Array 1 93061-94708 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPK01000012.1 Acinetobacter kyonggiensis strain ANC 5109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 93061 28 100.0 32 ............................ ATCTGGATTAGGTTTACAAACTTGAGTTGGTG 93121 28 100.0 32 ............................ ATATTATTTCAAATTGCCAACTAACTTTTTGG 93181 28 100.0 32 ............................ CTTAACCTATCGCCCCGAATTTCGGGGCCTCT 93241 28 100.0 32 ............................ ATTCGACCATACTTTAGTGCATTGTTTAAATC 93301 28 100.0 32 ............................ ATCGCAGACGTAGAGAGTTGTTTATAGTTTCA 93361 28 100.0 32 ............................ AACATCTACGCAGCGAGGGAGTCGCGTGTATT 93421 28 100.0 32 ............................ AAAAAACTGCGTAGTCCCAATGCTCGGTATCA 93481 28 100.0 32 ............................ ATCAATGCCGCAAAAGCTTCGTTACCATTTAG 93541 28 100.0 32 ............................ ATTAGTGAGATCCGGTCTTATGTCCGAAAGGC 93601 28 100.0 32 ............................ AAGATTAAACAATACAACTAACTGTAAAGCGA 93661 28 100.0 32 ............................ ACTAAGCAATCCACCTTGAGCGGCTGCGCCAG 93721 28 100.0 32 ............................ AAAAGCTCTTCGGTTACAGAATAAGTGCGCTT 93781 28 100.0 32 ............................ ATCGCATTTATTCATGTCGATTGAATCAAATT 93841 28 100.0 32 ............................ ATCGCATTTATTCATGTCGATTGAATCAAATT 93901 28 100.0 32 ............................ AGTATCATGTTGATTCTGGACATACTGATATT 93961 28 100.0 32 ............................ CGAACTTTACTCTTAGCCAACTCAGATGCAAT 94021 28 100.0 32 ............................ AATCAAAAGGTATGGGGAAGTTACAGAAAGGT 94081 28 100.0 32 ............................ GTCTGCAATTTCACCGCGTGTTGTTGCCTGAG 94141 28 100.0 32 ............................ GTCTGCAATTTCACCGCGTGTTGTTGCCTGAG 94201 28 100.0 32 ............................ TTCCTCGTGGGCCTAACTTTGCCGCCGCGAGC 94261 28 100.0 32 ............................ AACAAGAAAAGAAAAACCCCGCCAAGTTAGTT 94321 28 100.0 32 ............................ TCTTGTTTATTTATGAAGTTGAATGTCCATCT 94381 28 100.0 32 ............................ ATTTGTAAACCTTCTCGCTTTCTTTGTAAAAC 94441 28 100.0 32 ............................ TCTCAATGGCTCTGGATAATCTCTTTCGCACC 94501 28 100.0 32 ............................ ATTACCCATGAAGCGCCTAAATCTTTAGCCCA 94561 28 100.0 32 ............................ TCATCATCAATAAACAACAACCTGATCTTAAA 94621 28 92.9 32 ...........T...............G TTTTTAAATTTGTATGCTTGGCTTGGGTTATC 94681 28 89.3 0 ...........TG...........A... | ========== ====== ====== ====== ============================ ================================ ================== 28 28 99.4 32 GTTCACTGCCAGATAGGCAGCTTAGAAA # Left flank : GCAGCTTTAGAAAACCTAAATATGTTTCAGTGGTTAGAGCGTTTAACTGATTACGTTCATATTACGTCTATACGTGAAGTACCTGAAAATATTAAGGGTTATGCAACATATAGCCGTAAGCAAGTGAAAACCAATGCTGAGCGTTTGGCGCGTCATCGTGTAAAGCGTGGCGATATTGGTTTTGATGAAGCATTGGCGCGATATAGCAATGTAGTTACCACTACAGATTTACCTTATATCCAAATGAAAAGTTTAACATCTGACAAAAGTTTTAAGCTTTTCATAGAAAAGAAAAATGCTAATCAATCTGAGACTCAGGTTTTTAGTACCTATGGTTTAAGTTCGGAATCATCAGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAGGTTATGACAGTGAGTAAAAACTTTGGTCTTTTATTAGATTTTGGTCTTAACTTGCTGTTATAACTTTATTTTTTTCTTTAAAATTACT # Right flank : AGACGAACAAGAGGCGTTAAAAACGACAAATGGATTTAGTTCTATTTTGAGAACTTTATAAATAAAAAATCAAATTATATCAGTATTATAATTGGCTTGAGTGAAGATTTTTTTATCTACTTATTCTTCGATCATCCCAGTAGCACGGCACTACAATCAAGTTGTTTTCATGTAACCGTGACCATAACCGAACTCCTAAATCCTGCTGCATGGTCTGCACTGTAAAATTAGAAATAAGCAACGTGGATTTCATGTTGTCATAACGATTATATAAAACCTTATGTACCAGTTCTAGACGTTTCTCATGCCGGTCATGCAGGCCATATTCATCAATCACCAATAAATCAAAACTAGAAAAATGGTCGATTACTTCTTTTTCAGAGCGTGAAGCATCTGACCAGGTGTCCATTATTTTTTGAGCAATTTCTGCACTAGTATAGTAGCGTGCAGATTTTGTACTGTTATACAGAATGTTGCGAATGATTGATGCACTCAGATGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCAGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCAGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 161639-157403 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPK01000002.1 Acinetobacter kyonggiensis strain ANC 5109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 161638 28 100.0 32 ............................ TGGATGAAACAAGGAATTCGCGACTTCAATTA 161578 28 100.0 32 ............................ AAGGTGTAAATCATGTTCTGGCCAAACTGTTT 161518 28 100.0 32 ............................ TATAGCAAAGTAATCACAAGTATAAGAAATGA 161458 28 100.0 32 ............................ GGCGTGCTTGCCTGATCATTCTGACCATCTAC 161398 28 100.0 32 ............................ ATCATCATTTTTTTATGGTGATAATCAAGAAA 161338 28 100.0 32 ............................ ACGATTATAACCTGCACCACTCATCCATTGAC 161278 28 100.0 32 ............................ AACTCTAGTTACAGAATGGTGGGAAACTTCAA 161218 28 100.0 33 ............................ TAATTACGACAACGGCGATGCATTTATTTTGCT 161157 28 100.0 32 ............................ GCCATCTGTTGCGCTCAGTACTGTTACTTTCG 161097 28 100.0 33 ............................ GCCTGAAACTGTATTCCATCGAGAGTTTTCAGC 161036 28 100.0 32 ............................ TATGAGGGCACTATTCGAAATGGCGAACTCTT 160976 28 100.0 32 ............................ GCAATACGAAATTCATAGGCCGTATCAATAAA 160916 28 100.0 32 ............................ ATCCCATGTAGGCTTTAAAAACTGGTAACGAC 160856 28 100.0 32 ............................ AAGGGATGCGAAAAGCCTCGAAAGAATCTAAG 160796 28 100.0 32 ............................ ATAAACAGGAATGATTGGGATGTTCTTCCCTG 160736 28 100.0 32 ............................ TTATACACTGAACGAAAATTATCGCTCAGCTC 160676 28 100.0 32 ............................ ACTGTTTACGAAATTCAATCTCATGCGCTTTT 160616 28 100.0 33 ............................ AATATCATTAAACATTCTATTGAGTGTTTTGTT 160555 28 100.0 32 ............................ ATTGTTAAAAACTCAAGGTGTTAAACGAGATG 160495 28 100.0 32 ............................ AATTGGGGTTCTTATTCTATTGTTTGTAAAAA 160435 28 100.0 32 ............................ GATCCACTTACAGACGACGGGAAAGCCACGAT 160375 28 100.0 33 ............................ GACGAGATGGCACGCTGGGCAAGTCAGGTAAAA 160314 28 100.0 32 ............................ TTAAAATACCGATCACTTATGCAAATTATAAA 160254 28 100.0 32 ............................ TATCTATCTGAAGTGAATAGAGATCATCTTGA 160194 28 100.0 32 ............................ TGTTGGATACTTACACCCAATTGTGACTGTGC 160134 28 100.0 32 ............................ TTTCAACTGTATATGATTCACGCCTTAGTTTC 160074 28 100.0 32 ............................ AATTCAAACGAGCAGCACCAGCGATAGCCAAT 160014 28 100.0 32 ............................ TCTGAGCGCTTTTCATGAGCAAAGATAAAACC 159954 28 100.0 32 ............................ ATAGCGGGAATATTGTCGGATCATGGGAGGTT 159894 28 100.0 32 ............................ ACAAGGAGATGAAGCGTGAGCTATAAAACAAT 159834 28 100.0 32 ............................ AGCAGGGATTACCGTTCCATTTGGCAAAGTTG 159774 28 100.0 32 ............................ TCGATGAGGTTCGCGGTGAACCACTACTGAGC 159714 28 100.0 32 ............................ CGTCCCAGTCACTACCAAGCCCGCGACCATCC 159654 28 100.0 32 ............................ ATCAAATTTTGCACCGTAATCTAGAGGGTTAA 159594 28 100.0 32 ............................ TGATTTCAGAGTAACAACAAATTCAGGAGAAA 159534 28 100.0 32 ............................ TGATCTAGAAACGCAAGGTTATGTGTCATTGA 159474 28 100.0 32 ............................ CCGCTAAATTCAGGGTTTGGTGGAATAGCTTG 159414 28 100.0 32 ............................ ATGCATTAAATTCATACCCGTACCACTCCTTT 159354 28 100.0 33 ............................ CCACGCTTGATAACCATCTGTTTCGTGATTTCC 159293 28 100.0 32 ............................ TGACCGTGGTGAATGGAACAATAATTCCACAG 159233 28 100.0 32 ............................ ATTAGATGCGCTTTATTACGGCAACAATTACA 159173 28 100.0 32 ............................ TTAACCCAGCCAAGCATTGCACCCCAAAACTT 159113 28 100.0 32 ............................ TGATACATCTGATGGACAAATGACAGGATTAT 159053 28 100.0 33 ............................ TCAAAAAGTTAGCGACGGCTTAGAGGTGCGTTG 158992 28 100.0 32 ............................ GCTTATCCCAGACGGCCAACCTACTGTCAACC 158932 28 100.0 32 ............................ TTCATTAGGTGGAGGTGGATTATCAGTAGAAG 158872 28 100.0 32 ............................ ATCATCAATAACACGCTGACATACAGAAGAAT 158812 28 100.0 33 ............................ ACCTTGAGCAGTGGTTGATGTTACCGAAACACC 158751 28 100.0 32 ............................ GTTTCCGCCTTCTGCTTGAACTGAATCCATGA 158691 28 100.0 32 ............................ TTGACATAACGACCAACCTAAACCATTAAAAT 158631 28 100.0 32 ............................ CAATACTAAACTCTGTCACAGATGGATATTGA 158571 28 100.0 32 ............................ TGATAATGATGCTCGTGATGTTACTCCAAAGC 158511 28 100.0 32 ............................ TTATATGCACATGGTTATGACTGGTCGGGGAC 158451 28 100.0 32 ............................ AGTAGCAGTATTAGTCGTATTTTCTAATGCTT 158391 28 100.0 32 ............................ TCAAATACATGGCCTTTGCACTTATTCCACTT 158331 28 100.0 32 ............................ TTCATTAGGTGGAGGTGGATTATCAGTAGAAG 158271 28 100.0 32 ............................ TATTCAATCTTTGCCAGGGAAAATTTTCGATT 158211 28 100.0 32 ............................ AGCCGCGTCGATACGTGTGCCCTGAATGCGAT 158151 28 100.0 32 ............................ AGAAACAGTGTGATCATTGAAAGTTATTAATC 158091 28 100.0 32 ............................ GCACACTATATTAATAAATTTCTTCGATTAGT 158031 28 100.0 32 ............................ ATTCATACGTGCAATGCCCGCCATGATGTATG 157971 28 100.0 32 ............................ AAAAGACCAATACAGCGCCGTCCGATAATAGC 157911 28 100.0 32 ............................ TTTGTAGCTCTTCAAAGCTATCAGCTAGGACT 157851 28 100.0 32 ............................ ACATCATCAACCCGATCTGGTGTTGGTGTGGT 157791 28 100.0 32 ............................ TATGCACCTACACGCTCATTTCTACAAGAGAA 157731 28 100.0 32 ............................ AAGAACAATCCACCCAAAAAATTGAGTTGATT 157671 28 96.4 32 ............A............... ACTTACCCCATTGTGCCAATTCATTCTGCATC 157611 28 96.4 32 ............A............... TTTTCAGGGCAATATGACAGCTTAGTTGCAAA 157551 28 96.4 33 ............A............... TGAAAGTATTTCAATGACGAAGCAAGGGGCTAT 157490 28 100.0 32 ............................ ATACATCCGTCATCTCAATGCTATAAAAGCCA 157430 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================= ================== 71 28 99.8 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GCTGATTTGAAAAAACTTGATCTTAAAAAATGGTTAGATCGATTAACTGATTATGTTCACATCACTTCTATTCGAGAAGTCCCAGAGAATATAAACGGTTACGCTATTTATAAGCGTAAGCAAGTTAAAACCAATGCTGCACGTTTGGCCCGCCATCGAGTAAAACGCGGTGATATTGGCTTTGACGAAGCTTTAGCTCGCTATAGCAATGTAGTGACAACGACGAATTTGCCATTTGTCCAAATGAAAAGTTTAACTTCAGATCAAATGTTTAAACTTTTTATAGAAAAGCAAAATGCTGAACAATCTGAAAGTCAGGTTTTTAGTACTTATGGTTTAAGTTCAGAGTCATCTGTACCAGAATTTTGACCCAATATTTTTTCACTCTTTAACAGTTTAATAAAATCAATGAGTTATAAAAGTGGGTTGAAACTTGGGTCTTTTGTAGATTATGAGTATTAACTCACTGTTATAACTTTATTTTTTGCTATAAAATTACT # Right flank : TTCATCAAAGCTCATGTTAGAACTTAAAGCTATCAGGAGCATTTGGAATAAGATGAATACGTTTTACTCTAAATAGGAACAGGTCGATTCAACAATCAAAAAATTAGATTTAATAAAGCCAGTGCATGACATCTGTGCGGAGTTTTTCACTTACTATATACTTTTTTGTAAAATATATTCCCAAATGAGATAACCTAAACCGAATCCAATGAATGCATAAAGTGTGATGATGAAAAATACAAAACTCGCTTTGTTTTTCTTTTTTAATGAATTCATATTGATGCCCACTGCTTAGCCTTTAAGATAACATCATTATGTCGAGTTTAGCTTTAAACGTGTAGATACAAAAAATGATTAAAAAAATATAACAGATTTATGTGTTTTTATTCATCTGTTATAGTTATGTGCATATAAATCCAACAATAGAAATTATAAAATACTGACTTTTATGAATCAATTGAGGCTTTAAACGAGATAAATTATGATCGTACAGAAGGGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 136629-134079 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPK01000006.1 Acinetobacter kyonggiensis strain ANC 5109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 136628 28 100.0 32 ............................ TCGGAAAGTTGTACTTCCTAACTTATCGACGA 136568 28 100.0 32 ............................ AGTGCAAGTTCTCCATTTAGGCTTAAAGCTTC 136508 28 100.0 32 ............................ CTTGGATGCGCTCTACTACGGTAATAACTACA 136448 28 100.0 32 ............................ TATATAAGTTTTACCAATAATACAAGAAATGA 136388 28 100.0 32 ............................ TTTCGTTGTAGCTTAGATATACATTTCTAGTC 136328 28 100.0 32 ............................ TACATTTGTCTCTTGTAAATTTTACAATAACC 136268 28 100.0 32 ............................ ATCTGGATTAGGTTTACAAACTTGAGTTGGTG 136208 28 100.0 32 ............................ ATCTGCAAATGTCAGATCGTATTGCAAAGATT 136148 28 100.0 32 ............................ ATATAAACATTTTTCACAAATGATCATGTTGA 136088 28 100.0 33 ............................ GTTGCAGTTTGAGAATTAGCTTCAAGTTGATTA 136027 28 100.0 32 ............................ ATCTACAGTCACACCAAATATTTCATCAGGCT 135967 28 100.0 32 ............................ TGACAAACAGTAGGTGCCCATCCGCAAAATAC 135907 28 100.0 31 ............................ TTGCTAATTCAAGATTGATCATGAGTTGGCT 135848 28 100.0 32 ............................ AATAATGAGGTTTCAATTGATTTCATTGAAGT 135788 28 100.0 32 ............................ TATTCGGAATTGTGGCACTGGCGCATAACGTG 135728 28 100.0 32 ............................ TTATCGCATAAGGAGATACGGCCCAAAAACAT 135668 28 100.0 32 ............................ GTAGTGAACCAATACCTATTGGATCAATGCTC 135608 28 100.0 32 ............................ GCTACAACATCGAAAGATTCCTCCACGGTTAG 135548 28 100.0 32 ............................ AATACCCCATTTAATCGCCCATTGCTCTAGTG 135488 28 100.0 33 ............................ TTGCGCGATATCGTCGATAAATACTGTTTCGAT 135427 28 100.0 32 ............................ TTATACACATCTTTCTGCATGCAAGTATTAAA 135367 28 100.0 32 ............................ GCGAGAAAACATGCGCTCTTTATCGTACTCGA 135307 28 100.0 32 ............................ AAATTCGCAATACCGGAAGCAAGTTTGACGTC 135247 28 100.0 32 ............................ TCCTGTTTTAATCACAGTTGCTGTATCGGAGG 135187 28 100.0 32 ............................ TTCTTGAAAAAGAAATCGTCGGTGAGTGGCAT 135127 28 100.0 32 ............................ ATCCGAAGTGCCGCCGTTTGTGGCCTTTTCTT 135067 28 100.0 32 ............................ TATTACCATTAACTCCCCTTTTTTTGTAATAC 135007 28 100.0 32 ............................ TCCAGTAGTTACGGCAGATGTTGTTGGGGGTT 134947 28 100.0 32 ............................ GCCTTGCTGATTATTCTTATACGCCTCACTGT 134887 28 100.0 32 ............................ GATACTTTCAGCGGAATTTCTGACGCGGTCAT 134827 28 100.0 32 ............................ GCAACAGGTGATGCAACAAAACCGAATACTGC 134767 28 100.0 32 ............................ GATGATAAATCCAGTCGCAACTTATCAGCAGT 134707 28 100.0 32 ............................ AGCATAAATAGTTGATGAAACAAAAAGTGATG 134647 28 100.0 32 ............................ ATACACGGGATCAACAATATATTCATCTATAG 134587 28 100.0 32 ............................ ATCACGAATATGCATGGACGGAACAAAGACTA 134527 28 100.0 32 ............................ AACCTGTTCAATGAATTGGGCAGTTTTGGTTT 134467 28 100.0 32 ............................ TAGAAGAACAGCAAGACATGTTCGCAGGTGTT 134407 28 100.0 32 ............................ AAACCTCACATATGAGGTTTGGGAATAAAGCA 134347 28 100.0 32 ............................ AAACCTCACATATGAGGTTTGGGAATAAAGCA 134287 28 100.0 33 ............................ CAAAATGAAAATGGCTGGACGCACAGCACGTAA 134226 28 100.0 32 ............................ AGACAGTCTCAAAAAATTATCTGAAATTAGAT 134166 28 100.0 32 ............................ TTTTGATATGTATGTGGTGGATTATGATTATG 134106 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 43 28 100.0 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : CAATATTTTCTTCTACATAGGCTATTTGACGTTGTAAATTGCTTATTTCAATGGTGTCGGCATCAATCAAGGTGATTTTCCCCACACCTGCGCGTGCTAATAGTTCCGCACTTGTACAGCCTATGCCACCACAACCCACTATAAGGACATTGGCAAGTTTGAGTTTTTCTTGTGCTTCTATATCCCAACCATCAAGAAGAATTTGGCGTGAATAAAGGTGCATTTCATCATCATTTAACTCTAAGTCCATGTCGAGTAGATTAGTCACTAAGTTGTCCCACTTGCATTTGCTGATTTATAACCTGCGTAGATTATAAAGGATATCCTCTTTCTGTTCTGTAGAAGTCTTTGACAAGAACTCATTTTTACCCCAATATTTCAAGCACTCTTTAATAGCCCTATAAAATCAATAAGTTACAATTCTTTAAAAAACTTTGGGTATTTTGCATTTTTTAGCATTAACTCCTTGTTATTTTAAAGCTTTGTCCTTTATATTTACG # Right flank : ACAATTTCCCTTTAAAAAACCGCCCTAAAGAACGGTTTTTAATTTAACAATAATAAAATGCTCTTAAAAAAGGCAAAATCTAATTAACCGACTTTTTGAATCCCTTGTATTTTGGCAATTTCCTGTTGTTTAAGTAAATTTCGCTGAATTTTTCCACTTGAGGTTTTAGGCAAACTTTCTACAAATTCAATCTCTTTTGGATAAGCATGCTTAGATAAACGCGAACGTACATATTCTTGCAATTTATGACTTAACGCATCCGAAGCTGAAAATTGAGGTTTTAAAACCACAAACGCTTTAACGACTTCAGTCCGTTCTGGATCTGGCTTACCAATCACAGCAGATTCAAGCACTTCACTACATTCCAATAATGTACTTTCTACATCAAAAGGACCTACACGATAGCCTGACGTTGTAATGACATCGTCAGCACGACCAATAAAATCAACACCACCTAATTCATTCAATCTAACTGTGTCACCCGTTAAATAATAATGACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //