Array 1 45307-45518 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZGE01000002.1 Limosilactobacillus oris DSM 4864 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 45307 29 100.0 32 ............................. TATTGAAGTCATGCGACGGCACGTTTGAGGAG 45368 29 96.6 32 ............................T AAAAAAGAATGGAGATGAAGAGTCTCCTCTTC 45429 29 100.0 32 ............................. AGGGGATGCTTAAAGGCACGACGCCACGGGTC 45490 29 89.7 0 ..........................TTT | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 GTATTCCCCATATACGTGGGGGTGATCCC # Left flank : TGATGAATGGGCCTTTGACCACTTTAAGAACAGCCTCGGTGCTACCATTGTTGAATAGAAGTGAGAAATAGTAAAAGCATTCTAGCTCGAGATATGAAAATCCGGCCATTGATTTTTGGAATTCCAGAAATCAATGGCCGGATTTGTCTTATATTAATTAAAAATAATCCCTGGCCAAAATAGCTGAGTGCCGGATAGCTTAAATGTGTTTTGACAGTACCTTACATTGTAGGGAAATGCTGGAATATTCCTCGCAATAGTGTTCCGAGAATGGGAAGGATGAGGGTATAACGGTGCTTGAACGTAAAACAGCTATTAAAGTAGCACCATTTCTGGACTGCAATAGCATATATTGATTTAAATATTTCTCATAGTTAATTAAAATGGGCGAAATAAAACTTCATAGAAATTAGTTAGGGGGAGGTATATCAGATTAGCAAACTAAATAGAAATTGAGGTATACTTGGAGCAAAAGCTTGATTTGCTGGTAATCTTTTAGT # Right flank : TTATGCGGTATTCCGTGCCCTATTTTTCTTCTGTATTCCTCATGTGAGTGTGGGCTTCCGTACTTGCCACTTTCTTTCCGGCATTATGTCCTATTCTCAGTGTGTGTGTTATGCCAGGAAGCATTCCAACGGTGCTTCCTTTTTAAGTGCGGAGGAAAATAATCATGAGTAAGGAATATTATTGTCAAGGCGATGTGTTGTACTTTGATTTTGGTACCCTGGAGGGAAATGAAATCGGGGGTATTCGGCCAGCAGTAGTATTATCTACGAATACCTACAATAAGCACACACATTCATTAATTGTGCTGCCAGTTACTACTCGGGGCACTAATTTTAACTGTTATGTACCTTTGTACGGGTATAAGAATGTTCATGGACGAGTTAATACAGCACAGATCTACAGTTTTTCGACAGATCGAGCGAGGTCAATGGCAATTGATCATTTAACATTCGAGGACTTTCGACGTGTCCGTTTAAGAACAATGGAGAATATTTTGTAA # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATATACGTGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.60,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 57423-58401 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZGE01000002.1 Limosilactobacillus oris DSM 4864 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================================================== ================== 57423 29 100.0 32 ............................. TCGGTGAACCTGTAAATGCAGGGTGTACGTTT 57484 29 100.0 32 ............................. TGTCATGGTGCCCAAGAAAGATGGTACAGAAA 57545 29 100.0 32 ............................. TGACATGGTTAGTCCTCCCTTAAATACTTGTG 57606 29 96.6 32 ............................T CACCTTTATCGAATTTCATATTCCCCTCTTTT 57667 29 100.0 33 ............................. TTTTAGGCGCCTTAGGGCGTCCTGAACTTTATA 57729 29 100.0 32 ............................. CAGTTCGTGAACGAGTGTTTGCTTAACGTGCT 57790 29 96.6 32 ............................T AGTGCCGCAGCCAATTGGGTTAGGCCGAATCA 57851 29 96.6 32 ............................G AATTCGACGGTTACAAGGACCACATGGATGTT 57912 29 96.6 32 ............................T AACCCCCTTTCGTTTAAGCACAGTTTCTACTG 57973 29 96.6 32 ............................T GTATTTTCTACGCCTGACAGGGATGGTCGATA 58034 29 100.0 32 ............................. ATTTAGCTCATACCAAGGACTTACTAGCAGAA 58095 29 96.6 32 ..............T.............. ATTTTAGAAAGCGCTGGACCGGCCTTTCCACC 58156 29 93.1 32 ..............AA............. GGACAAACTACTTGGCGGGACGATCGGCGGCC 58217 28 89.7 67 ..............T.....T.-...... ATATACGTAGGGCTAAGCTATCGCATTTCTCGTACGGTATGTTGTATAATACAACCATTAACTTTTG 58312 29 86.2 32 .............GTA............T GAAACGATATTCAATGAGATGGATATCCAAGC 58373 29 69.0 0 ...........ACTT.......CA..TTA | ========== ====== ====== ====== ============================= =================================================================== ================== 16 29 94.8 34 GTATTCCCCATGTACGTGGGGGTGATCCC # Left flank : TCTGCGCAGATTATTTCAATTGGAGCGGTGAAACGAGTAGCTGGGCACACGACAACTTTTTATCGGTTAGTAAAGCTGGAATCGGGCAAGAAAGTGCCGGTGGATATTGCCCGCATGACTGGATTAAATAATGAGCGTTTAGCTGCGGAAGGCGTGTTAGTTAAGGAAGCATTGATAGACTTGCAGGCCTTTACGAAGGGCCTGCCAATTGTTGGTTATAACTTACTTTTTGATGAACGCTTTTTGCAAACTGCAGTTATTAGAACGGGCATTGTTCAGTTTAATAATAAGATGGTAGATGTGTTGCCATATGTTAAGACGACTGATAAGTTTTGCGATAATTATCATTTAACAACTGTCCTAGCCAAGTATGGCGTTAAAAATGAGCAACCACACAATTCATTAGCGGATGCAACAGCGACTATGGAGCTAGTTGATAAACTCATTAAAATTTACGGCTTTCGAATATAAAAACCGCGGCCCATCAGGGATCTTTTAGT # Right flank : ACTATTAGTACTTTCTTTGATAGTATTCAGTTGCGTTGATATATCAAGGAGTACGTATTTCCTTAATTTGCGCCACTATTGCAGTGCCAGAAAAAGGCGTTGTAGTAGTGGCTTTGCTATTTTTTAAAGAGCAGCCCCATATTTACATTAAGGATTATCAGCAATTTTTCTTGAATAAGGGATAATAATCCTGTATTTATATTAGAGAGCCCCACTGTTTTAAATAGGAATTAGAAGACCAGGAGGTGACCTTTTTGAGAGAATACAAAAATAAGGAAGAACTCAAAAGTGAAATTAATAAGTCATTCGGAAAATATATTTCTGAATTTGAAAACATTCCAGAAGCTATGAAGGATAAACGGGTCACCGAAGTTGATAGAACGCCAGCAGAAAATCTTGCTTATCAAGTGGGGTGGACGACCCTCGTCCTCAAATGGGAAGAAGACGAACGGATGGGTCTCCAGGTTAAAACACCATCAGATAAATTCAAATGGAATCAA # Questionable array : NO Score: 5.44 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:-0.13, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTACGTGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //