Array 1 688004-700642 **** Predicted by CRISPRDetect 2.4 *** >NC_011831.1 Chloroflexus aggregans DSM 9485, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================================================================================================================================== ================== 688004 37 94.6 35 A...................................C CCGACTGCACGAATGCGTGCAACTCGGCGTCCGAT 688076 37 97.3 38 ....................................C TTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCC 688151 37 97.3 36 ....................................C TCCGCGCGTTGGCGGCGGTCTGCGCGGTGCGGTGCG 688224 37 97.3 36 ....................................C CTCCATGCTCATCTTCCGTGATCGTCGTCATCAGCC 688297 37 97.3 38 ....................................C TTGTACCTATCGTCGGATGATCCAAACCCTGGCCGCCC 688372 37 100.0 37 ..................................... CCGGCAACCGGTGGGGTGACCGGCGCGGCAACCGGTG 688446 36 83.8 186 .............................-.C.GTGA CCTCTCGTGTCATTGCGAGCGCAGCGAGCAATCTTGCTATCCGGTTCACGCCGGTTGACGTGATAGGGTTCGGTGACCATTGGTTGTTGAAGATGTCTCGCTCCGCTCGACATGACCGGAAAGGGGATGGTGCGCGTGTGCATTGAAACCACCACACGGATTAATCCCCGCTACCGCATCACTCAC 688668 36 81.1 186 C............................-.C.GTGA CCTCTCGTGTCATTGCGAGCGCAGCGAGCAATCTTGCTATCCGGTTCACGCCGGTTGACGTGATAGGGTTCGGTGACCATTGGTTGTTGAAGATGTCTCGCTCCGCTCGACATGACCGGAAAGGGGATGGTGCGCGTGTGCATTGAAACCACCACACGGATTAATCCCCGCTACCGCATCACTCAC 688890 36 81.1 186 C............................-.C.GTGA CCTCTCGTGTCATTGCGAGCGCAGCGAGCAATCTTGCTATCCGGTTCACGCCGGTTGACGTGATAGGGTTCGGTGACCATTGGTTGTTGAAGATGTCTCGCTCCGCTCGACATGACCGGAAAGGGGATGGTGCGCGTGTGCATTGAAACCACCACACGGATTAATCCCCGCTACCGCATCACTCAC 689112 36 81.1 186 C............................-.C.GTGA CCTCTCGTGTCATTGCGAGCGCAGCGAGCAATCTTGCTATCCGGTTCACGCCGGTTGACGTGATAGGGTTCGGTGACCATTGGTTGTTGAAGATGTCTCGCTCCGCTCGACATGACCGGAAAGGGGATGGTGCGCGTGTGCATTGAAACCACCACACGGATTAATCCCCGCTACCGCATCACTCAC 689334 37 97.3 35 C.................................... ACGTGTGAAACATATCCGTACTCGCGTACAATTGA 689406 37 97.3 36 A.................................... ACGGTTTAACCAACGAGCGAAGCGCGCATGTTCAAG 689479 37 100.0 37 ..................................... CCAACCGCGACGATGTACGCAGCCGACGCCGTCCAGA 689553 37 97.3 35 A.................................... ATATCAACACTAACTCGCGTACTTATGCATCGTGC 689625 37 97.3 40 A.................................... ATGACACGGAGTACCAGCCCTCGTCTCGTTGGTATCAGTA 689702 37 100.0 38 ..................................... AATGCGGATGAGTATCGCGGCGCCAGCTAAAATAAGCC 689777 37 100.0 36 ..................................... TCGGCAGGAATACTGCCGATACCAGTACCAATATCA 689850 37 100.0 37 ..................................... TAGACAGGCGCACGTTTATGACCAACGCGCGACACTA 689924 37 100.0 37 ..................................... TCCATTGTTTCTTCTGTTTCTTCCGGTTCTTCCGTAT 689998 37 100.0 35 ..................................... TCTTGACCCGCGCCGACATGAAATTGTCCTTGTGT 690070 37 100.0 36 ..................................... CCGAGCGACTATCACTTGCGCAGCAACAGCTTGAGC 690143 37 100.0 38 ..................................... TCTTCCCCAATCTCCATATGTACTACCTCCCTCCCGCC 690218 37 100.0 36 ..................................... TTTTTCCTGCGCCCCCTGAGATGTTTGGAATTTTCT 690291 37 100.0 36 ..................................... TAGCGGTAGGTATTATGTCCGTCGTATTATCTCAAT 690364 37 100.0 36 ..................................... CGCTGTCGTCATAAGCGTCTAACCGAAGCGTGTCAT 690437 37 100.0 38 ..................................... CAGCGACGCGGCGCGCCACATTTTCATCTTCTTTTGTA 690512 37 100.0 37 ..................................... CTCTTAAAGAGTGTGTTATAATAAAGCTGCGTTGGTT 690586 37 100.0 35 ..................................... ACAAGTGATAGTCCGACCTGCCACGCGCGAACAAC 690658 37 100.0 35 ..................................... CAAAAATATCGGTTCGGTGTAGCGCGACAATCGAA 690730 37 100.0 37 ..................................... AACCAAGCCAACCCTAATGAAAGGGTTGGTATGACGA 690804 37 100.0 38 ..................................... ACAGCACCTGTGCTGCCGTGTCCGGCTGTGATGCCGCT 690879 37 100.0 38 ..................................... CGATGACGGCATCGCCGCGTAGTTGCACCACAAACCGC 690954 37 100.0 38 ..................................... CTTGACGTATACGACGGTATATGTACACCCATGCCGAC 691029 37 100.0 36 ..................................... TACCGGGAAGCATTACGTTTGAACGTAATGTGACAG 691102 37 100.0 38 ..................................... CTAAAGTATCATGACGTGTCGTGTTAATCTGTGAAACA 691177 37 100.0 39 ..................................... TCACCGATGTTGTGTAGTGTTGCGCCAACCAAGATGTGA 691253 37 100.0 37 ..................................... GTCATATTTGACGTAAGACGTGTACGTAAACAGAAGA 691327 37 100.0 35 ..................................... TTCCCGTCGGACAACGGGTGCGTGTGACCATTCAA 691399 37 100.0 37 ..................................... GCATACCAACAATTGCAAGCGCAACAATTAAACACAC 691473 37 100.0 37 ..................................... GCAACGAACTACAACGATTGCAGAACCAACAGTTTGT 691547 37 100.0 37 ..................................... AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA 691621 37 100.0 37 ..................................... AAACATCTTTCGTTCCTTGTTAAGCGAACGGCTGACA 691695 37 100.0 36 ..................................... CATGACCGTTGTGGTAGACATCTCCCTCGACGCCGT 691768 37 100.0 34 ..................................... CTGCTGGCGAGGGCGCTTTGGCGCACGATTTCGG 691839 37 100.0 40 ..................................... AGATCGCCCGGCTGGTGAACGCGATCACGGGATACTGGAA 691916 37 100.0 36 ..................................... GTGGCGGGGATCACCATCCCGTACCGACCGAGCGCC 691989 37 100.0 38 ..................................... TATACCTCATAGTAGCAAGCTGCGCCTGTATTACTGTT 692064 37 100.0 35 ..................................... CAATACAAGACCGACCGCTCCAATAACAAGCGGAT 692136 37 100.0 36 ..................................... ATAAAAATCTGTTCCACCGTTTTTTACCTTCGCGCA 692209 37 100.0 38 ..................................... CGTATCCGGCCGTCGCGTTAGAGGGCGTGCCGGATACG 692284 37 100.0 35 ..................................... CCCTAATCTTACTCTCATCTTCGCCTCCTTCGTTT 692356 37 100.0 35 ..................................... CAATACAAGACCGACCGCTCCAATAACAAGCGGAT 692428 37 100.0 35 ..................................... CGTTCTGTTTTGACCCTTCTTGTCACCGTACCGTG 692500 37 100.0 35 ..................................... TCGGCGGTTCATACGTTTACCGGGGTAACAATTAC 692572 37 100.0 36 ..................................... GAGTAATCGCCTTCTGCCCACCACACGTATGATCCG 692645 37 100.0 38 ..................................... TTAGATCGTCGGACATTCATGACGAACGCGCGGCACTA 692720 37 100.0 36 ..................................... AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT 692793 37 100.0 36 ..................................... AATATTATCTGCGCAGGGTACCCCACCTGTTATGGT 692866 37 100.0 38 ..................................... TGCTGCTTGCACACGTACGCGCAGGGCATCGCTCCACC 692941 37 100.0 37 ..................................... CCGTTGGTCGGCAGACAATACCGGGGGTCCCGGACCC 693015 37 100.0 38 ..................................... AGCGAAGACCTTCGATATTAGCCAACAGATACTTGCCA 693090 37 100.0 39 ..................................... TCTGCCGCCGTCCACGGCCACTTCGCCGCTTGCTCTACC 693166 37 100.0 35 ..................................... TCGACCCGACCACCGGGATCGCGCTCCCCACGGCC 693238 37 100.0 38 ..................................... AAGGCTAATGGCTAACGGTATTGATAACGAACTCAGAC 693313 37 100.0 39 ..................................... GAAACAAAGTGGTGCGCAGCGGCGCGAACCAAACTCTCA 693389 37 100.0 37 ..................................... GTGGAATGTGCTTGGTGAAACGAAGACGGATCGTCGC 693463 37 100.0 39 ..................................... CCATCCGTCCCGTCGCCGCTGCCACCGATGACAATCACC 693539 37 100.0 36 ..................................... GATTCTTCCTCCGGTTCGTTGACGGGACGGGTTCCC 693612 37 100.0 36 ..................................... TCAAGCTGCCCTCCGGCAAACGGATCCATTTCAAGC 693685 37 100.0 38 ..................................... AGCGCCCGCAGGAGTGTCAGCATGCGCGGGTCGGTGAG 693760 37 100.0 37 ..................................... TTGGAGATGCTTTTTACAATAGACTCGATTGTATCGT 693834 37 100.0 38 ..................................... GGGACGGATGGCGACCCGGTGCTTGTCGTCGGTGGCAG 693909 37 100.0 37 ..................................... TACCCATACACAAACCAGCGATCTGCCGGCTGGTACT 693983 37 100.0 36 ..................................... GGCGCTCGCAAAGCGCGCGAGGCCTTGACAGCGGTT 694056 37 100.0 36 ..................................... ACGTTGACTTTTTCGACATTTTTGTTATTCCTACGC 694129 37 100.0 37 ..................................... CGTATGCAAGCGCGAAGTCGTACACGCGCACGCATAC 694203 37 100.0 34 ..................................... CTTGAAGTTCGCTATGTATTGGATGAGGAAAGAT 694274 37 100.0 39 ..................................... CCAAGCCAATCGCTTATCAACCCAAGACGATTCGATCCA 694350 37 100.0 37 ..................................... CTGGATGCGTACTACCGTATCCGGCGATATGTGCGCG 694424 37 100.0 36 ..................................... GGGTTGGCTTGGTTCTTATTCGCTGTTGCACGCAGG 694497 37 100.0 39 ..................................... CTGCGCCGCGCTCGGCCAGTTCGAGGCCGAGCCGAAAAC 694573 37 100.0 34 ..................................... CCCAATCGTGCCCGCAGGAACGATAGACAGCGCA 694644 37 100.0 40 ..................................... CTGTTTATAGATGCTACGCCGCGCGAGCTGAAGACATTCT 694721 37 100.0 35 ..................................... CAGTCGTGTCCCCATTACGCGCTTTAACTCGTATT 694793 37 100.0 35 ..................................... CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA 694865 37 100.0 38 ..................................... TCTTGATCACCATAAAGGTACTGATACCAGCGCGACGA 694940 37 100.0 35 ..................................... CTCCACCGAACGCACGTAGCGCGACAGCGGCAGAA 695012 37 100.0 38 ..................................... AGTCAGCAATTTGGCAGCGGGAGCCGACTCCTGATCGA 695087 37 100.0 38 ..................................... GACTCCGCGCTCCAGCTCTCCCCCGCGCACATCGACGC 695162 37 100.0 36 ..................................... TTGGCCGATTTGAAGATCGAGGAGCTAACCGATCCT 695235 37 100.0 35 ..................................... CGAGATGATCGGTTGGTGGCAGCAGCACGGCACGC 695307 37 100.0 38 ..................................... TTTTCGGACCTCCGCAGCGCTCGTCTCCTCCTGGTCGC 695382 37 100.0 37 ..................................... CTACCGGGTGGTCATGCCCAACGGCATGACCTACGAG 695456 37 100.0 39 ..................................... ACGGTACATGCGCGATTGAGGCAATATCCCATCTGGGAA 695532 37 100.0 37 ..................................... AAATGAAACATATAACAATGACAATGCCGTTGCGTTC 695606 37 100.0 37 ..................................... GCAACGATCTGGCCAAGCTGCTGCAACAACGGGCCGG 695680 37 100.0 37 ..................................... CGCGAGATCGAACCGCCAGCGTCGCGTTGGGTGGAAG 695754 37 100.0 35 ..................................... GATAATGAGCGATTTTGGTGTTGCATCGCTGTAGC 695826 37 100.0 38 ..................................... TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC 695901 37 100.0 37 ..................................... TCGAGCGCTAATTGCTGCACGTCCGCAAGCGAGCGCC 695975 37 100.0 36 ..................................... AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG 696048 37 100.0 35 ..................................... GCGTGACATTAGCCGCGTGATTGAGGAAATTCGGG 696120 37 100.0 35 ..................................... ACCAAATATGCAGCTCTGCCGCCACCTCGCCGTCG 696192 37 100.0 37 ..................................... CATTTCAACGCCATTTGATGCGTTATACATCCTTCTC 696266 37 100.0 38 ..................................... TCTCCGACACGCGATTGTTATCGATCCTAACCGTTGCC 696341 37 100.0 32 ..................................... TGGTGATCGCATACGCAACCGCACCGTGCTGG 696410 37 100.0 39 ..................................... AATAAATAGTTCATAATCTGTCACTTGTACATAGTTATC 696486 37 100.0 37 ..................................... CGAAGAGCGAGAAATGCTTCCCATGCCGCTTCGGTAC 696560 37 100.0 35 ..................................... ACTACGCTGACGCGCATGACTATTATTATCAGCTC 696632 37 100.0 36 ..................................... AAGTTATATTCCCCACGATCAATCACCCGGAAGTCG 696705 37 100.0 38 ..................................... TACAACGTAAACTGGTCGTCCGAAAGTGCGCCGATCAA 696780 37 100.0 36 ..................................... CAAGATGTTAAACCACAGCGTAACGCTGCGATACCA 696853 37 100.0 37 ..................................... CCGCGATGTGGAAATCAATCCCATGAGAACGGAGAAG 696927 37 100.0 35 ..................................... GCTGTCGGTAGTCATCACTATCTTCCCCACCATAC 696999 37 100.0 37 ..................................... CGATCATGGATCGCGTTGATGTATACCATTATCAAGA 697073 37 100.0 37 ..................................... CAAAGAAGGATATTGAGCGTGTCCCCCTCACGAAAAG 697147 37 100.0 37 ..................................... AGTAAGGGTAGTTTAGAAAGAACCAAAGATGCTGTGC 697221 37 100.0 36 ..................................... GTGTACAACTCAACCAAGACCTTTCCCGTAAACGCA 697294 37 100.0 38 ..................................... GCATCTGGGAAGGGAAACGTCGGCAATAAAGCGAAAGA 697369 37 100.0 35 ..................................... GTGATCGTCGTTGATTGCGCCGCGTTGCGATATGT 697441 37 100.0 38 ..................................... CTAGCCGGCTATCGGGTCGCTTCGATAGTTGGGCGGTA 697516 37 100.0 37 ..................................... CTCTTGCTTCCGGTTTTCACGAGTACCGGCAAGATGC 697590 37 100.0 35 ..................................... GTCCTGTTTCTTGCCGTTCCCTTGCTGCTGATCAC 697662 37 100.0 37 ..................................... ACGACGCGACTGCTACGACGACGCTGCGGTAGTGCGC 697736 37 100.0 39 ..................................... CAGATCGCGCGGCCATTGCACCGTCGCCCGGCATTGGCC 697812 37 100.0 36 ..................................... GGATAATACGTCTTTTTGGTACCAACGATACGTGAA 697885 37 100.0 37 ..................................... TGATGTATACCATTATCAAGACGGTACATGGTACGAA 697959 37 100.0 38 ..................................... CAGATGCTAAAACAACTGGTGCAAAAGTAACACAACGC 698034 37 100.0 35 ..................................... TTCTTAAAAATCGGAGGAGTTTACACTTTCGTGAA 698106 37 100.0 39 ..................................... ATACCGTGAAGTGCCTGTTGCCAACGTCGTATCAAAAGT 698182 37 100.0 36 ..................................... TCAATATTCACCAACCCATACGGCTCACCGTTGCCA 698255 37 100.0 36 ..................................... GCGGCATTTGTAGCGGTAAGCGCTGTTGTCGCCGTG 698328 37 100.0 37 ..................................... GGGTTACGCGATCCGCTGCAATTCGACTTTTACCCGC 698402 37 100.0 38 ..................................... TTACCCGCCGGCAGCTCTAGCCGCACCAGCCGACGCGC 698477 37 100.0 37 ..................................... CGTCTTCTATCTCCAGTCGCACGCGCGCGTTACCCGC 698551 37 100.0 38 ..................................... AGTTAAATTCGCGCTCCACCTCAACTGCCCGCACGTAG 698626 37 100.0 37 ..................................... CATACAAGCCAGCCGGCAGCGGAACAAACGCATCCTT 698700 37 100.0 37 ..................................... GCGATCGCGCTCGATGAGCAGCGTAAACTTCAGTCGT 698774 37 100.0 37 ..................................... CCTTATCGGTGACGACATGGCCGGATTCCGGTTGTAC 698848 37 100.0 38 ..................................... TGCGCAGCAGCCACGCTGCGAGCGCCGCGTCGGCGTCG 698923 37 100.0 36 ..................................... ATGCAGAGTATGCGTCCCTCGACGCGCTGGAGGTGT 698996 37 100.0 35 ..................................... TTGGCGCTGATTCCGGTTGCGACACCTTGCGCGAT 699068 37 100.0 37 ..................................... GCTTACGGCGGCGAGCGATCGTACCAGTCCCGAAGCG 699142 37 100.0 38 ..................................... GAGCCGGGGTGTGTGGCAACCTTCTTCATGGATGAGGA 699217 37 100.0 35 ..................................... GCCTTGTTCAGCGTCGTTGCCGTGATGTAGTGCGA 699289 37 100.0 38 ..................................... CTCGCGATCATCGCGGGGCAAGTCGTCGAGCGGTCGCC 699364 37 100.0 35 ..................................... CGTGCCCAACAAGAGTGATCACACTCTTGTTTATG 699436 37 100.0 37 ..................................... TCGACGCGCCGCACCGTGCGCAACTTACCACCTCCGT 699510 37 100.0 36 ..................................... ACTTGCCCAACTCCGCCAGCGTTGCCTCGTCGTTCG 699583 37 100.0 35 ..................................... AGGAGGCAGGCGAGGTACTTGAAACCGTCACCCGC 699655 37 100.0 37 ..................................... CGCGGCGCGCCCCTACTGCCCCGCCATACGTCTCGTT 699729 37 100.0 37 ..................................... TCGGCATTATGCTGAGTGTTGCGCCGGCGGCGCTGAT 699803 37 100.0 35 ..................................... CGGGGCGCTTGCGCTCGCGTGGCGGTCAGGAGTGT 699875 37 100.0 35 ..................................... GCCCCGTGCAAGTCACGCACGTATTGGACAACCGG 699947 37 100.0 37 ..................................... GCGTAGTATCATGGAGTAGAAGAGTATGCAGATTAAG 700021 37 100.0 37 ..................................... AAGGCCCCGGGACAGAAAACGGGGTCGCCGTAATGGT 700095 37 100.0 36 ..................................... GGCGCAACTGGCTTCGGTCGCTCCTGGCCATTGTCC 700168 37 100.0 37 ..................................... CAGTAGCGGAAGGCAAGATAGAACGCCAGCAGCGCAC 700242 37 100.0 36 ..................................... GTTTGATACGATGTTGGCCGAAACGTTGCTGCGGGC 700315 37 100.0 36 ..................................... ACGTCGTGGAAGAAGCAGCACAAGCGGATCAGTTCG 700388 37 100.0 36 ..................................... GAGTCGCGCGCGCTGCCGGAACCGTCGCCGCTGGAC 700461 37 100.0 35 ..................................... TGCTTTATGTTTCGTGAAGTATTCGGTCGCATGTT 700533 37 100.0 36 ..................................... GGCGCAATCTTCTTGATCCCCTTCACCCCCTAACCC 700606 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================================================================================================================================================================== ================== 164 37 99.4 40 GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG # Left flank : ACCCCAGTCATCGTCAGAATGACAACCCACGGATTGAGGAGATGTGTCAATGCTCCGATGGTGCCGGCAAGTGGAGAGTGAACATACTTCCCGGCGAGGTATATTGGCCAAGCTGTTACGCTACTCACCAGCGCAACCAGGGTAAGCGCCAGGTGTACGCCGAGATCAATGTCACTACCGGCATACTGAAAGATGGGCACAAGCAGTAATGCATAGAGCGGGTGAAAGCCATTGGTCAGATTCACACCATCGAACGTAGCGCCCACACCTGAACCGAGGTGTTGTGCCAGTTTGAAGTAGTAATAAGCATCGTCGGCGTTTGCACGCCACGAAAGTTCATCTGTTGGCTGCCAGGCGATCCATAGGCGTATGGCGAGACCAACAAGAATACCGACGATGATCAATTGCGTGTCGAGTGGTCCTCTCAATTTGCTTGTGTTCATAGATGGAATATACAAGTGTTATTGCGGTGCATTGCGCTGCTACGCGCTGAAGCACTG # Right flank : GGCCACCACTCTTCCTGTGCTCCTACCGCTGTGATACCCTCCCACTGCCAATACAACCGCTCATAGGCCTTCCTGTGCTCTTAGTATAATCACTTTTTGGAAGAGTGCAAACGTACCAAACGGGTTGTACTCGCAACTTTTCTTTTGTCCGTAAAAGGCATTGAGTTGAGATAACACTTCATCCCTTTGTAATGCGCTATATCGCTGATAAGGTATCATTTGGCTTTGTACCGGAGAGGGGAACTAGACCACTCCGGTACAGAGTTGCGAATGAACCGCGTTAACGACCTGTTCGATCGCTATGCTCACACAACATCGTTACAGAAGCGACGAAATTCACAATTAACGCACATCGCCCGGCTCGTCGGCGGTGGTGGCAGTGCTTCAGTCTTGATGGCACGTTGAACCGCTGCGATGGTGTCAAGAACATTGCGACGTAATTGTGGACTGATCGGAACTTTCTCCGCTTTACGTAGCGGAATATGATAGATCCAGCCAGT # Questionable array : NO Score: 8.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.33, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTGCTCTACCGTGAGCCGAAAGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : NA // Array 2 3343136-3342947 **** Predicted by CRISPRDetect 2.4 *** >NC_011831.1 Chloroflexus aggregans DSM 9485, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ====================================== ================== 3343135 38 100.0 37 ...................................... CAATAATGCTTCCTCCCGTGGTTCACCAACGACGGCC 3343060 38 100.0 38 ...................................... GCAATTTGCGCGTGCGATCTTGGAGAGAAAATTTGCGA 3342984 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ====================================== ================== 3 38 100.0 38 CAACAAAAAACCTCTGCGTGCTCTGCGTCCTTCGCGCC # Left flank : CAGTGTACCGCTCTCGGCAATCACCAACTCTGCTCCCGACAAACAGACGGGGATCGGTTCTAGCTCTTGGAAACGGTTCTTGCGCCCTTCACCACGTACATCAGCCACCGCCAGCTTCACGCCACGTGCGGTCAACAATTCAGGCAAGCCGGGTAGACCTATCTGGTCGAGATCCCAGCCGATTACACTCGTCGCCTGCGTCTCTTCGATCAAGCGGTCAACAATCGCTAACGCCGCATCAGCACTCCCTACCCGATATGCCTTCCCCTCAAGCCTGGTTAGTTCATCGATAAACTGACCAACAAGATCATCTTGGGCCGGCAACACAAACGGTGGTGGTTCGTGCGGCATTCGTTCAGCTTCAGCCAACAGCCAAGGCCGGTTGGCGTTGAGACTGGTGCGGAGATTGGCGAGAATCTGTTCACGACTCATAACATCTCCTAATCAAAACACAAGCTTCGCAGAGCGATAAAGGTCTGGCAAAAGCTTCCTACTGAGAA # Right flank : CTTGCGTTTATCATCCTCTGCGCCTTTGCGCCCTTTGCGCCTTTGCGTTACCCGCCTCGCCCCCTCTGCGCCTTTGCGTCAGCGTCCTTTGCGCCTCTTCTTACAGTCGCCGTTCGTAGAATAACGACAACGGATCATTGGGATACTCGCCGAACGGGCCGATCTGGTAAAAACCGGCCTTTTCATAGCAGCGGATAGCCGCATGCTGCAACGTACCGGTTTCGAGCCGAAGCAACCGACATCCGCGCGCCAGCGCATACGCGGCGAGGTGATCGATCAGCCGTTGGGCCAGCCCCATCCCGCGAAACGCTGGCCGCACATACATCCGCTTCAGTTCGCCATAGTTAGGGTACAGTTGGATACCACCGCAACCGGCAGCCTCGCCGTTCACCCGCACGACGAAAAAGGCGACTCCTTGCGCAATAAGCTTCTCGACGCTATAGCCATGCTGGCTTTCCGGCGGGTAGAGCGGGGCCAGTTCGGCTTCCAGTTCTTCGATC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAACAAAAAACCTCTGCGTGCTCTGCGTCCTTCGCGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 3 4194733-4201804 **** Predicted by CRISPRDetect 2.4 *** >NC_011831.1 Chloroflexus aggregans DSM 9485, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 4194733 36 100.0 44 .................................... CTGATACCGTACGATATACGGTGTACAAGATAATGTACAAGATC 4194813 36 100.0 41 .................................... CCCAGATACCGGGGGCACTGTTGACCTCGAACACAAGTACC 4194890 36 100.0 42 .................................... CCGCGGTAGCCGTCCATTGCAAAAATGCCGTAGTGCGTCTTT 4194968 36 100.0 42 .................................... CTCTAGAACTCCACCAGAGCTTGCTCCGCCATGCGGATAAGC 4195046 36 100.0 41 .................................... CTGTACAGTATGTACACTGTACGTACACCAACAAATACTTG 4195123 36 100.0 43 .................................... CGAAAGAGCTACGGAACAAGCTATACTCCTTTGATATTGGTGA 4195202 36 100.0 39 .................................... CCCAGACTGGAAGCTGCCATCCCAAAAGCGGCAACGTTT 4195277 36 100.0 37 .................................... CCAATATCAAACGAGACACTGCCGACCTCCTCGTTAT 4195350 36 100.0 41 .................................... CCGGTTTGTACGCGACCACTCATCGAGTACTCGTTGGATAC 4195427 36 100.0 42 .................................... CATGGGAGGATCGATCGCAGTCTTACTAAAACGACCCCATCC 4195505 36 100.0 40 .................................... CTTAAAGAAGCCGTTCTGCAGGGTACCGACCTCTATAAAG 4195581 36 100.0 40 .................................... CGGCAGGAACGCCGTTTACGACCGTGTACACCGACACTTC 4195657 36 100.0 42 .................................... CCGGTATGATCCGGCAACGAATGTATCCGTTACTGGATCGTC 4195735 36 100.0 42 .................................... CCGGTATTATCCATACCGTTGACAAACAGGGCATATGCCTGC 4195813 36 100.0 39 .................................... CTGGAGATGGCCGCACCATACAAGTGCGGCCATCTCCAG 4195888 36 100.0 39 .................................... CTCATATGTCCCTGCTTGCAACAAACTGCCTGACTCCGA 4195963 36 100.0 43 .................................... CCTGAGAGCCAGCCCTGACGTCCTTTCTCCCTCAGTGAGGCAA 4196042 36 100.0 41 .................................... CCACCATTCCGTCTCGCCCCCGCAACCGACGGAGCATCCCA 4196119 36 100.0 42 .................................... CCGACGGTTATGTCGTGGATATTAAAACGGGAAAGCGAGTAG 4196197 36 100.0 44 .................................... CGTAGCGCAAACGGTGGTTGGATGGGCTGCACCCATACGTCGAG 4196277 36 100.0 38 .................................... CTTGTGCTGGAGCGCGAGTTGGAGCAAATGTACATTCC 4196351 36 100.0 46 .................................... CTGATGATGTCGTCGAAGTAATCGAGTTATAAAAAAAGAAGGAGGA 4196433 36 100.0 42 .................................... CTCGTTTGTTAGCGATACCGTTGTCGACCAAGCAGACCAACT 4196511 36 100.0 43 .................................... CCGATGGTCAAGGCTCTATGTAAGGAAGTCCCTAGCGCCTTAC 4196590 36 100.0 40 .................................... CGTACCGCGATGCGTGGTGGTGGTTATTGCTGCTTTTTGC 4196666 36 100.0 44 .................................... CGCTATCATTCTTTGGAGATCACCGGCGAGCAACTCCTGCTTTT 4196746 36 100.0 41 .................................... GGTATTTGTAATTGTTTTCGCTAAGCCGGAAATTGATTTAC 4196823 36 100.0 39 .................................... GTTGACGAGGGCTGCACGGCTGGAAGCCGGAGTCTCTCC 4196898 36 100.0 40 .................................... GCGGTTGAGGAAGTACCTCCTCATACTGTGCTCGCGTTCC 4196974 36 100.0 41 .................................... GACAGAATACCGACACACCGGTTCGACCGCTGGTGAAACCG 4197051 36 100.0 42 .................................... GCGATCAGATAACAGTGTTCGGAGAGCCGGATTACCTTTGCC 4197129 36 100.0 44 .................................... GTCGAAAACAGAGACCGCGTTGCTAAACGCGGTCAAGGCACTCA 4197209 36 100.0 43 .................................... GAGGCGAGAGACATCGAGGTGAGGGGAACGAGTATCTGTATAC 4197288 36 100.0 42 .................................... GTCATCATCAACCGCATTGCTGATTCGGATCATTGTTTGCAT 4197366 36 100.0 38 .................................... GACACACATCGCCCTTTTATACCCGCCGACACTCATTC 4197440 36 100.0 42 .................................... GTTGAACACCGTCCGGTTGTTGGCGGTAGCCGTCACCGTGTC 4197518 36 100.0 40 .................................... GACTCTTCGGTTGTCAGATATGACCACGGCGGCATCATAC 4197594 36 100.0 44 .................................... GCAACGTCTCTGCCACGCAGTGCGGAGATACGTCGATGTTAACA 4197674 36 100.0 40 .................................... GCGCCTGCACACTAAACCCGACACCACATCCCAACATGAG 4197750 36 100.0 40 .................................... GCCTTGTCAGCCGTCCATGGGTGGCTGGCCGTGGTGAGCC 4197826 36 100.0 39 .................................... CATATTATCCCACTCAAGGTCAAGCAACGCCTTGTTCCA 4197901 36 100.0 39 .................................... CGATCAGATGAATCAACTTAAGATACTGGTGTATGCTCC 4197976 36 100.0 42 .................................... CGAACAAAGTCACGATTGCAGCAGACCAGAAACCTGCTGCAA 4198054 36 100.0 38 .................................... CACATGCTGCTGCTCAACCGCGCAGCGGAGTATGCTGC 4198128 36 100.0 40 .................................... CACACCGGCACAGCGGGTCGCACAGAACCGTCATGGGTAC 4198204 36 100.0 43 .................................... GCTTCATTGCTACTGGCCACGACGTGGACGGCCTTGTCAGCCG 4198283 36 100.0 39 .................................... GGTGTTACTGATCATGATTGCCGTTTGCATCGTTTTTTC 4198358 36 100.0 42 .................................... GCGGCAGGACGTACCGGCAGAACGTACCGACAATACAAGAAC 4198436 36 100.0 41 .................................... GTTCAACGGTGCTCGTTCTGCCCACCGTATTGCCCCTTTCG 4198513 36 100.0 43 .................................... GGGAAGTACTCGGCGCGCGCCTCCATGATGGCTTCCAACGGGT 4198592 36 100.0 42 .................................... GTGCAGACGCACGTCGGTGGTTGGTACGGCTTACCGTTTCTG 4198670 36 100.0 44 .................................... GTACTGCACTATCCTATGCTCCTCGTGTAGACGAGAAGCACAGG 4198750 36 100.0 41 .................................... GAACACCGGTGAAAAAACCCGCATGTGCGCGGTATACGTTG 4198827 36 100.0 39 .................................... CAATAACTTGATGAGCGTCTGGCGACGCTCATCATTGCG 4198902 36 100.0 43 .................................... CTGACTAATGCTGTCACGCTCGTTATCGATCACGCCGCTGTGC 4198981 36 100.0 39 .................................... CGAAAAATTATTGTTATCGTCGCATCCATATTATTATCG 4199056 36 100.0 39 .................................... GTTAGTTGAGAGATTGGCTGCCCCGGAAGGGCGTAGTCG 4199131 36 100.0 43 .................................... CCCAATAAAAAAACGGTATTTACTGCTTCCATACCGGTATCCT 4199210 36 100.0 41 .................................... CTTATTGCCAGCCGGTCAAATTCGGCAAGCACATCTTCAAT 4199287 36 100.0 41 .................................... CCCGTACTTCACGGGGCGACCGACCACAAGGTCGGTTTTTG 4199364 36 100.0 45 .................................... CCGGCTTCTTTGTAATCGACCGATACCGATCCATCACAACATGAA 4199445 36 100.0 42 .................................... CACGACACAATGTCGACGCATCCCCCACCATTACCCCGCGTG 4199523 36 100.0 41 .................................... CGTACGTTATCGCGTGGTTGACGGTAGGACTGTTGGTGTAC 4199600 36 100.0 41 .................................... CGTTTGAATAAGGGGCATCTGTAAAAAGTCCCCCAGCGCCG 4199677 36 100.0 39 .................................... CGAGGCATGGCAGATACTCGATAGACGGACGTTTATGAC 4199752 36 100.0 41 .................................... CTGAAAACAATTGACTTGACAAGTAATTTGACAAAAAAGAC 4199829 36 100.0 45 .................................... CCTGATCCGTTACCAGTGTCCAACCGTTGACACTGGTATTTGTCA 4199910 36 100.0 44 .................................... CACCGCGATGGCGGCACTCATCGCGGTTACGATCGGTTTTTACT 4199990 36 100.0 47 .................................... CTTATTACGGAACAAACCATGCGTCGAAAAACCGATGTCCTGTAGAC 4200073 36 100.0 43 .................................... CCCCGGTCTGGGTACGCTAAGACCACAAACATTGAGACATTAT 4200152 36 100.0 41 .................................... CTTTATTTCTTATAGTCCTTTAGCGTCTCCCTCCAGTTTGG 4200229 36 100.0 40 .................................... GATCATAAATTGTTGTAGCGACCGGAAATATCCGGTCTAA 4200305 36 100.0 40 .................................... CCCGAACGTATGTTGTTGCAAGCACCTCGCTTGCCTTTGT 4200381 36 100.0 42 .................................... CTGTATACGCTATCGTTGCGGGTGTACCGATCACGCCTTTCG 4200459 36 100.0 40 .................................... CGCAAACACCCGCATATTCGCGGTATACGTTGTCATATCG 4200535 36 100.0 41 .................................... CTATCATGTCTCGTAATAAAAGTGATACCTGCCACCTCAAA 4200612 36 100.0 43 .................................... CGCTGCGTAATTATGTTGAAGTACTCGGCGCAAGCGGTATCCG 4200691 36 100.0 40 .................................... CCCCTGCGTTTTTTGTCACTATGTATACATCGGAGTCGGT 4200767 36 100.0 40 .................................... CGACTCATCAACACATAAAGATCGGGGTCTGGTGAGCGGG 4200843 36 100.0 41 .................................... CGCATCTTTGAGCGCCTTGACGGCGCCCAAAAGTGCCTTTT 4200920 36 100.0 42 .................................... CTTCCTATTCTTATCGGGTTCTACGACTTTGACCGTTTCTCC 4200998 36 100.0 45 .................................... CAAGAAGGCACTGGATACATTTTTACTCCAGCCGGTTAAGTTTGG 4201079 36 100.0 43 .................................... CCTTCTCGGTGCTCCGGTAGAGTACTTGTTACCAATGCCTCGG 4201158 36 100.0 36 .................................... CCTTTCTCATCGCTGGCCACAACGTGGACGGCTTTA 4201230 36 100.0 43 .................................... CAGATATGGCATTCGCCGTCTTGTATTGGTAACATACTTAGCC 4201309 36 100.0 40 .................................... CGGACGTTCTCCAAACGCGCATGAGACACAACCCATCAAC 4201385 36 100.0 39 .................................... CCTTGCACAATCGACTGCTCCAATGTGGCGTCTGGGTAC 4201460 36 100.0 40 .................................... CTAAGCTTTCGTTGACGTTGGAATATCGGTATAAGATAAC 4201536 36 100.0 43 .................................... CCTGCCGTCTCCGGCTCCTGCGCCGCTGCCTGTGCTAAGGCAC 4201615 36 100.0 40 .................................... ATGCCGATATTGTTGCCTCCTATACACCTGGGTCGTTTGT 4201691 36 100.0 42 .................................... CCAAACGGCAGGAACACCGTTTGCAATTGTTTGTACCGTTGC 4201769 36 77.8 0 .........................TTAAT...TCG | ========== ====== ====== ====== ==================================== =============================================== ================== 92 36 99.8 41 CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA # Left flank : AGCGCGGGTGGTGCGTCAACGCACCGACGACTACGAGCCATTTGCCGTTCGATAATAAAGGAGCGGTTCCATGCTCTACCTTATCAGCTACGATATCAGTGTTGATCGGCGTCGGCTCAAGCTAGCCAAACTCCTCGAAGGGTACGGCCAGCGGGTCTTAGAGAGTGTCTTTGAATGCGATCTGGAGGCAAGTGCCTACCGACAGCTCAAACAGAAACTCAGCCGTCTCATCAACGTCGCCGAAGGCGACCGGCTACGCATCTACCAACTCTGCGGCATATGCCGACACAACGTCGAGATCATCGGCGAAGGACCACCGCTCGAAACGAGTCACGACGTCTACATCTTCTAAGTGGCGCGCAATCGCACCAGAAAAGGAAAAACCTCAACAAAAATCGGCAACAACCGTGCAAAACGCTTAACAATTATTGCGGCACAGCCGGTCACCGCGCAAAACGGGTTATGGAGGGCCTTGCAAAGCGGTAGACGATGTGGTACCC # Right flank : GGAACACGGCATGCCGTGTCCCGACAACCCAATGTGCCGTCTCCCGACGTGCCGTGCTGCCCACCACCACGACCCTCGTGACGTTGTACGGGCGACCTGGTGGGGGCAGGCCCCACCGATTGCACCGGTCACCCAATCGTCGGGGCAACCCGGTGGGTCGCCCCTACCTAATCCCCACACGTCGGAACACGGCATGCTGTGTCCTGACAACCCAACGTGCCGTCTCCCGACGTGCCGTGCTGCCCACCACCACGACCCTCGTGACGTTGTACGGGCGACCTGGTGGGGTAGGCTCTGACGATCGCACCAGCCCCTACCTGATCCCCACACGTCGGGGCACGGCATGCTGTGTCCCGACCACCCAACGTGCCGTCTTCCGCCGGGCCGTGTCTGATGATCGCACCCGTCACCTACCCGGTACGGGCGACCCGTCGGGTCGCCCCACCCTGATCCCCACACGTCGGGGCACGGCATGCTGTGTCCTGACCACCCAATGTGCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAAAACACCAAAATCCCCGTGAGGGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //