Array 1 79779-81576 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNZZ01000007.1 Sphingomonas palmae strain JS21-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 79779 29 100.0 32 ............................. CGTCGAGTCAGTTTGGCGCGCTCGCCGGCCTT 79840 29 100.0 32 ............................. TCTCTGCGCGCAAGCTGCTCAGCTTCCAGCCA 79901 29 100.0 32 ............................. ATCGTGCAGGCGTGGTGGGATTTGCAGGACGC 79962 29 100.0 32 ............................. CATCCCCCCTCCCCCTTCGGGGTCACGTCCCG 80023 29 100.0 32 ............................. GAGCCGGGCGGATGGGATGCGCTGAAAGGCGA 80084 29 100.0 32 ............................. ACCGCATCGGGCATTGAGCTTGGCACCTACGA 80145 29 100.0 32 ............................. TTCGCCGGCAGCACGTCGGTGATCGGCTCGAA 80206 29 100.0 32 ............................. TCCTCGAGCGTCTCACGCCTGCGCACGTGCGG 80267 29 100.0 32 ............................. TTCGCCGGCAGCACGTCGGTGATCGGCTCGAA 80328 29 100.0 32 ............................. TCCTCGAGCGTCTCACGCCTGCGCACGTGCGG 80389 29 100.0 32 ............................. TGTGATGCTCCACCCTGAAAACAGCAGGTGGA 80450 29 100.0 32 ............................. GGGCACGGCAGCAGCTTCTCGGGTTCGCTTGT 80511 29 100.0 32 ............................. CTTCACAGCGCCGGCCGCGAGCAGCGCCGAGC 80572 29 100.0 32 ............................. GAGGTGGAGATGGCCGCTCGCTGCGATCTCGC 80633 29 100.0 32 ............................. CGACAATCGAGGGCCTGGTCCGGGGCGATCAA 80694 29 96.6 32 ............................G CGAACATGCTCGACGTCCCGGCTAGGACCGCG 80755 29 100.0 32 ............................. GCCGAATGGCAGCTCCACCACCGACGTTCCCA 80816 29 100.0 32 ............................. CGAGGACGACGCCCGGCGGCTGGGCGCGGAAG 80877 29 100.0 32 ............................. GCGGCCGTGGCAATGGACCGCAGCGTTCGGGC 80938 29 100.0 32 ............................. CTGATGCACGTCGCCCGGCGGTATGACTGGGA 80999 29 100.0 32 ............................. CGCGCCATCGCCAATGCGGAAGACCTGTTCGT 81060 29 100.0 32 ............................. GATAGCCCGAAGGCGGGGCAGCGCGCGGGTTG 81121 29 100.0 32 ............................. GACCTCGACAATACCGGTGACGATAAGTGGCA 81182 29 100.0 32 ............................. GCGCTGATCGCCCATGTCCTGACGCGACACAC 81243 29 100.0 32 ............................. CACCAGGTGGAGCTATGAACGCGCTGCTGTTC 81304 29 100.0 32 ............................. ATACACCCGTCGCGTGTCATCGCCTTCCGAGG 81365 29 96.6 32 ............................G TGGCTGCGCGGGGCGGTAAACGCGACGGCGCC 81426 29 100.0 32 ............................. TTCTACGTCACCAACCCGAACCTCGGGCGATC 81487 29 100.0 32 ............................. ATTTGCAAGGGCAATTTGCAGGCGCTGGTGTG 81548 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.8 32 GGCTCCCCCGCACCCGCGGGGATCAACCC # Left flank : CGTCATTCCCGGCATGATCGACCGCATCAAGACGCTGCTGATGCCGGGGCAAGAAGGCGAGGTGATCGCAGACGCCGGCGCCGGCGCGGGAAGCGCGGCCGAAAGCAGGCGCGCGCCCTGATGCCGCTCACGGTGATCATCACCCGCGATGTCGAGGACCGCTACCGCGGGCTGCTCGGCTCGGCGATGCTCGAACTGGCACCCGGCGTCTACGCGCAGCCGCGGATGAGCGCGGGCGTGCGCGGCCGCATCTGGGCGGTTGTCGAGGAATGGCACAACCGCCTGCGCCGCGGCAGCATCGTCATGTGCTGGGCCGAACCCGCCTCCGCCGGCGGCCTAGGCCTCGCAACGCTCGGTGAGCCGCCAAAGCACGTCCTCGTCCACGATGCCCTCCTCCTCGTCCAACGCCCCCTTTCGCCGCGATCGACATTACTCAAGTCCTGAGCGCACGCTCATGCTTCTTTGACAATGTGAGCCTATTCAGGCTACTAGCATATAGA # Right flank : CTCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 82275-83096 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNZZ01000007.1 Sphingomonas palmae strain JS21-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 82275 29 100.0 32 ............................. ATATTGTGCCGTCAGCTGTGCCGACGCTGACC 82336 29 100.0 32 ............................. CAAATCCACCGGTGGTTATCAGATCCGGTGAA 82397 29 100.0 32 ............................. CCGTTCAAGGCCGGCGACGATCGGCGGGCCGC 82458 29 100.0 32 ............................. CTAGCGGCGGGCCTGCGCCCCGGAGAGAGCGG 82519 29 100.0 32 ............................. CGGGCGGGGACGTCCATGCTCACCTGGTTTCC 82580 29 100.0 32 ............................. CTAGCGGCGGGCCTGCGCCCCGGAGAGAGCGG 82641 29 100.0 32 ............................. CGGGCGGGGACGTCCATGCTCACCTGGTTTCC 82702 29 100.0 32 ............................. CTCGATCATGGAAGCGGACCGCGATCGTCGCC 82763 29 100.0 32 ............................. ACCTCGACCCGGCTCACTTCGCATCCTCCCCG 82824 29 100.0 32 ............................. GAGCGCGACGAGCTCACCGACATGCACGTGCA 82885 29 100.0 32 ............................. AAGCTGCTGCAGAAGCGCTTCCCGGGCGGGCA 82946 29 100.0 32 ............................. TTCTTGGTTGGACAGACCGCAGGCGACCGGCA 83007 29 100.0 32 ............................. TGGGTCCGACGATCAACCTGCGCGGCCTGCAA 83068 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 100.0 32 GGCTCCCCCGCACCCGCGGGGATCAACCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGAGGGCTCCCCCGCACCCGCGGGGATCAACCGGTGTCGAAGCGGACCTCGCACGCCGGGTGCAG # Right flank : CCAGCGCTTACGCGAAGTCAACCTACATCTTTTCCGCTTATCGAACAATCTTCACGCAGAGATAGCCAACGGGCGGATCACCTGCGCCGCCCGCGGACCCGTTTTCGCCTCCTTGAGCGTCAGGATTCGTTGATTATAATTCCAAGATGAAGGTAGCGGCGAGGGCGATGGCAGCGAAGAAGGCGGTTGGTCAGCGATCGTAGCGGGTTGCGGCAGGACGCCAGTTCCTGAGGCGGCCGAAGATGATCTCGATCTGGCTGCGGCGCCAGTAACGGCGCTTGTCATGCTTGAGGGGTTTATTGCGGGATCGCCGCCCCAGAATGCACGGCTGGATGCCCTCTGCCTGAAGCGCGACTCTGATCCAATCGGCGTCGTAGCCGCTGTTGACAGACAGCATTTACATCCAGAGCTGCTCGTCGAGCAGCGCTGCACCGCCAATATAGTCGCTGACTTGGGCCGCCGTCATGACGAAGCTCGTCAGGCGGCCGTTCGTATCGGCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCACCCGCGGGGATCAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA //