Array 1 780-89 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSXC01000050.1 Pectobacterium fontis strain M022 Contig50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================================================================================================================== ================== 779 28 92.9 32 T............C.............. CTACCCCGCACCCGTCAATCACAATATTTCCG GA,T [772,775] 716 28 96.4 32 .............C.............. TGGCCAGGGGTCACGCCGCATTTACGCATTGC 656 28 100.0 32 ............................ ATATGTGATTACTACGGAATTACCAACGTTAC 596 28 100.0 32 ............................ CTGGTGTTGGCGCGGGGGTTATTCTTATTCGT 536 28 100.0 90 ............................ CATTCCACCGCGTGAACGCAGCACATAACCGCGTTCACTGCCTGTACGGCAGTGAACTTGCCGCTGACAGAATTTTGCGACCATAAACCT 418 27 89.3 210 T.........-.G............... ATCGCCGTGCGGTTGCAAAGGCGACACCAGACGTTCACTGCCTGTACGGCAGTGAACGTTCCACTTGAATTCCTAAATCGTCAGCGTCGTTTCTAAGCTGCCGTATAGGCAGTGAACACGCGCAGCCACACCATGACACGCAGACACACTTTCTAAGCTGCCTGTACGGCAGTGAACGGAATGCCATTATTAACTCGTCCAACACTTCTT C,GA [402,413] 178 27 89.3 32 T.........-.G............... GTTCCGACACTCGAGGAGGCGCTCGACATAAT C,GA [162,173] 116 28 75.0 0 ....................TGA.CTCT | ========== ====== ====== ====== ============================ ================================================================================================================================================================================================================== ================== 8 28 92.9 66 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CCACGGTAAAAAATTACTCTTTACGAATGATGCTGTGGATTTTCTCAATAGATATCCGTGGCCTGGAAATGTGCGCGAATTACAGGCGATTGTACATCGATTGGTTGTTTTACTTAATATCGATGTTGTCGATAAAAATAGTCTTATAGAGATTAGTAAAATAGATTCAGCCCATACTCATCGTGCTATGTGCAGTTCAGGCACTGAACTTGAGGAGGGTGAGACAGACTTGTTGAAAAAACAGGAAAGGATGCTTATCGACAGGGTTATGAGAAATACTAACGGTGATCGAGCGAAAGCGGCCGTTATTCTTGGTATAAGTCCAACAACCTTATGGCGTAAAATCAAAGATCTACACATCGGTAACTGATATCTGTATGACTCGGGTTCTACACTGTCGGTACGTCAATCGACTCAGCGAACGATACACTTTAGCGACGTTTCTAAGCTGCCTGTACGGCAGTGAACTCACGTAGTTTGTGACGCTTCGAACCAAACCC # Right flank : TTTGCGCTGCGACAAAAGCGAAATCCTATCTTTCTAAGCTGCCTGTACGGCAGTGAACCTAGGTGAGGCAATGTAGTGGTCAAGTCATA # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-3, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //