Array 1 430006-431132 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATUF01000002.1 Varibaculum cambriense DSM 15806 F605DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 430006 29 93.1 32 ..........T........A......... GCAAGATGTGTTCCCATGCAAGCATAGGAACC 430067 29 96.6 32 ..........T.................. GACGTTTTCAAAGGCGGCGCCGCGAAAATGCA 430128 29 89.7 32 .............G..T......G..... ACCGACCAGGTGGAATGCCCAAGAATCGCTTG 430189 29 100.0 32 ............................. ATGTCGATGGTCGCATATTATGACCGAGCACA 430250 29 100.0 32 ............................. GGCATTGAGTAGCCCTCCTGCCAAAACTCCTG 430311 29 96.6 32 ............................T AATTTTGAAGCGAAACATCCCCGCGCGAGAGA 430372 29 93.1 32 A.......A.................... CGTGGGATGATAGTTCGCCACATCCCGGCAAC 430433 29 100.0 32 ............................. TCCCAGCTCATAATCGTGTCCACCAAAGGAAC 430494 29 96.6 32 .............G............... CAGGTAGATCAATCCGATATCGCCGCGTGGCT 430555 29 89.7 32 ......T....T.......A......... ACCCGCAAAATCGAGGGCGAGCTAACCCGCAT 430616 29 96.6 32 ..............T.............. AGCTACAACGAACTAGCCACCGTTTCAGGTGC 430677 28 89.7 32 A......T.........-........... ATTAGCATCGAGTGGCAGGACAGGCAAAAGCA 430737 29 100.0 32 ............................. TTGATCCTCGGTAAAGGTAAAATCCAGGGTGA 430798 29 89.7 32 ............T........A......A ATGATTTGTCGTTGCCGTGATCCCCGAGGTGA 430859 29 100.0 32 ............................. ATGGCGCACCAATAGCCGCGCATCCCGTACCA 430920 29 100.0 32 ............................. ATGTGGAACCCCCAAACCCACGTCATCAAATG 430981 29 100.0 32 ............................. GGGCTAAACGCAGGAGCAGAAGCAGGCACGCT 431042 29 96.6 32 .......T..................... GAAACCTGGTGCGCCACCAACGGTGAACGCCC 431103 29 89.7 0 .............T..T...........G | T [431127] ========== ====== ====== ====== ============================= ================================ ================== 19 29 95.7 32 GTATTCCCCGCGCAAGCGGGGGTAATTCC # Left flank : ACGCTATGACCCGACCTTAGGATTACTAGTAGATTCATAAACCCTATTTGAGAGGCGCAGTCGTGTCCTACTCCGATCAAGCTCTAATATTTGCAAAAATACCCGTTAACCACCAGATACGTGAGGCGGATCGTATCTCCTTCCTATATCTTGAATACTGCCGTATAGAGCATAGAGGAATAATAATTATGGCTGCACAGCTTGCGCCTGTGCGGCATTATCACTAAATCCCGCCCTAGGAATAATTCATATAAGTGATGCTAGGGCGCTCCTGTTCGGCCTAGCTGATTATTACAAAACAAAATTGGTAATCCCACTCGCATTTCGCGCTTTAGACCAGAGCGACCCAAGGACGTGGAATAGAGGTGAGCTTTGGGACTTCGACGGGCTCTTACTTGTCGAGAACCTTCTTTTGTAGCTAGCAATCGATAAAAATCAGGTTTGAGATGTTAGTTCAACAATATCGCCAACGGTTAATCTAAAATTGCCTGTGGGACAGT # Right flank : GACTATATCGAGCGCAAACCTTCCCGATTATCCGCTCCAGTTGCAGGCTACTACAGCGACAGCCCCACCAGGTGTCCGACGGCACCGGTAATCAGCATGGCGAGGGCGCCGCCGGTAATAACCCTAATGACGGCACGTCCTCGGGGAGCTTCCGAAAGCCAAGCTGAGGTGTAACCCGCCAAGCCTAGCGCCACCAACGTCAAAATGAAGGTGGCGACAAACTTGGAGGCCGGAGGGAACAGCAGGATAGCCAGCATCGGCAAGACCGCGCCTAAGACAAAGGAAATCGCAGAAGAAAAAGCCGCATTCCACGGGTTAACAAATTCTTGCGAATCAATCGAATAACGCGCCTCTACCTGCGCCGCCACCGGATCAATCGCAGAGTACTCTTTCGCTACTAACCGGGCGGTTTCCGGCGAGAGTCCTTTGCCCTCATAGACCTTAATCAGACCCGCAAACTCACCCTCGGGATCTTTCCTCAGCCGGGTATTTTCTTTATG # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGCAAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //