Array 1 587042-587309 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDAI01000056.1 Enterobacter kobei strain EC_53 Scaffold_60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 587042 28 100.0 32 ............................ CACTCGCGAGAATGAGCAAGGCGGCAGTCTAT 587102 28 100.0 32 ............................ GAACCACGGATGGATAAGCTCGCCCGGGCCGG 587162 28 100.0 32 ............................ GGAATACTTTCAGGATTCGAGCCGGGGATCCT 587222 28 100.0 32 ............................ GTCTTTTGCCCGCATATGCGCGTTTTTATAAT 587282 28 78.6 0 ...............C.....AACC.T. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCACAAGTTATTCGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGGTTGCCGGGGTTTATCGCTTATGGCGTGTTGATTGGCGAAGTGGTGGCACCGATGTTGATTATTGTCGGCCTCTTTACGCGACCGGCCGCGCTGATGCTGGCGTTTACGATGATTGTGGCATGGCTGATGGTAGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATTGGCTCGCTGGCGGTGGCATTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAGCACCGGCGTGGCGTTGAGGTTTGGGCTCTGGTATGAAGGAAAGGGTCTATGGACCCTTTTTTATTGGCTGTTTGTAACTTATTGATTTTATTGTGCTGAAATGTATGTGAAGAAAAAAGGGATCGAGACGATTTTTTAGGTTATTTCTTTATCTGACAAAGTGATAGGTGTAGATTGTTCCA # Right flank : ATGTAGTTCGGCACAAACAATGTGCCGCCTGATTATAAGCCCGGTGGCGCTAGCGCTTACCGAGCCTACGACGATCCAGCCCCTACAAGGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAACGGGGGCACCGCGTCAGATTATGCGAGGACCAGATCCCCCTGCGGATGGCATGAGCACGCCAGCACGTAACCTTCGGCAATTTCCGCGTCGGAGAGCGTCATGGTACTGGTGACAGTGTACTCACCTGAAACCACTTTCGTCTTACAGCAACCGCATACGCCCGCACGGCAGGCGGCCACTACCGGTACCTTATTGCTTTCGAGTGCCTCCAGCAAAGTCGTTCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGTAGCTTAGTAAACTGAATCCCGCTGGTTGCCGCCTCTGCTACCGGCGTGAAGAATTGCTCCTTGAAGAAGCGGGTCACGCCAAGCGCCTTCACTTCTTTCTCGACGATATCCATGTAAGGC # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 602455-602964 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDAI01000056.1 Enterobacter kobei strain EC_53 Scaffold_60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 602455 28 100.0 32 ............................ CTATATGCTGCGCCGCCTCCGCTACGCTCAAA 602515 28 100.0 32 ............................ CGCCACGGTAACGGGAAGTTGCGCGCAGCGGC 602575 28 100.0 33 ............................ GAACTGGCGGGCGTGCCGCCGTCGTCTCTGAAA 602636 28 100.0 33 ............................ GCGAAGTACCGTGCTCTGGTGCGTGCTGATTGT 602697 28 100.0 32 ............................ TCAGTCCATTCTCCGCTACGGATTGCGTCACG 602757 28 100.0 32 ............................ AGAACTCGTCCCAGATGTACTGGCAGAGCTGG 602817 28 100.0 32 ............................ ATAACGATGGTTGTACGGGATACCATCGATGG 602877 28 100.0 32 ............................ ATCGAAAGGAAACATCGACAACTGAGCGAAGT 602937 28 71.4 0 ...................A.ACCTCTC | ========== ====== ====== ====== ============================ ================================= ================== 9 28 96.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCGCAGACGCAGCCCGTATGCCGTTGCCTTGGTGCATACCTGGAAGAAATGAAAACCGGCCTCACAGAATCAATGCGTGACTTTCAGGTGGTGGAATTTGAGAACGAAGCGGAAGAACCGCGACAAAAAGAGTGGCTGCTCGAAGATACAGAAACGAAATGCGACTACTGCCGGGCATTAAACCATGTACTGCTGGTATCGCATTTTGACCGCGATATGTTGCCGCACCTGACGGGATTACTGCATGACTTCACGCATTCAATGGCGGCAGATGTGGTATCTCCTCATGATGCCGGAACGGGAAATTCTGTTATTTCTTGAGTGGAGTGCGCACCGCCAGGGGCTGTCCCTTGGCGACAACGGAGAAACCCTTTTTTTGAGATGCTTTATAACTCGTTGATTTATAATGTTTTTTTTGCGTTGCAGAAAAAAGGGTTTTGCCTGTTAACGTTGCTTAGTTGCCTTAATAACAATAAGATAGCGCTGTTTTCTTCCT # Right flank : CAAACCAACCCACTGTAATATTCACCAAACCTATTTAAAACCTTATACCATCCAATCTGCACTCTCTATTTTCACAATAGATAAAAAACCTATTCACGCATAAATTATATTCCAGCAAATATATTATTCGTAAAAATAATATATTGTCATGAAAACATGATTTCCCACTTTATTACCACGATGATTATTATTCATTTGATGTCCGTCACATTTGTTTTCATTCGTTCTTCGCTAACATACTGTGCATTCAACACCTTGAAATAAAATCCCTTGCCATGTCCGTAAAAAGCATCACCCCTACAGACTTAAAAACCATTCTGCATTCAAAGCGTGCCAATATTTATTACCTGGAAAAATGTCGCATTCAGGTGAATGGTGGCCGTGTTGAATATGTTACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCTATCGCTAATACTACGGCGGTAATGCTGGGAATGGGAACCTCCGTTACACAAATGGCAATGCGGGAA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 612452-613800 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDAI01000056.1 Enterobacter kobei strain EC_53 Scaffold_60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 612452 28 96.4 32 ..T......................... ACAATGTTTGCCAATACAAACAAAGTCGGCCA 612512 28 96.4 32 ..T......................... GTCCAGATGGCTTAAAACCAGTCGTTTTCTGG 612572 28 96.4 32 ..T......................... GTCGCGGTTTGGCAGCGCATCGCAGATATAGA 612632 28 96.4 32 ..T......................... TCCTCGAGCTTCTAATTCAAGAGTGGTATGTT 612692 28 96.4 32 ..T......................... AATGGCGAGCCCAGCAACTTCCGACGCTTCCA 612752 28 96.4 32 ..T......................... AACGCAGCTCTGCGCGCTCAAGTCCATCGCGG 612812 28 96.4 32 ..T......................... ACGAACTGCGCCCGGATCTGCACCCGACACCA 612872 28 96.4 32 ..T......................... GCTGCTCTCCATGTCTTTTGCGCGCCGCATGA 612932 28 96.4 32 ..T......................... ATTATGGCGAGAAAATCTCTGAATATTCGGTA 612992 28 96.4 32 ..T......................... GTTATTTGTGACGCCATTTTACTGGCCGCCGG 613052 28 100.0 32 ............................ AGTCTGCGATTTGTTTGAGTAACGCCACGTCA 613112 28 100.0 32 ............................ TGAATTAGCTGTTCTTTACTGAACCCCTGCTT 613172 28 100.0 32 ............................ ATTAGGTACTGCCAGTGCTCAGTCTGCTATGG 613232 28 100.0 32 ............................ AGCGACCGTAGAGATTGAGGGAAACCCTCCCG 613292 28 100.0 32 ............................ CTGGCGATTAGCTGATATAGATAAATTCAACT 613352 28 100.0 32 ............................ ATAATTATGCAGTAACCCCCTTAGTGCGCATA 613412 28 100.0 32 ............................ CGCTGAACTTCGCGTTCTGTTTTCACCAGTCC 613472 28 100.0 32 ............................ AAGCGGATTTTGAGGCTACCGGAAAAATCTAT 613532 28 100.0 32 ............................ GCCGCCGCACCGATATTACGAACAGCATGGAA 613592 28 100.0 32 ............................ TATCGTGCTGACTTTGAGGATTTGCCGACCAT 613652 28 100.0 32 ............................ ATCATCCCGGGTCAGCTCGTCACCAGCCGGTA 613712 28 100.0 32 ............................ TTAAATGCGCAGAAGTCACCGAAGTTGTTCAG 613772 28 89.3 0 C.C............C............ | C [613796] ========== ====== ====== ====== ============================ ================================ ================== 23 28 98.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GAAACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGCCGGGCCACGTTACGTTCATTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGGATATTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAGCCGCATACCTCTGTTTGCAGGTAAACCGGCGTACCGCCAAAGCGCGTTATCAGCGGGTTTCTGCGCGGGGATCCATGTTCTCATGTTGCCTCCTAGGTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATAATGAATGGAATGGGTGTTTTTTATGCAGGGGGTATAAGAAGAAGGGTGTTCGACCCTAATTTTTAGTGCGTTTGTAAGGCATTGATATTAAATGGGTATTTTGAGGGGGTAAAAAAGAGGGTAAACGAAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGGGGGGATATTATTTGA # Right flank : AATAGAAAATAAGGTCTCCCCCTCCTTACTTTCTACACTGTCGAGCAGACAGCCCCGCAGCTGAAACGAACCGCCAAATAATTGTTCAAATAATCGACTGCGCCACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTTAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTTTCGGCG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //