Array 1 320100-320847 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR782267.1 Acinetobacter sp. Marseille-Q1620 chromosome contig00001 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 320100 28 100.0 32 ............................ TACAAATACAAATGCTGGTGTTGTTTCTAGTC 320160 28 100.0 32 ............................ TGTATCTGATAAGTCTGGTGAAACCATCGGGA 320220 28 100.0 32 ............................ AAGCCGACACGCATCGAGTGGATTTGCTAACT 320280 28 100.0 32 ............................ TGATGGGTATCAAAAGTTTCTCAACGTCGAGT 320340 28 100.0 32 ............................ TATAGTTTAACAGTTCCAGCTTCGGAAATATC 320400 28 100.0 32 ............................ TATAGTCAAGGGTAAGCAACATCCTGCTAGAA 320460 28 100.0 32 ............................ TAACGTAGCATTATCTCCAAGTGGTATTGATG 320520 28 100.0 32 ............................ ACCAAGTCCCCTCAAATTCATCATCTTTATTC 320580 28 100.0 32 ............................ ATGCAGACCAACCACGATTACACGACATAAGT 320640 28 100.0 32 ............................ TCTTGTATCAATATCAGCACCACAGAAAGGGC 320700 28 96.4 32 ...........T................ AATCCAGTTGCAAAATATTTAGTCTTGTTCGA 320760 28 96.4 32 ...........T................ TGCAATGGATATTGTGCTTGAGATTTATTCAG 320820 27 75.0 0 .........T.TA...-..A....T..A | T [320844] ========== ====== ====== ====== ============================ ================================ ================== 13 28 97.5 32 GTTCACCATCGAGTAGATGGTTTAGAAG # Left flank : AGTCAGTTTATCGGGGTTTTTAGTCCTTATAGCATGTATTAATTTACTGATGGACGAGCGGAAAAGGGAAGTTGCCTTACTTCGTTCGTTTGGTAGTTCCAAAGCCAAACTTAAAAATATGATGAGTATGGAGATCGGTTTTATCGGATTGATGGCAGGAATCGTGTCTTGTTTCTTTGCTGAAGTGATCAGTGCGATTGCAAGTTATAAGATGGAGTTGATTATTCAAGTACATTGGGAGATTTGGATTATTTTACCAGTCGTTATGACGGTGTTATGTATGCTCATCGGACGTTACCGTTTGAGTTATTTAAGTGAGATTCCACCTTTACAGAGTTTAAGGGAAATCAATCAGTGATTCCTGGATTTAGCTTCGATTTTATATTGTGAGAAAGTTATTTTTAAATCAATCAATTAGGATGTTCGTTGGAAATAAAGTGTTAATGATAAAAAATATGCTATCTTATTTATATCACTAGGGTTTTGTTTTTTAAACTCTA # Right flank : ATGAGATCTAAATCATCCAGAAATAGATCTCATAGGTTTTCTACATTCCCAACTGATCTTTCATTTGTACCCAAATTTCTTGCCAAACTGGAGCAATAGGTTGCACAAGTTTCATTAAATATAAATAGATGAAATATGTTGCGATGATAGCAGCAATCAAAATAATGATTCTTGAGAGCATGCCCATTTTTTTCCGTTCAACATAATACCACGCGATAGCCAAAACAGCTCCCATGATCATTCCACCGACATGTGCTGCATTATTAATGCCAGAAGCTAGCATTCCGAAAGCCAAATTGATCACCATAATGGTGATCAATGATTTTTTATCGAGTAATAAACGCTGATGGGGCAAAGGTGAGAAAAAAGACAATGCTGTTAATGCACCACCAATTCCCATAACTGCACCTGATGCACCTGCACCAACTTTGGGTAAAAGATCGGGACTAAAGTTTTGAAGGAGTTCATAACTATGCTGAATATCGATATAGCCACTGAGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCATCGAGTAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACCATCGTGTAGATGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1052243-1052990 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR782267.1 Acinetobacter sp. Marseille-Q1620 chromosome contig00001 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1052243 28 100.0 32 ............................ AAAATGTAACCAGTTTGTTAGATTGGGTGAAC 1052303 28 100.0 32 ............................ TTGTAGCCAAAAAATTAAATCCTATTCACCTC 1052363 28 100.0 32 ............................ ATGCACACTTGTACGTTCCGTATATCCTGTTA 1052423 28 100.0 32 ............................ CTAATTAAAGGGCTTCTATATCTTTGTTATCT 1052483 28 100.0 32 ............................ TATAACAACCCAAATGTGCGCAGATTTTTGGA 1052543 28 100.0 32 ............................ ATACAAGTGCGTCAGCGATCTTTTTCGCGTAC 1052603 28 100.0 32 ............................ GGAAGTTGTGGTTCAGAGCGCGGAAGTTGTTT 1052663 28 96.4 32 .......G.................... CAAATACAAATCCAATCATTCTTGATGCTTCA 1052723 28 100.0 32 ............................ CGTATAAAGTACCGTTAAATATGTGAGAGATA 1052783 28 100.0 32 ............................ AGGTATTGCAATATGAGTTTGTTCAGATAGCT 1052843 28 100.0 32 ............................ TGAATGTGTTGAATGGTTTTCAAATTTATCGA 1052903 28 100.0 32 ............................ TGGTGGAAAAGAAAAGGGCGTTAATGTCATTC 1052963 28 92.9 0 ........................A..A | ========== ====== ====== ====== ============================ ================================ ================== 13 28 99.2 32 GTTTGCCATCGTATAGATGGTTTAGAAG # Left flank : TCATTAGATCGCTGGGATGAATATACTGAAGCCAAAAATCAAATGTTTTTCCATACCCATACTGCTGATGCACCCTGGACGATTATTAAATCGGATGATAAAAAACGTGCCCGTTTAAATTGTATCCGCTATTTTTTACAGCAGCTAGATTATCCTAATAAAGATTTGAATATGCATACTAAGGTTGACTCATTGATTGTGAATGTACCAAACCACTTGTTTAAGAGTGGGTACGATATGAAAGAAGATTGATCCTTTCCAATAAAAGCCCGTATGGGCTTTTATTTTTGAAATGAGTTTCTTTTTGATAAAAATCAGGAAACAATTTATTGATTAAACCAAAGAGTTTTAATGATTGATTTGGAGCTAACCTTGATTTTTAGGTTTTAAAAAATTATTTTATAAATCAAATTTTTATGTTTATAGGCTGTGTTGAAGTAAAAGTATACAAAGCTGTGTTATGTTGTTGATGTTGATGCATTCTTCGTTTTATTATTCTA # Right flank : AATCCCCTGAATTCAGAGGATTTAAGTCTAGAAAAATTAATTTATTCTGTTAAAGAAATTTTTTCTTCTTCATCCTCATCATCTGTAGAATCCATACCTAATTCTTTCAGTTTGCGTGTCAGAGTGTTACGCCCCCAACCGAGTAACTCGGCTGCATGGCGTTTTCTGCCACGTGTTTGCTGTAATGCTGCATTGATTAAAGTACGTTCAAACATTGGGGTGGCTATGTCCAAAATCTTCATTTCACCATTTTTTAGTTTTTGAATTGCCCATTGACCTAATAATTCATCCCAATGATGTAGTGATATACGGTCAAATCCATTTGTAGTTTGATTGTTTTCAGTGCTTTGACTAAGCGGAATCTGTTTAAGTTCAGATGGTAAGTCTTCTGGATAGACTTCACGACCCGTAATCATGACTGTAAGCCAGCGACAAGTATTTTCAAGTTGACGTACATTGCCTGGCCACGGTAACTTTTGCATGTATTCTTGAGTTTCTGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCATCGTATAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2124694-2125381 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR782267.1 Acinetobacter sp. Marseille-Q1620 chromosome contig00001 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2124694 28 100.0 32 ............................ ATCATAAAGTTGTTTAAGAATGGTCGAATCTA 2124754 28 100.0 32 ............................ ACCAACAATCATCACGCTCAAAGTCATCAAGA 2124814 28 100.0 32 ............................ ACAAGTGTTTTAAGTTGCGGAGTGAAGTCAAT 2124874 28 100.0 32 ............................ GAAGTAAATAAACAGACTTGAATGGTCTTCAT 2124934 28 100.0 32 ............................ GCCCTGTAATTGTACTCAGTAATAATGATGGT 2124994 28 100.0 32 ............................ ATAAAGAATTGGAACTGGATTGCCTTGTGCAA 2125054 28 100.0 32 ............................ GATCAAAGCCATGCCCACGGCAGAAGTTGTGC 2125114 28 100.0 32 ............................ ACACTCGGCGGGAACGCTTAGGAACAGCGGCA 2125174 28 100.0 32 ............................ AGTCACCGCCGCAAGCTATAGCAACATTCAGT 2125234 28 100.0 32 ............................ AACATCAGAACCCGAGCCGACATTACCAATCC 2125294 28 100.0 32 ............................ CTGAGAATATGACCACAGTTGAACTTTTGATG 2125354 28 85.7 0 ........................AGCT | ========== ====== ====== ====== ============================ ================================ ================== 12 28 98.8 32 GTTCACCATCGCATAGATGGTTTAGAAG # Left flank : GGTCGTTGGGCTAAGGCATTATATCGCCAATTGGCTCAAGGGTTTGATTTTGAATTTAATCGAGAAGAAGGTAAATCTTCACATGATTCGATGGCTGATACAGCAAACAGTTATCTAGATCATGGCAACTATATCGCTTATGGATATGCTGCAGTGACTTTAAATGGTATGGGGATCAGTTTTGCTCTGCCAATTTTGCACGGTAAAACCAGACGTGGTGGACTGGTATTTGATATTGCTGATTTGGTTAAAGATGCCTTTGTTATGCCCCAAGCATTTGCTTCTGCCAAGTTTGGTCATAATCAAAAAGAGTTTCGCATGCAGTTGATAGAAACCTGTCAAGATCAAGATGTACTAGACTATATGTTTAGCTTCATTTCTGATCTTTGTAATAAGATTAAATAATTCAAATATTTATAAAATACTTGTTTTTTGATGTATTTTCACTCTTTAATAGCTTAACAGTTTATTATCTGGAATATTTTTTATAAAATACTCCA # Right flank : TATTACACCATCAAAAATACCCCTCAATATTTAAATATTGAGGGGTATTAATCTAGGACTGCTTCCAGTGAAAAGAATATTTAGATCATTCATCAGCAAGAGAACATTCAAAATTACCAGGATTCTGCGCACAGCGAATTTTCTTTAAAATTTTCATCATTTCGGGGTTGTAGTAACCTTCTTTGGTCATTTGAATACGTGCTTCACGCATAATTCGGATATATCCGGGTTTATCTGCCTCGCGGATATCCATCCAATATTTTGCAGGAATTTGTTTTTCAAGCTTATCTACAAACTGAAATGCCGGTGACAATTGTTTGGAAATAATCTCACGAGCGACTGATCCCATACCCACAGGAAATTTCCCCCTGTGCATAATCAACACCCCTGTCAATTGTACAATTGGAAATCGAATGATTCCTCCGACAACATTTCCAGATTTGTCCTGCATACCCTTGTGTAGTTCCAATGGATCGAACAACAATGCAGGACCTGCCATA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCATCGCATAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 3721497-3720207 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR782267.1 Acinetobacter sp. Marseille-Q1620 chromosome contig00001 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3721496 28 100.0 32 ............................ ATTCGGATTTGAAGCAGGGTTTTCAATATAAT 3721436 28 100.0 32 ............................ ACCAAAACTGGCATTTATTCGGGCAACTGGCA 3721376 28 100.0 32 ............................ TCCTCGTTTTAACCCTGCATGATAGGACTTCA 3721316 28 100.0 32 ............................ AAGCCGACACGCATCGAGTGGATTTGCTAACT 3721256 28 100.0 32 ............................ TGTTTGTAAAACTTGAGCCGCTTGCAACTCAA 3721196 28 100.0 32 ............................ GGTCACGTCGCTTAACACGTTCGTCGCTACTA 3721136 28 100.0 32 ............................ GTTTACTTTTTCGGTACAGCCTACTGATGAAT 3721076 28 100.0 33 ............................ CAAGAGAGCTACAAGGTCGGAATCTTTCATTCA 3721015 28 100.0 32 ............................ TGGTCCTAGACGTACAGTTCTAGGGTTTAATA 3720955 28 100.0 32 ............................ CTCCGCGATCAAATCGAGTTTCCGCCTGATCA 3720895 28 100.0 32 ............................ ACATAAAATGACCTTTCCTTTGCAATGTTGCA 3720835 28 100.0 32 ............................ ACTACGTGATCAAATTGAATTTCCGCCTGATC 3720775 28 100.0 32 ............................ AACACAAACCGGCAAAGATAAGCACTGCCACA 3720715 28 100.0 32 ............................ CGAGCCATACTCTTTACCAGATATTGATATAA 3720655 28 100.0 32 ............................ ATCAAAATGATGTCCGGGTTCGCGTACCCGTC 3720595 28 100.0 32 ............................ AGTATGTGCCACCTTTTTTATCCATATATAAG 3720535 28 100.0 32 ............................ ATTACCAAAGTTTTTATAATGATGATAATGAC 3720475 28 100.0 32 ............................ AATACAGCAACCAGATCAGCAACCGTATTAAT 3720415 28 100.0 32 ............................ TGCATCCGTTTTTAAACTTTCTATTCCTGAAC 3720355 28 100.0 32 ............................ GAATTGATTCAGACGACACCACAGACATTCGT 3720295 28 100.0 32 ............................ TTATGGAACTGTAAATTTTGGAAACCATTTAC 3720235 28 89.3 0 ........C...............A..T | T [3720211] ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.5 32 GTTCACCATCGTGTAGATGGTTTAGAAG # Left flank : TCCTCGAGCTTTAGGCAGTCATATCTTTGATGCAGATATCCGAGAACTCAGTGAAGACGTCCGCTCGTTGGTAGAACATGACGCATTTTTATTCCAGAAAGTACGGTTCTTGCTTGATACTACATCAGGATTTATTAACACCGAACAAAATGACACGATCCGTCGATTCTCGATTTTACCAAGTATGCTGGCACCTCCTATGTTGATCGCCAGTATTTATGGAATGAACACTGAAATATTACCGTTTGCACACGGTCATTGGAGTTTTTATGTGGTTATCACTATTTTAATTGCTTTCTTTATCGGTCCACTCATTTACTTTAGATGGAAGAAATGGATTTAACTCTGATTTTAAAAACCAAGCATCAATGCTTGGTTTTTTCTTGAAAAATATTATCTTTATAATTCAATAAATTAAAACCAACACAAAAAATGATCATATTATGATCATTTCTATGCTATCTTATTGAAATCTGAAGTATCCATTTGAGTTTTTTCGA # Right flank : TTAATAGGGGAAAAAATAATGATACAACAAATTTTAGCTAATATACGAAATGATCTTAATCTCCTTGGAGACGAGACTGTCCGTAAAACATCTCAAAGATTTTTTAAAAAAGATCAAAAAGTGAACTTTTATGGCATAAAAAATGCCGATGTAAAAAAAATCATTAAGAAATATAAAAAACCAGTGCTAATCCTATCGAAAAAACAGATATTGGAACTGTGTGAATCTTTGCTAAAAACAAACTATATTGAAGAAGCTGGTATTGCATTTGCATTTACTGAGATGATTGGCGAGCAATTTGAACCATCAGATATTAACCTTTTTGAAAATTGGATTAATTTATATATAAACAATTGGGCTACTTGCGATACGTTATGTAACCATACGATTGGAAATTTTATCATCCAGTATCCTGAACTTATATCAGAACTCAAAAAGTGGACAAATTCATCAAACCGCTGGATGAAACGCGCTGCTGCTGTTTCCCTTATTATTCCAGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCATCGTGTAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACCATCGTGTAGATGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //