Array 1 1105388-1107591 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJJML010000001.1 Chryseobacterium sp. C-39 Seq1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1105388 46 93.6 30 A....-T........................................ GCGTTGCAAAATTGGCAATGTGCGCCCGGC A,C [1105389,1105392] 1105466 47 100.0 30 ............................................... AAATTTTTTTTAAAGTGTTGTGACTAAAAC 1105543 47 100.0 30 ............................................... TCTTTGGGGGACCTGGAGAAGATGCGGGTT 1105620 47 100.0 30 ............................................... TTATCTAAGAGCCAAAGGCTATACGGACTC 1105697 47 100.0 30 ............................................... CTACTTTAGGGTTGCCGCCCTGAATACCCC 1105774 47 100.0 30 ............................................... TCGTCTTAAATTCTTCATCTTTACCTGCAT 1105851 47 100.0 30 ............................................... GAAGTTAAATCATTTATATCTAAAGTTGTA 1105928 47 100.0 30 ............................................... TGGATTCAATATGATACCGAAGGCAATCCT 1106005 47 100.0 30 ............................................... TTCAAGCGGTGTAGTTCTGTTATAGGGAAC 1106082 47 100.0 30 ............................................... GAGTTGGTATGTCCCCTTTAGCCTTGTTCT 1106159 47 100.0 30 ............................................... TTCCATTAGCATCAACAAATGATGACCCCA 1106236 47 100.0 30 ............................................... CAGCATCATGTATCGCCTGATATTGAGCAT 1106313 47 100.0 30 ............................................... TTGCTTTCTGCGCATAATAACTCGATGAGT 1106390 47 100.0 30 ............................................... AAGATCATCGGTTTTACTTGTGTCGCTGTT 1106467 47 100.0 30 ............................................... TACGGAAGCTCTAACAATAGACATTCGTTT 1106544 47 100.0 30 ............................................... GGTGACTTATCTAAGCGGTGACCCTGAGCC 1106621 47 100.0 30 ............................................... ATTTGAAAAATTTCATTGTAATGGCAATCA 1106698 47 100.0 30 ............................................... ATCAGATGCTCACAATCTTGTTAGTTTTGC 1106775 47 100.0 30 ............................................... TTGTTAGTTTGTGTTCCGAAGGGTCTGTGA 1106852 47 100.0 30 ............................................... CCTTTAGGAACTTGAACAAACGAACCCGTG 1106929 47 100.0 30 ............................................... AAAGTGATTTGTTTACTAAATTAACATCCT 1107006 47 100.0 30 ............................................... GCTCCCTTTAATTGGTGGTAAACTCATAAG 1107083 47 100.0 30 ............................................... GAACCAAATTGCATGGTTCCGAAGACAATT 1107160 47 100.0 30 ............................................... TTGGTTTGGAAACAGCAGACGATAATCCGT 1107237 47 100.0 30 ............................................... ATTACGGATTGATTGAAGAAGCGTTCGGCG 1107314 47 100.0 30 ............................................... GTTTTCAATGTCCTTTGACAAAGTATTCAA 1107391 47 100.0 30 ............................................... TTAATAAAATTAGAATTGATGATGAAACAA 1107468 47 100.0 30 ............................................... TGCCCCTATCAACATTAATAAACGATACCA 1107545 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 29 47 99.8 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC # Left flank : AAAAAATCATGGATTTATAATCTTGTCTAAAGATACATGAATTAGCTCAAGAAATTCTCTTTTCTGAAGATACCAAAGGTTTTTCTATTTTTGTAGGACATTAAAATAAAATCAATGACTGTACACGATTTGGCAGGAAGCTATTCCGTTCAAGGAAGCAATCAGGTAGAAAGTGATGAGATTACTTATCAGGGAATTCTTACCCTATCTTTGGATGAAAACAACAGAATCATTGCTGAATGGATTATTGATGACCACGTTCAGCATGGAACAGGTTTTTATAAGAACGAAATTTTAGTTATCAACTTCAATTACGAAAGTGAAGATGAAATGATTTATAAAGGAGTTGCCGTTTATCACTGCATCAATAAAAACGCACTAGATGGATTTTGGTCTGAAAAACATGGTAATCCACTCTATCTAGGAAGTGAATACTGTGTAAAAATCAACACCTCTGAGTTTTTAAATTAATTTTTCAAATATTTCGAGAGAAAACTTTA # Right flank : CCTCAAAATTTAACCCATTGTTTTTCAATGGGTTTTGTTGTTTTTTAGGATTCGAAATTTAGAATAATTCAAGTTGTTGGAAGGTGGGCGGTGGTTCTTCTTTGTTTCTGGCAAAGAATATTTCTATGTCTCCAAATTGCTTGTCGGTAATACACATAATGGCTACCTTTCCTGCTTTTGGAAGATTGAACTTGGTACGTTTAATATGCACCTCAGCATTTTCTCTACTTGGGCAGTGGCGAACATACATTGAAAACTGAAATAATGTAAAGCCATCATCAATCAGACCTTTACGAAAGCGGTTGGCATCTTTCATATTGGCTTTGGTCTCCGTTGGTAAGTCGTATAATACTAAAACCCACATAATTCGGTAAGCGTTAAACCTTTCGGCATTCATTTTTCACGGTTTTGTTTTGCGGTATGATGGTTGCAGCCCGACTTGAACGGAGCTCTTTTTCTGAAAAAAGCAAAGGCAAATGTGGCTGGTTTTCAGAAAAAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //