Array 1 18633-19052 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYYS01000070.1 Anaerophilus nitritogenes strain MJB2 71, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 18633 30 100.0 34 .............................. ATCCCAAGGAGTTAAAATTGGATTACTGCCCCCA 18697 30 100.0 36 .............................. ATTTTGTTCTAAGGACTCCCCAATTTTGGGGAATGC 18763 30 100.0 34 .............................. TATAATTTTGATAATAATTGTGAGAAGCTTATAT 18827 30 100.0 36 .............................. TCAACTTCTGCTAATACTTCATTTTTGTATTTTTCA 18893 30 100.0 34 .............................. TCAAGTAGACAAAGATAATATATTAATTGCTGAT 18957 30 100.0 36 .............................. AAACTTCCATTGGAATATGATACATTAAGGTTGTCG 19023 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 35 ATTTAACCTAAACATGAGATGTATTGAAAC # Left flank : TATAGACGTTCAAGGAAAATTTATAAAAAGTTTGGAATTTAAAAATAAACTGCCGATGTATTTTAGATATAAAGGTATAAAGCTTCTTGGAAATAAGGTGAATATAGAGATTCAAGAAAATAATATAGCACAGAAAATGGCTTTTGTGGCTATGGCTATTGGAATAGGAGAAAAAAATTCTTCTGTTGGAGCAGGTTATTGCACTGTAAACTAAATTTTTACAATATGAATAAAATGGTAAGATATACAAATATGAGGATCTTGCTATTTGGTATATGTAGAAACTAAGGGACTTGTTAAAATAAATTTTTTTGAAGTATAAATTTTACCAGGCAATTATGTGTTATTCTTGATATAAATATGAGTGTTTTCAATAGATTGCATAGATTTTTAAAGATGAAAATTATATAGTGAAAACTAGCTGGTAAATTTTTTCTAAAGTGTTGAAAAATAGCTACTTATAGTGTATACTGATTTTAAGAAACAGCTATTTTACTAGT # Right flank : CAGTTTTCCGAATAGGTCTGTCGGTTTTCCGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACCTAAACATGAGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 10158-10514 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYYS01000105.1 Anaerophilus nitritogenes strain MJB2 107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 10158 30 100.0 36 .............................. TCAAATAATGATACCCAATATCATTCCACTTGTTAA 10224 30 100.0 34 .............................. TACAACTAAGATATTATGAAAATTACACAATAAA 10288 30 100.0 36 .............................. TAAATTGGTATGACTTGTTGTGCTGGAATAATTACA 10354 30 100.0 35 .............................. ATGCTCTTAAAATGCTCTCTCTATAATGCTCAGTT 10419 30 100.0 36 .............................. TTTATTCTAGTATTTTGATTGATAGCTTTTGCCAAA 10485 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 99.5 36 ATTTAACCTAAACATGAGATGTATTGAAAC # Left flank : CAATATAATAATTATATTGATGTTGACGATAACAATGAAAAAGATAAAGTAATATTAAAGAATACTTTAGAATCCCTTAAAATTGAAAACAATCCATTATTATCTTTAAATTTTCAACTGAATCAACTACTTATGCTTATTAATAATCCTATGCTATTTCCTCATTTTGCATATGCAAATTTTTTAAAAGAAGAATCAAAGGAATAGACATACTAACTGTATAATATAAATCAAAACAGCAATAGGTACACATATGCACCTGTTGCTGTTTTATATAGGTGTAAATTTAAAAATTGTTCAAGTAAAATCTTTTAAAGTATAAATTTTACCAGACAACTATGTATTATTTTTGATATAAATATTAGTGTTTGCAATAGATTGTATATATTTTTAAAGATAAAAATTATATAATGAAAATTAGCTGGTAAATTTTTTGTGAAGTATTGAAAAATGGCTACTTATAGTGTATACTGATTTAAAGAAACAGCTATTTTACTAGC # Right flank : TGACTGCAAAATATAAAGACCCTAAAATAGGGTCTTTATATTTTTATCTATTATAATGAGGAGAGAGGGATTATAAAATATGAAAAATTTTTAATAGAAGTAAGGTCTACGCCAAATTGCAGCTAATGTTAAAAACCATAATAAAAGGCTACTACCTCCATAAAAATATTGTCCTGTTACTTCTTTTTTCATTTGAGGAGGTTTTGGAGAATTTAAGATTCTTCTTACTGTTTCGATTCTTCCTAGGTGTTCTTTTTCTACAAAGCCTTGCATTTTTTCTACAAGCTCTAAATTTTTTATATGTTGACTTAATAAGTCATCAGATACTTGATTTTTTACCATATCTATTTCTCTAAAAATAGCTCGATCTGGAAGATTACCGTATTTTTCCATGAAATTATCAAATTCTTTCATTTGTTCATCTGTTAAAACAAATTGATTCATCATTTGAGGAATATTGTTATTATAATTTCTTCTCATGGATAAGTCACCTCCTTTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACCTAAACATGAGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 2120-68 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYYS01000085.1 Anaerophilus nitritogenes strain MJB2 86, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2119 30 100.0 38 .............................. CCAATAAGTAGCTATGCAAAAGTCATATAACAGCCAAA 2051 30 100.0 35 .............................. AATTAACAAAAGAAATTATACAACAGATTGAAAGC 1986 30 100.0 36 .............................. GCAGTATTATTCCCTGAATATGTTTCAAGAACTGTA 1920 30 100.0 35 .............................. AAAAACAATTTCTATTTACACAGGTTCTAAATTTA 1855 30 100.0 36 .............................. TTATAGACAATGGGCTCTTGAAGTCCCTGGAGTAGG 1789 30 100.0 33 .............................. ACTAATGCTGACCTTTATGGACAAACTATTGTA 1726 30 100.0 35 .............................. GCTTATTGAGTGTGGGAATAGTGCAGGAGAGATCG 1661 30 100.0 37 .............................. TGGAGATTGATTGCTAAAAGCAATTAAACCAATAGCT 1594 30 100.0 35 .............................. CCTATATATAAGTCTGTAAATGTTCCACTGGAAAT 1529 30 100.0 34 .............................. TATGGTACAGTTTGCCCATCCATATATTGATGCG 1465 30 100.0 36 .............................. AGAGATAGCAGACCAATTAGGATATTCAAAAAGACA 1399 30 100.0 35 .............................. ACTAAAGGGGGTTTGACATGGGGAATGAAATGAAG 1334 30 100.0 36 .............................. TCTTTTAATACGTCATTATCTTTTACTACAAACATT 1268 30 100.0 34 .............................. GTTGCTAATGCTGTAACTGAAAAAGGTGTGTCTG 1204 30 100.0 36 .............................. GAATAGATTGGAATGATCCAGATGCTCAAACATGGG 1138 30 100.0 36 .............................. TAGTATAGGTGCAGCAACAATTCATTATACTAATCC 1072 30 100.0 35 .............................. ATGAAGTAGCTTGGCACGCAGGAGACGGCAGAGGA 1007 30 100.0 36 .............................. TCTGTAAGGGAAAGCTTTATAGAATATGCAGAACTA 941 30 100.0 34 .............................. AAATGGTTGGACAGGAACAGGGAGTTTAACATTG 877 30 100.0 34 .............................. CTGTTACGCCTTCGCCTGTTGTTGTAAGGGAACT 813 30 100.0 35 .............................. TTTTTTTCTGCATTGTATAAAAAAGTTCAAGATAA 748 30 100.0 37 .............................. AAATATCTAAGTTGTGATGATAAACAATATGATGCTA 681 30 100.0 34 .............................. GAAACTAACAGATATTCATCAGCGGATAAATCGG 617 30 100.0 34 .............................. TATTAATGCTAAACATATAGATAGAGATGGTAAA 553 30 100.0 35 .............................. AAATTAATCATGTCCTTATTCATGCTAACTTTTTC 488 30 100.0 35 .............................. GTACACAGTGGATCAAGAAAAGAAAAGAAATACTA 423 30 100.0 36 .............................. AACATGGAAGTAAATTCATAATCGTTGGTACTCCTT 357 30 100.0 34 .............................. AGAGAAAATAAGTAGTTTTATAGATGAAAATATC 293 30 100.0 36 .............................. GCATACATTTATATTATTTTGCATTGCATCTATTCC 227 30 100.0 35 .............................. GCTATTTCTTTATCTGTTCTTCCCATCTCAACCAT 162 30 96.7 35 .........T.................... GATTTTCTTTTCCCTTTTATATATTTGCTAAGTAT 97 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 32 30 99.9 35 ATTGAACCCCAACATAGGATGTATTTAAAT # Left flank : TTGTTCCATTTAGTCTTAAGGAGAGAATGTAGATGGGTAAAAATTTGAATTATAATTATGCTTTCCTTTTCTATGATGTTAATGAAAAAAGAGTTCAAAAGGTCTTTAAGGTTTGTAAAAAGTATTTATCTCATTTTCAAAAGTCTGTTTTCAGAGGAGAAATGACTCCATCTAAGCTGATTTCTTTGAGAACAGATTTAAATAGAGTTATTAATAAGAATGAAGATTTTGTATGTATTATAAAATTGTTAAATGGTAATGTTTTTGATGAAGAAATTTTAGGAATGCAGAGTAATAATACAGGAGAGGATTTGATAATTTGATTTTACCAAGTGAAGTATATAGTTTAACAATGCAGATGTAAGCATTTTCAATAGATTAGGTGGAATCTTAAATAAAAAAGTCAAAAATTCAAAATAGGTTGGTAAAATTTTTAAGAAATGTTGAAATATAGACATTTATAGTGTATACTAATATTTAAGAATAGCTATTTTACTAGT # Right flank : TACGCTTCTTATCTCCAAATGTAGCTAAAGTGTTAGTAGAGAATTTTGGAATCGCAGGTATGGGAACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCCCAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //