATATCAATTATTTCTTGT 2465525 30 100.0 36 .............................. GCCATACTTGTATCAACACTATATTTATACAACAAA 2465591 30 100.0 36 .............................. ATTACCTTCAAAAAATTTTTTTACAACTTCTTTATT 2465657 30 100.0 36 .............................. TTAGACCAACTATCTCCAACCCCGCCACCATTGTAC 2465723 30 100.0 36 .............................. AAGGGCTGGTTGAATTTTTTGCTTGATGTTAAAGCA 2465789 30 96.7 36 .......A...................... TCAATATTGACTACATCTGTCATTTCAGGTTTTTTA 2465855 30 100.0 36 .............................. CCGTTGAAGAAAGCCAAGCCGTCGGCTTTGGTGAGG 2465921 30 100.0 36 .............................. CGCTAACAATTGTTCAAAAACAGTTCGTGGAAAAGT 2465987 30 100.0 38 .............................. GCTTGTCAGTTCCACATTCTTTTTTAGCTGTTTCAAAG 2466055 30 100.0 35 .............................. TTGTTTGAAATCAATAAATTCGCATTGCCTTGATA 2466120 30 100.0 36 .............................. GCCTGTTTCTGTGAAATACCTGCCTTTTCAGAAATT 2466186 30 100.0 35 .............................. ATTAAATATTTTTATAAAAAGGGTGGGCACAAAGA 2466251 30 100.0 36 .............................. AATAATATAACGTTTTAATCTCCTCTGTATTTAACA 2466317 30 100.0 36 .............................. GTATAAATTAATATATCATCAAATCCTATATACCTG 2466383 30 100.0 39 .............................. CCATCACCATTAATATCAAATGCTAACCCTGTTGCATTA 2466452 30 100.0 38 .............................. AATTTAACTCTCTCTTTAAACCTTCCATAAATTTCTCG 2466520 30 100.0 36 .............................. CCATAAGGGATCCTAAAGTTGTGAATATAAGACCTC 2466586 30 100.0 34 .............................. TATATCTCATACCCAAGCGTCCTCTTTATCGCCT 2466650 30 90.0 0 ...........................GGA | ========== ====== ====== ====== ============================== ======================================= ================== 30 30 99.6 37 GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Left flank : CAGAGTTACTAACTTTAAAGTTAATAACTTTGAAGTCAATAAATATTATAACACGGTTTCAGTTAGATTTCTATTGCGTTTTTGATTTTCTGAAGTTCACGCCATCTTATGCTAAATTTAATTCTTCTTTGTAGCTTGGATCAATTATTCTTAAGCTATATACTCTTTGAGGTACTCGTGAAAGTCAAATCAAAATAGCTAGGAAGACAATGCTTTTTGAATATTATTCAAAATAAGATTTATATTCATTCATTTTGACCAAAAGTCATATCCGTCGATCTTAAGTGCAAAAATTCTGGGGTTCAATTTGGACACGGTTTCATTTAGATGTGGTAAGATTTTGAGTTGATTTCTGGCAGCTGCTGGATAGACGGAGGGGTTCGAGAGTGTTTTATCCCTTGAATTTTCTGAACTGTGTGTTATTTTGATATGATGTACTGATATAAAAACATTGACACCATTGCATAAAGTTGATATAATAAAATCAAGCTTTCCAACGT # Right flank : AGAGGGAAAAGCACCATTGGTGGATGAGAAAAAGCACTCAATGCCTAAAGACAAATCAAAATATCTTTTCTGATTTTACATATGCAATGCATTTCAATTATCCTGTATAGAGCAATCTATCCTGTCTTGATGTTTTGAAATATCAAAATTGGTATCTCTGAACAAAAAAATATTCTGAACAAAAACATATAAAGAAATTAAGTGTATAGAAGAAAATAGAGATGAAGAATAAACAAGTTTTTTAAAATTCTACTTCTTGTGGTAACATTTCCCATAAACTTCGCATAAAATTTGACCTTTCTTAAAGGTTTTAAAGCAGGTAAAATTGTAAATGCAAAGTTAAAGATTAACCTTTTACGAAAGAAAGAAGGGTTAGATGCATACGGAAAAGCTTTTTGAGGTTAAAGGTTCGATTGTACAAGCGTACATTGTTTGCAAAAGACAAGCATGGCTTTTGTCACGAAACATTGGACCATCGTCAGACAACCCATTTTTGGAGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 7 2477566-2478791 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2477566 30 100.0 35 .............................. CTATACTGAATATAACACCTACAAGCCTATCTACT 2477631 30 100.0 38 .............................. TGAGGGATATATTTTGAGTGATGGGACTTTAGATGTTG 2477699 30 100.0 38 .............................. TTCTCTACCTTAAGAACTTCTTCTAACACACTCCACAA 2477767 30 100.0 36 .............................. TTTAATGTAAACATAACTTATACAGGTCGATTAGAT 2477833 30 100.0 36 .............................. ACAATATTTTTATCAATACCTAAAAACACCTGTAAG 2477899 30 100.0 36 .............................. ATATGACAATTTGAACATCTAAAAGTTCCCATCCAG 2477965 30 100.0 38 .............................. AAAAATGAAAATAGGGCGGAATTTTTACCGCCCGCCCC 2478033 30 100.0 36 .............................. AGAAGGTGTAGATATTTTTTCAGAGAAATCAAAAAA 2478099 30 100.0 36 .............................. ATTAAACCTGTAAATACTCTTTGTAAAACATTTCCA 2478165 30 100.0 35 .............................. TAACTTTGTGAAGTAGTTAAATAAACTTCTCCCTT 2478230 30 100.0 36 .............................. ACTTAAAATCTGCTGATATAATTGCATAATCTGTTC 2478296 30 100.0 38 .............................. TCTTTTATAGCTTGCTCTAATTTCCCTATATCTTCTTT 2478364 30 100.0 36 .............................. TTTTTAAAATTAAAAATCAACCCCTTTCAAAAATTT 2478430 30 100.0 35 .............................. TGGTTATGAGCCAAATGTGCAGAGTTCGAAAAGAA 2478495 30 100.0 34 .............................. TACAGAAGGTGGTTTTTGTTAAAATTGATTGTCG 2478559 30 100.0 37 .............................. ATTAACTCTTTAGTACTTACAAATTCACCATTAACAG 2478626 30 100.0 38 .............................. AACTGTGTACATATAACTCCCTCTTTTCATTCTTCTAA 2478694 30 100.0 38 .............................. GTGTCTCTTATAGAACATTTCTTTGGTATTAAAATATT 2478762 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 19 30 100.0 36 GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Left flank : TTTGCTGTTCCACCATTTATATATCTCTTCAAAAAATAATCTGCACATATCTTTATATACCCTATTCAAGAAAATGATTCAAAAAAGATTTTACCCCTAAGTCTTTGAAATTCTAAGCAGGATAAAAACAAACGTTGACATTTATAATTCAATTCAATTCAATTTTAATAACGAATGCAATATAAGCCAAATTTCTTTTTTAAAACTGCATCTTGGTGTATATATTTGCAAAATTTATGAATAAAATCGTCATTTTGACCAAAAGTCATTTCCGTCGATCTCAAGTGCAAAAATTTCGGGGTTCAATTTGGACACGGTTTCATTTAGATGTGGTAAGATTTTGAGTTGATTTTTGGCAGCTGCTGGATAGACGGAAGGATTCAAGAGTGTTTTATCGCTTGAATTTACTGAACTGTGTGCTGTTTTGATATGATGTACTGATATAAAAACATTGACACCATTGCATAAAGTTGATATAATAAAATCAAGCTTTCCAACGT # Right flank : CTAAACATACCTAATCTCATCAGCCTTGCTCTTCTAAGTTTTTAACCTTTCTTTTGGGGAATTTTATGCAATGAAGAGGTGACCAAAGTGAACTACCATCCACCTAAAGAGGTGGAGGCTTCGTGAGAAGTTTGGTAGCAGCTAAGCTACCCTTATTCTCACAGGGTGGTTCACACACCCACTACTGACTATCTGCTTCTTTGCAGACTCGCCAGCTACCTTCGCAAGTATATTTAGCGCTCCATTTATATCTGCATTTACTACATACCCACAATCTTTGCACACGTATAGCCCTCTGTGCTTCCTGTTACTTTTCTCGACTGTCCCACACCTGTTACATCTCTGCGAAGTGTAACTCTCGTCCACTTCTACATACTCTAAACCATAATATTCACACTTCGCTTCTAACTTTCTCTTGAACCTTTCATATGGTATGTTCACAAAGTTTTGATTGTTTACAACCCCAAGATTTATTTTCTGCTTTATATCTTTCATTTCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 8 2486476-2486907 **** Predicted by CRISPRDetect 2.4 *** >NC_014392.1 Caldicellulosiruptor obsidiansis OB47, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2486476 30 96.7 36 ..C........................... TAGTACCATCCACCATACAAATCATAATCATAGTCA 2486542 30 100.0 36 .............................. TAGTACCATCCACCATACAAATCATAATCATAGTCA 2486608 30 100.0 38 .............................. CCTCCTACTCATTTTTTTAACCAGCCCGATTAGGGCTG 2486676 30 100.0 38 .............................. AATATTTTTTTGTTGCTGACACTGTCCCATACTTCTGT 2486744 30 100.0 36 .............................. TGCACAGATATACCAGATTCCAAACTGGAATGCGGT 2486810 30 100.0 38 .............................. AAAGAAAAATCAAAGTCCAAAGGTGCACTCATACCCAA 2486878 30 90.0 0 ...........................GGA | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 98.1 37 GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Left flank : GGAACCTCCTCTGCGCAAGTCTCTATTTTGAAATTATATTTTTTGCCAATATCCCCAATTTGCTTTGAAATATTAAATATTTTTTCTTTTGGCAGAACAAGGACACCATTGCTTTTTGAAGCATTCTCTGCCTTTATGCAAATTGCGCAATTAAAATTCTGTACTGTTTTAGTTTTAGTATTCTCCATATCAACTTGATAGACAATTGCAAGTTTATACTAAAATTTGAGCTTTATTTGTCATATTTATGCTTTTTGACTAAAAGTCATATCTGTCGACCTCCGGTAGCAAAATTTTTAAGCTCATATTGTATTCGGTTTCGAGCTTGCAGTACGTGGACTTGACCAAACTTCTGGCATCTGCTGGATAGACGGAAAGGTTTTATGGTCTTTTGTCCCTTGATTCTTCTGGGCTGATTTAAATTTTCCACAGATGTTTTAATATAAAAATATTTACAGAGGTATATAATCTTGATATAATAAAATCAAGCTCTTGAACGT # Right flank : AGAGGGAAAGCCTTTTCTTTGGGAATTGAAACTCAGGATTTTTGCACACGACTAATGTTATTTTAATCTAAACTTAACATTTCCTCTAACAAACACTTGCATATTTCTGATTGAAATGTTATATTTTGATTGAGGAGGGGATGAAGATAAGCGATATTAAAATCATCCAAGAGGATATTAAACACGAAGTTGGTATTGACTTGATATGCAGCCTTGCAGGTAAACTTACAAATATAAAAATTAACATTGAAGACTCAAATCTCAACGAAGAAGATAAAAAGCGAAAAATTGAAAAACTTGAAAAACTTATAGCTACTCTCTGGAAAGAAAGAGATGAAGCATACAGAGGAAACAAGGACACCATCGAAAGAGCTTACAACATATATGCTATATTTTCAGATCTAATCTCCAAAAACAAGTCAAGTTTTGTAGAGATCTTGTAAAAAGAGCTGAAGAGGAGTTGAAGAAAACTTAAAAAATCTGAGCAAAAAGAATGTAGA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCCTCCCCTTTGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //