Array 1 23692-18889 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPI01000015.1 Coprococcus catus strain MCC395 NODE_16_length_42982_cov_62.183914, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 23691 30 100.0 38 .............................. GACGAAAGTCGGCTCATCGTCGATGCCTGCCAGTTCCA 23623 30 100.0 35 .............................. ATCATCCGGCAGATCTTCTTCGGGTTGTTGATGAA 23558 30 100.0 36 .............................. GAAGCTCTCGGCCTCGTTTCTCATGCCATCTGAGCT 23492 30 100.0 35 .............................. AGGCACAATACAAAGTGAATAACAGCGTCGAGATG 23427 30 100.0 35 .............................. TGCTTTTTCAAGGTCAAGAAAATATTGTCTATACT 23362 30 100.0 37 .............................. ATCTACAGCAGTGATGAACGCATTAGTCCCGATCAGT 23295 30 100.0 36 .............................. AATTTTCGTATGAAGACGGGCATCTTGTAAGAAAGA 23229 30 100.0 38 .............................. ACCTGTCCAGTTAACGCAGTGTAATCTTCTGGAATCGT 23161 30 100.0 38 .............................. ACAAGCGCATTCTGGCGCTTCTGCAGCACAGCAGTATC 23093 30 100.0 35 .............................. AAAGTATTTGACCAGGCTTCTATCCATGCTTTTTT 23028 30 100.0 38 .............................. CAACTAGGACGGCTGATAAAATCAGTAGAATTAATTTT 22960 30 100.0 37 .............................. ATCTTGATCATCACCGGATTAGAACATGGACCGTAGA 22893 30 100.0 39 .............................. TTAAATTCCTGTATTTTTTCATATGCACTGATTTTAGAC 22824 30 100.0 36 .............................. ACACTTGTCGAGAATATTCCGAAAATTATTGAAGCT 22758 30 100.0 36 .............................. GATACTGTTTTTGCTACAGAAAAACGTAAAGTCATA 22692 30 100.0 36 .............................. ATGTTCGTCTGAACTTCGTGAATTGCATCGACAATC 22626 30 100.0 36 .............................. GAACGAAACACTGGATATGATCCTGAAAGCTGCGGC 22560 30 100.0 38 .............................. ATGGATTTGATATTGATTATCATTACAGTTAGAAAAGA 22492 30 100.0 37 .............................. GAGCCTACTTCCTCCGGTATGCGAAGCGGTGGGAAAA 22425 30 100.0 37 .............................. ACGGGGCAGTTTTAATATTTACAGCAATGTTGCAATG 22358 30 100.0 36 .............................. ATGCTTGTTAGGCGTACACAAGACGAAATAGACTTG 22292 30 100.0 35 .............................. GAAGTTAATACAGCCGATGGTATTAAGAATCTATT 22227 30 100.0 35 .............................. AGGTTAATTAAAGATAAGTATGTTCCAATACCCTA 22162 30 100.0 38 .............................. GATAATTTCCGTACAGGATTTTTGTTTGGTGAAGAGAC 22094 30 100.0 36 .............................. TCGTTTACTTCTGCTATGGTCAACCTGCCAGTTTCA 22028 30 100.0 38 .............................. TCTTTCATCTGGAAATCCTGCTTTTTAAATGCATTTAA 21960 30 100.0 36 .............................. TAAAAATTATCTGGAAATAACGGTAATTCTTTATAT 21894 30 100.0 35 .............................. GATATTTTTTAGATGATGCAGCTGTATCAATGACG 21829 30 100.0 36 .............................. TCGGTAGGATTGCTGTTTCTCTCATCATTTAATCTC 21763 30 100.0 36 .............................. CAAAAATGATCAGATGTATAAATTGCTAGAAGGTGG 21697 30 100.0 36 .............................. TTGATAAATTAGGCTTGTTAACTTAAATTCATAGAT 21631 30 100.0 38 .............................. AAAATTGGACTGTTAGAAGAACAGACAACAGAGACAAC 21563 30 100.0 37 .............................. AATCTAGCTTATTTCCAAATGAGGTATCTATTACATC 21496 30 100.0 36 .............................. TTATTTTAGGTATACATTTATTCAGCCTTTACTTCT 21430 30 100.0 35 .............................. TTATTTGTTAGATTCTACAGAACAGTATTATTTTC 21365 30 100.0 36 .............................. GAAGCCGGAAGGTGGTTATCGCCCAGAATTCTTTGA 21299 30 100.0 35 .............................. ATCCAAAACAATATACTGTCGGTAATAGACTCGTC 21234 30 100.0 37 .............................. ATCTATAATTGGATTGCATACGGTTTTCGCTTTCATT 21167 30 100.0 36 .............................. TCTGCGCATCTTTCAATGTCAAATGTGGCTTTCAAA 21101 30 100.0 35 .............................. GATAAAATGTAAATAATTGAATCTGGAATGATGTA 21036 30 100.0 36 .............................. CTTGTCGATTTCGTGAAAAAGATGAGCGACAAATTT 20970 30 100.0 35 .............................. CGCAAAAAGTGAAAGGTCAATAAAAAGTTTATTTA 20905 30 100.0 37 .............................. AAGAAGGACTATTACATAGCAGCAATTCATGAAGGTA 20838 30 100.0 37 .............................. TGATCCGGCCGGAGACGCCGCGAGATGACATCCGTGA 20771 30 100.0 37 .............................. TCAATAAGGATACGTCTGTTAAGGTAATCTGCATAAG 20704 30 100.0 39 .............................. AGAGTAAGGATCCTGGAAAACCATCTGGACATCCTTCTT 20635 30 100.0 36 .............................. TATAAAGGGAACACAAAGGACCGTATAGAATGCAGG 20569 30 100.0 35 .............................. CAAGGACGGCTGATAAAATCAGTAGAATTAATTTT 20504 30 100.0 35 .............................. TACTTATCAGGTCAATGTCGGTCTTAACTCCGGTG 20439 30 100.0 34 .............................. TGCTTTTTTAATGCACAATATACAAAACACACGA 20375 30 100.0 37 .............................. TTTACACTTTCAGCTAATTCATCCACATCTACCAAAG 20308 30 100.0 38 .............................. TTCATAGATTGCTGGAAGCTCTTTTTTAAGCTTTTTGC 20240 30 100.0 37 .............................. CTGAATCCGCCAGTTTTTTCATGCTGGCTTCAGCAGT 20173 30 100.0 35 .............................. ACGGTAGAAGGTATTCTGTCAATACACAGAACCAA 20108 30 100.0 36 .............................. TTCGCAAGTATTTTGAATGCCCGAAGATTGTAGGAG 20042 30 100.0 36 .............................. CCATTGCTGATCCTTTTGAATGTCAACAGAAGGAAG 19976 30 100.0 35 .............................. CTTTATAGAATCGTTTTATACGGTTCAACGATTCA 19911 30 100.0 35 .............................. TGTTTTAGCATCTGCTTTTCAGTTACCATACGCTG 19846 30 100.0 36 .............................. TAGAATCAAGACATATGACAAATGTTCATATGTTCG 19780 30 100.0 35 .............................. GTACATTCCACTTACAATGCTTATCGTTGGCACAC 19715 30 100.0 36 .............................. ATAGTCAAGCAAAAAATAAGAAAATGAAAGAAAAAA 19649 30 100.0 36 .............................. AAGAACTTGTTACCCCGGAACAATGGCAGGCAATTA 19583 30 100.0 38 .............................. AACGATAAACACATTACTTAAATCAATCGGCGGTATCT 19515 30 100.0 36 .............................. GCATTCCAACCCGGAGTGACATTTGTCAATTTCTCA 19449 30 100.0 36 .............................. CAATTCCCCAACCTTTACAATGAGGACATTCACAAT 19383 30 100.0 35 .............................. GTTAATGCAAACCTCAATGGCATACAGCTTTCCAA 19318 30 100.0 36 .............................. CAGATTACGGCATTTTCGTGCGAACGTTGCGGCAGC 19252 30 100.0 37 .............................. TACTTAAATACTGCATACAAGCATACTCTCCTACATC 19185 30 100.0 38 .............................. TTAACGGTAAGAGCAGCAAGCAGAAAAAAGCCGAAAAA 19117 30 100.0 37 .............................. TTAACAATCACCGCCTAAAAGACAAGCCCACATTTTA 19050 30 100.0 36 .............................. TTGTATGTATATTCAGCATAGATGCCATCTCCACTG 18984 30 100.0 36 .............................. GGTGTCGAAAGATACCGGCATTCCACAATCTACCCT 18918 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ======================================= ================== 73 30 100.0 36 GTATTAATAGAATCAGATTGGAATTTAAAG # Left flank : GCGAAGCAGGGCAGAAACGTTGGTCCCGTATCTTTAAAATTTGCAAGAAATATTTGTCACATATACAAAATTCAGTTTTTGAGGGTGAAATATCGAAACCTCAGCTGATGCAGTTGAAAAAGGAAATGCAGCCGTACATAAATGAAGAGCTTGATTCAATTATTGTTTTTAAAAGCAGGCAGGAAAAATGGCTGGATAAAGAATTTTGGGCAAAGGAGGATGATAAAACAAGTTTTATGTTATAATAGGTGGTGAAAAAGATGTCTGTATGGATTTTTTTTAATGGGCATCGGAGAGAGTGAGATGAAGGTTAAGGTTTTAAATTGTCCACCTGTAATAATGCAAAAAGTGCAGGGGGTCGACAGAGGCAAAAAATGCAGATAGAATCGGGCAACTGGAAATAATGAAGTTTAAGAGGTTAAGGCTTACAGATGTTTATTTCTGGGGTCGACAGAAATAAGTGTTGTAACCTGTGGTTTTAAAGGTGTCTTTGAACACGG # Right flank : TATTCTTAGAAAGTGACGCATTGTGTAGTTGCTTCTCTTGACGGGTAGCACACCATTGAAGTGGTGGTTATGACTGCTTAAAAAATACAGAAAAAGGTTGCTAGATAGAAGAAATACAGTGTATTATAGGAGATATGCTATATCATTTTTAATTTAAAATTTGAGAATGAAGTAATAGTATTAAACAGGTTATTCCCTGTCGATTTTGACAGGGAAATTTGATTATGCCAGCGAAACTCAGGCAGTTAACATGGATGCTTTTGAAGAGGAAGACAGATCATTTATAGTATAAAAGATAGTATAGAAGAAAGGATTTTTTATGAACATACAAATTTTCGGCACTTCAAAGTGCTTTGATTCAAAGAAGGCCATGCGTTATTTCAAGGAGCGCGGCATTAAGTATCAGTGGATTGATATGAAGGAAAAGGGGCTCAGCAAAGGGGAGTATACAAAGGTGAAACAGGCGGTAGGCGGTCTGGATGCCATGCTGAATCCGAAGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAATCAGATTGGAATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 152024-153955 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQPI01000017.1 Coprococcus catus strain MCC395 NODE_18_length_177060_cov_72.218109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 152024 36 100.0 38 .................................... GGAAACAGTGACTATGATTATGATGAAGTAGTCACGAT 152098 36 100.0 38 .................................... ACTGTGAACGATTTTTCCTGACATTCTAAGTGTCTTCA 152172 36 100.0 36 .................................... AACTCTTTCCAATATTCATCCTTACTTCTCCACATA 152244 36 100.0 37 .................................... ACACTATTAAATAATCTGTAAGTGTGAATGATTTCTC 152317 36 100.0 36 .................................... TTTTCTAACCCTTAATATATCAGTCTTTAAATCCCT 152389 36 100.0 34 .................................... CTTCTAATGTCATTTCATTAGATTTTATATTTGC 152459 36 100.0 39 .................................... TCTTACCACGATCATTATCAATAGAATAAGCACAGCTTG 152534 36 100.0 36 .................................... CAATTTTTAATTGCTTTATCAAAACTTTCCATCATC 152606 36 100.0 37 .................................... CTGATTTACCCACTTTATAAATTCTTCCCAATACTGA 152679 36 100.0 35 .................................... CATTTCTTGTTGTTATATATAATAGTTTCATTTTA 152750 36 100.0 38 .................................... GCTCTTCCGTCATATATTAAAGGAGAAAACAATGGGCT 152824 36 100.0 38 .................................... TATTGTTGTATTCGTCTTCACTTATAAGCTCAAACCAA 152898 36 100.0 38 .................................... TATCAAAAGTTTCTTGGTCAATCGCTTCACTAATGTAA 152972 36 100.0 37 .................................... ACTAAGGTAAATGATGCTGTTGAAAAACTTAAAGCAA 153045 36 100.0 38 .................................... AACGCTTTGCCAGTCTGTCTATAATTTCATTTGCTTCT 153119 36 100.0 37 .................................... CAGTATCTTTCTTTTCTTGTAAACGAAATAATTACAA 153192 36 100.0 38 .................................... AGTGACTTCGACATTCTTAAGCATTAATCTCTCTCCTA 153266 36 100.0 37 .................................... TATAGCCTTTGCCACATCAAAAACGATTCCTTTATTG 153339 36 100.0 38 .................................... AGCTTTTGTTAAATGATAATCAACCGTTGCCCCATAAT 153413 36 100.0 41 .................................... ATGTATCCGTCTTTTGTTGTCATATATAAAAGCTTCATATT 153490 36 100.0 35 .................................... AACGCTCATGAGATTGTGCGTTACGGCAATTCAGA 153561 36 100.0 34 .................................... GCGTCTAATACGCTCGTTCATAATGTTATATTCA 153631 36 100.0 37 .................................... GAATATACAGCCACGCCCATACCACTTACGCCAACAA 153704 36 100.0 38 .................................... GAGATATACTATGCGGTTAAAAAATTTAAAACAATATT 153778 36 100.0 37 .................................... AAATATCCAAGACAATTGAAAGGTGGACAAAAAACAA 153851 36 100.0 34 .................................... ATAAATTTATCAATGTTACCATCTGGATTGAACT 153921 35 91.7 0 ..............................-..C.T | ========== ====== ====== ====== ==================================== ========================================= ================== 27 36 99.7 37 ATTTGGAAATAAGATACCCCGAGAGGGGACGGAAAC # Left flank : TCAAAGACGATTATCTATGATCTTTTCCAGCAGAAAGAAGCTGTCCGGGTAACAAAGGATATCTTCCGAAAGACCAATGTGCCTCGGGAGCATAAGCACGACAAGGATATAGGCCTTGGTGTGTCACCCCATGTGCTGAAGTGTACAAAGTTGAATGGGAAAAAGTATATGATGGGGCAGTGTGAATTGAAGCTGCAGGTGATGTAAAAAGCAGTTGTCTGGTGAGAAGGAACAGTCAGTCAATAGGAGATGCGAGAATGGCGGATTGACTGACTGGCTGCTTTGAAAATATCAGATTTTAATGCAAACATGGGAAATATGTGTTAAAATAGGTGTGTGCAGCAGTTTATTAGAAAAAAAGATAATTTTGCCGCGCACCGCATAAATACTGCATTTGGAGGCGATTGTGTATGTTAGATATAAGAAAAATATACAAGAAAATGATTTGCCACGCAAAAGAGTCAGAAAAGCCAGTAAAATAGCGGGCTCTGGCGGGCAGG # Right flank : TTAATCCGCTTACATTTGATTGAGTGGAAAGTGTATTAAATATCAATAGTTGAATTAGAAAATTAAAACAGATGCAGATCTTGATCTTGCTGTAGATAGTGCATGGAAAGTATTAAATATCAATAGTTGAATTAGAAAATTAAAACCCTGTCAAGGGACGCAATTTTATCGTTACAAAACGATGAAAGGGGGATGAGTACGTGAGTCTACTGTATGTGAATGAAAATGGAGCGCTTATTGGTATTGAAGGCAACAAATGTGTGGCGAAGTACAAAGATGGCATGAAGACTTTTATTCCAATTGAGTCATTGGAAGGTATCACAATTATGGGGCAGTCGCAGGTGACGACGAAATGTATGGAAGAGTGCATGATGCGTGGGATACCTGTGACTTATTTCTCAAAAGGCGGTAGATATTTTGGACGTTTAATATCCACGGGCCATGTGAATGTTGAAAGACAGCGAAAGCAGAGCGCATTGTATGATACGGATTTTGCAGTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGGAAATAAGATACCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //