Array 1 377210-376249 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS990119.1 Phocaeicola plebeius DSM 17135 Scfld_02_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 377209 32 100.0 33 ................................ CAAAGCATCCGCTTCGTGAGCCTGGAGATAGAC 377144 32 100.0 34 ................................ TATGTCAAGGATAAATATCTCTATATAGCCACAA 377078 32 100.0 34 ................................ ACGATGAACTGATGAAGTATCGTGACCTGTGCGA 377012 32 100.0 34 ................................ GTCGAAGCGGCCGACATGATTAATGTTGCCTTGG 376946 32 100.0 33 ................................ ATCATGCGTCATACCTTGTAATTCCTCATTTGT 376881 32 100.0 37 ................................ CACGATTCCATCACCGTCCAAATCAGGCGATGTGTCA 376812 32 100.0 35 ................................ AGGATAACATCGGATGAATCCGTATTGAAAAATAC 376745 32 100.0 34 ................................ TTTCGGTGAATGAGTCTCACATGACCAAAAAGTT 376679 32 100.0 34 ................................ ACAGGAAGTGGAAGAAAAAATACCCGAAATGGAG 376613 32 96.9 34 .........T...................... AGGGGCATCGAAGAATAATAAGAAATGATAATGC 376547 32 100.0 35 ................................ TGGTCGCTGAAGGTTGCTCAGAGCGAGAATCCTTA 376480 32 100.0 35 ................................ ATGCAGAACAGCCTTAAAAGCATGATTGATACCGC 376413 32 96.9 33 ..T............................. GTAAAGCTGCACTGGACACATTCAACCAGTTGG 376348 32 100.0 35 ................................ CAGAACGAAAGTTCTATGGCTTGAAGATGAAGGAG 376281 32 87.5 0 ...................T.........CTG | T [376254] ========== ====== ====== ====== ================================ ===================================== ================== 15 32 98.8 34 GTCGCACCTCACGTAGGTGCGTGGATTGAAAC # Left flank : GTGAAATAGATGATTATCCTGTATTTTTAATTCAATAAGAGTTATGATGGTTTTGATAACATACGATGTGAATACCCTTTCTAATTCTGGAAAGAAAAGATTACGTAATGTAGCAAATGCTTGTAAGGATTATGGACAAAGAGTGCAGAATTCTGTTTTTGAGTGTTCTCTTACTGAGTCACAGTTTCTGATACTGAGAGCTAGGCTAGAATCCATTATTAATATTGAATTAGATAGTATTAGATTTTATTTTCTAGGTAAAAACTGGGAGAGAAGGATTGAAAAGATAGGAAAAATAACGTCTTTTGATATTTCTGGTGATTTAATAATTTGAATGCGAACCTAAAGTGATGCATAAAAGCTGGTTGGTTCGCATGCATTGATTTCTAGATGTTTAGATTTATTTTTTCTTTTTGAAAAGTTTTAAAAAATGTAGTATGTTATGGGTTCTCAGAGAGCCCTTTTTATATGACTGAATATAAGACGATTAAGAGTTTACT # Right flank : AAGTTAAAGTAATACATGTTCATAGTTGCATTTTAAGTAGTGTGCAGATTAAAGCTAAGATAACCACCGTATATATCTATGCGGGTTATCAGTACGACGAAAAAGACTGAAATATATTTGGTGCGCATAACATATGAAAACTCTATAGTTCTATATATTATGAAAGTTGATGAAAAAATTTATCTTTGTATTTGCAAATTTCTATTAGATATTAATCTTTAATTTTATGCAAATACCACAATCACAAATACTTACCACCCGATACCTTAATAGAGTATTTGATAAGACTGTAGCGACTTATAAATATTATTGGTTTCTGGGCATACTTGATTTATATGTAAAACAAGGGAAAACAAGGATGAATGTCTGGGAAATTATGGTAACAATGGTTGCGAATGCTTGGTATCCTGTTAATTATTTCCGGCTTTCGTTCGGTAAATCGGAATCACTTTATGATGCTATTCTAACTTTACAGAAGGAAAACAATATTCCTATCAATT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCACGTAGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //