Array 1 180849-182798 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALSU01000029.1 Streptococcus agalactiae GB00092 ctg7180000003983, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 180849 36 100.0 30 .................................... CATACTAGCTTTCATGACTTTCGAACCTTT 180915 36 100.0 30 .................................... AACACAGCTTCCTCGAAAGGGATATATCTA 180981 36 100.0 30 .................................... AATATTGAAATAGTTTGTGCAGATGGTTTT 181047 36 100.0 30 .................................... TCCTCGCCGTCGACATAACCAGCCATTTCA 181113 36 100.0 30 .................................... AACGATTTGCACAATAATCCAGGACAATTT 181179 36 100.0 30 .................................... AAGTGTGTTATCATATCTTCCTTTGGTTTT 181245 36 100.0 30 .................................... AATAGGCTTAGGCGCATCTGGTTCTTTACT 181311 36 100.0 30 .................................... ACTATAAGTATTTTGTTTTATCCCTAGTAG 181377 36 100.0 30 .................................... TATCTACGAGACGAAAACAATTGCCAATGT 181443 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 181509 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 181575 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 181641 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 181707 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 181773 36 100.0 30 .................................... ATTACTTTCAAGATGTCTATGACTATATGC 181839 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 181905 36 100.0 30 .................................... CCCCCAAAGTTATCAAAGAAGATGACCATA 181971 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 182037 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 182103 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 182169 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 182235 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 182301 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 182367 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 182433 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 182500 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 182566 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 182631 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 182697 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 182763 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGCCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //