Array 1 63937-67573 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPON01000012.1 Eggerthella lenta strain ResAG-49 ResAG49_contig_012, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 63937 33 100.0 34 ................................. TGCGCCGTTCTAGCGAGGTGATCAAAACGCTTGC 64004 33 100.0 33 ................................. TGCGCTATGAAAGCCCGGTGCTCGCGGCTCGTT 64070 33 100.0 35 ................................. CTGATCGAAGACCACGACGGGGACGCCGGGGTTAG 64138 33 100.0 32 ................................. CAGCCGGGTTGTCGGGCGCTTCGACGGTGATC 64203 33 100.0 34 ................................. TTGGACGCGCCCGCATCGACCTTGATGCGGAACA 64270 33 100.0 34 ................................. ATGCCCGGTGACGCATCTCCCATCATCTCCGGCA 64337 33 100.0 33 ................................. AGGAACGTGAAGCCGCGCGTGAGCTTCGTCATG 64403 33 100.0 36 ................................. CTTTGATGCTGCTGGGTATCCCCTTGCCCTTCGCGA 64472 33 100.0 33 ................................. AAGCGCGCGGCAAAAGAGACAAGCTCATCCAAG 64538 33 100.0 33 ................................. GAGACGGTCGCCCGATCGTCCGATGACGGGGAG 64604 33 100.0 33 ................................. ATCACTCGCAGCATCTTGGGAAACCTCCTTTTC 64670 33 100.0 38 ................................. AACGAACGCTCCGACATTGACGGCATCTCCCGTAGGGA 64741 33 100.0 35 ................................. TCCAGCGCGCTCATGATGGTGGCCCAGTCCATGGC 64809 33 100.0 33 ................................. TTCGCAGCCGCGCCTTTCGTGGCCATGTCTCGC 64875 33 97.0 34 ......T.......................... ACTCCGAGCGACTCGCCCGTGCGGGCGCTGCCGA 64942 33 100.0 34 ................................. TTGGCCGCTCATCGGTACAGACCAATCGCAGGAA 65009 33 100.0 33 ................................. GTTGTCAAGCTCTGCTTCGCCTCCCAGTCAATG 65075 33 97.0 33 ......T.......................... GGCCAGCAGCGCGACGCAGCGCCTCATGGCGAC 65141 33 100.0 34 ................................. CGTATCCCAGGTTAAAAAAATCTCCGCAGACGCG 65208 33 100.0 35 ................................. TTGTTTCGGCAGCACCAGCAGCTCACGCGGTCGAG 65276 33 100.0 33 ................................. TCGCCCGTCAAGCCGACCGGCGGCGAGGCCTTC 65342 33 100.0 34 ................................. TGGTGATAGATGACCTCGGAAAGGACGCGCCCAC 65409 33 100.0 33 ................................. CTGCAATGCCTGATCTGTTTGCCGATGTACTCA 65475 33 100.0 33 ................................. GAGAGCGCGGAGCATATGACGCAGTGCGTCTGC 65541 33 100.0 33 ................................. GTCAACGCCGGTGGCACGTGGCCTGCGTCCCTG 65607 33 100.0 32 ................................. ACGCGGCTGCCGTCCTCCATGCGCGCGTCCAT 65672 33 100.0 33 ................................. GAGACCGAAAGCCGCGATTCGTCGAGCATCGTC 65738 33 100.0 35 ................................. GCTTTCGTCTGCTACCTGCTCGTCAGGGATGCGCG 65806 33 100.0 34 ................................. CAGATCATCCCGAACCCGTGTTTCGACGAGGAGT 65873 33 100.0 33 ................................. CGCCTGCTTTGCAGGGTCTTGCAGATCGGCGGT 65939 33 100.0 35 ................................. TCCTTGACGTAGAGATAGCGAAACTTGCCGTAACG 66007 33 100.0 33 ................................. AACTTTATCACACTGTCTCGGCTCGATAGCTCC 66073 33 100.0 34 ................................. AAGCGCGGGATGCTCGTTGATCTTGTCTACTACA 66140 33 100.0 34 ................................. CGGCATGGACGGCGATGATCTTGTTGAGGGCGTG 66207 33 100.0 33 ................................. GGATGCGAACCAGAAGAGCTCTACGGTCTCAAG 66273 33 100.0 34 ................................. CATACTGTGAAAGGGGTATAGCCAGGTTCGACGG 66340 33 100.0 34 ................................. CGTCTGGTGATCTCGTCCATTCGATCTGCTCCCT 66407 33 100.0 33 ................................. CGTATCCCAGTACTACCCTGCGGTCGCTGGCGG 66473 33 100.0 33 ................................. TGCCATGCCCTGACCCCTTCAACGGTGGACATC 66539 33 100.0 33 ................................. CGACCTTGCGCGAGACGATGCCCGAACCGTCGG 66605 33 100.0 35 ................................. TCTCCGCTTTCGTCTCGCGGCCATTCCATCCCCGG 66673 33 100.0 34 ................................. CACGCACCCACCATGTGATAGCTGGTCGATCTGT 66740 33 100.0 35 ................................. ACGTTGACCTACGCTGAGAACATGCAGGACAATTC 66808 33 100.0 34 ................................. GTCTCTGCTGGAAGCCAATCGGTCTACATCGAAA 66875 33 100.0 35 ................................. GGGCATATCGGCATAGCATGGTACGAGGAAGCCGA 66943 33 100.0 33 ................................. AACAGAATGTCCTCGTCGTGGGCGCTGAAGCCG 67009 33 97.0 33 .....................A........... TGACGAGTATCGCCTATGGCTTGAAAGCGAGGT 67075 33 100.0 33 ................................. AAGCACACCACCAAGCAGACGCGCAGCCTCATA 67141 33 100.0 34 ................................. GTCATCTAGGACGTTGCCGGAAACGACATCCTGC 67208 33 100.0 34 ................................. GTGCCTCACCGGCCGGCACGTACGCTCGCGCACG 67275 33 100.0 34 ................................. CAGAACTTCGCGATGGCGAAGCAGAGCGGCTACG 67342 33 100.0 35 ................................. GTCCCCGTCGGCGGCTTGGTGTCCATGCTGATGAT 67410 33 100.0 33 ................................. TCGTCCTCGCTGAGGAAGTAGGGGTCGAGCGAG 67476 33 100.0 32 ................................. AAACGGTTGAACGATTTGCGGACGCTGGCGAG 67541 33 97.0 0 ................................C | ========== ====== ====== ====== ================================= ====================================== ================== 55 33 99.8 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : TGCGCTGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCGGGCCGACGTCGCTTGCGGAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAACAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAACCAACGTACGAAGCTGAAGGGTTCTTGGCGTTGTAGGACCATGGTGCGAGCATGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTAATGACACTATATGTTGATCGAAGCAGTAAATTTGCACATAATATTGCA # Right flank : CTGTTCGGGTTGGCTGGCAAGCTGAACGCTGACACGTCATCGTTCAGCTTGCGGGCGCGCGGGTTGAAGTCGCGAGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCCCTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCTCAAACGAGGGGGTAACCGATCCTTGCCGTCGCTTCCTATCGAGACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGCCTGCGCCGAGTTGTGAAAGGCGCAGGCGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAGCTCAAACGTCGTGCAGTCCACCAGCCCGCGATTCGTCAGCCGCAGCTCGGGCAGGCATGCCAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAGGCATGCACCTTCTCGCTCATCGTCACAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //