Array 1 1-301 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJYB01000123.1 Planococcus antarcticus DSM 14505 Contig149, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1 36 100.0 30 .................................... ACTTGATAGCTGAAAGCTACACTGCTGATA 67 36 100.0 30 .................................... CTTTCGTCAAACCTGTGGACGACTGACCTG 133 36 100.0 30 .................................... TTGAAATGATGAAAGCCCAGTTCGAGAACG 199 36 100.0 31 .................................... CTCAAACGCCCCCTCCCGATCAATCTTGGGA 266 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 100.0 33 GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAAC # Left flank : | # Right flank : | # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 356-54 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJYB01000006.1 Planococcus antarcticus DSM 14505 Contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 355 37 100.0 30 ..................................... ATGACACTTGCAAAGCTACAACAATATGGA 288 37 100.0 29 ..................................... CACCTTGCTTCTCGAATAGTACAGCTTAT 222 37 100.0 29 ..................................... TGGTGGTTTATATACTGGCGCTCCTGAAT 156 37 97.3 29 ....................................T ATTGAACTTAATGGAACAGCAGAATCTAC 90 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================== ================== 5 37 99.5 30 GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAACA # Left flank : TCAACGGAATTAATCAGCTTCGAACAGTTAATAAAAATAGCCCCAATCGAAGTGCGAACAGTATCAGATGAACCGATGGGAGCTTATCAATATCAATCCTTCCTATTGAAAAGCTGGCTTCACTTAGTGCATAATAAAGCTACCAATGTATGCTTTTATGATTTTCCTGAAAATGAATTAAACAAATCAGAACTAAAAGAACTTTTTCAATTTGCGACAAGTCAAGCGTGTACGATGATTTGTTTGACGACAAGTCCTCAAGTCATTAATCAAGTAGGGCTTTCAAATGTTCATTTAATTAAGCGAACAGGCGAACGATATTCGATTGAAACGCTTCATGAAGAGTTGAAATTATTTTTCGAAGATACGCCAGAATCACTTAAATCTTTAGCGAAAAATCTAGCTTACAGCGACCTTCATGAAGAGTACATCATGCTTGATCAAAAGTGGTGGGAGTTCTTAACCAGTAGAATGTGCTAATACTGCGCTCAAAATTTGAG # Right flank : ACTTGATAGCTGAAAGCTACACTGCTGATAGTTTTAGACCAATGTAATTTTAGA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 55-1081 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJYB01000094.1 Planococcus antarcticus DSM 14505 Contig105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 55 36 100.0 30 .................................... CCACTTGGAAAGATAATAACATTAGTAAGT 121 36 100.0 30 .................................... TAAACTAAAGCAAATCGTAGCGATGGCGGG 187 36 100.0 30 .................................... TAAAAGTGAAAGGCGAAGGGGAAGTGTCAA 253 36 100.0 30 .................................... TTTTGCCACCACCTTTTAGATTCCTAATAA 319 36 100.0 30 .................................... TGTCGAAGTCGAACATGCTCTCTAGTTCGC 385 36 100.0 30 .................................... TAAAGCACGTAAGCAAATTGATTCTGTGGA 451 36 100.0 30 .................................... TATAGATTGCCTAAACCCAAAATGTAATAA 517 36 100.0 31 .................................... CATGGTAGATGATTGGAATACCATGTTGCAG 584 36 100.0 30 .................................... ACATTGACCGCATCGAGCGCACGGGTTACG 650 36 100.0 30 .................................... ACACGTTCCTTTTTATTCATTTTCATCGAT 716 36 100.0 30 .................................... TGCAGCCGATGAAGGAACGTCATACTGGCC 782 36 100.0 30 .................................... CAAATCCACAACTATCCCTTTGTGGTCATA 848 36 100.0 30 .................................... TGAGAACGTAACAGATCAGCGGCTCGACTG 914 36 100.0 30 .................................... TTGTTTGTCATTTTGTTTTCCTCTTTTCGT 980 36 100.0 30 .................................... GAAAAAGCGCGTCTCTCATAGATTTCCTAC 1046 36 75.0 0 .............A........AT....TCCC..TA | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 98.4 30 GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAAC # Left flank : GTAATTTTAGAGAGTAGTAAAACCTCAAACGCCCCCTCCCGATCAATCTTGGGAG # Right flank : AAATGTACAGCATATTTTTTATTTCTCAAAAACGATGGTTTATAAGAGGCAGAGAAGAAGGCGTCAATTTTCTTCTCTGCCTCTTTTGCTTTGCCCCATTACTTTTTTCAAAATCAATCTATCATAAATGTTGTTTCACAATGATTTTGAAAAGAAATGGGGAGGAAGAAAAATGACGGATTTCAAATTGGCAATTCACCAGGACACTAGGGAAACTCAGAAACGTTACCAAGACAGAAAAATTCATATTGAAAAAAAGATGGAGGAAATTCCAAAGCAGTATGAGGGCGATATTCGGAGATACAAGAACTATTGCTGCAGCACAGCACAAGTAATTGGCGCAGAGGCGATGCTTGATTATTTGTACATCTCACTGACTGAACAGCAAGTTAAGAAAACAACGTGGGAACGCCGGCTGGCAGCTATTAGAAAGTACTTGAGTGTCATTCATAAAATAGATCTCAAAGGACAGGCTGGTGTGACGTATGAGCTTTCGGGGA # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGACCAATGTAATTTTAGAGAGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //