Array 1 18634-18947 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIY01000093.1 Streptomyces sp. SID4945 SID4945.c100, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 18634 30 100.0 31 .............................. CGCCGCGTACCGGGTCCAGGAGGCCCGCGAA 18695 30 100.0 32 .............................. CCGGCGCCCACCGCGCCGCAGGCTTCCCGGCC 18757 30 96.7 31 .............................G CCTTGTTCATCTCGCGGCCGATCCGGCGATG 18818 30 80.0 9 ..............CCGT....C.....G. CACGTACGC Deletion [18857] 18857 30 90.0 31 ..............C..A...........G GGCGACGCACGCGGCCCTGGAATGGGCCTGG 18918 30 80.0 0 ...T.......AT.C.....A........C | ========== ====== ====== ====== ============================== ================================ ================== 6 30 91.1 27 CTGCTCCCCGCGCGTGCGGGGATGGCCCCT # Left flank : GTGGCGGACCCGCTCCGCTGCGGTTCCCGCCTCGGCCGTACGGCCTTCGCCCGGGAAATACCCTCCGGGCCGTACGGTACGGGGGGCGCGGACGGGGCTCTGCGAGGCGCGCGGCGGGGCCCACCGGCCCCCCGTACCCCGGCCCCTGCCCCACCGTGCTCCCGGGGATGCCCACCGAGCGCCCCCTGTGCCGGGATTCGGTGGCGGTGGCGGTGGCGGTGGGGATCACCGTACGGGGAATGCGGGGGGCGCGTCGTGGGGCCGAGGGTATCGGCGCCCCTGGCGCGATCCGCTGCGCGGCGGCCCCGGGGGGCGAGCCGGCTGTGGGCGGGGTGGCCGTGTGGGGGCGGGCGTGGATGGGCGTGGCCACGCGGGGGCGGGCGTTAGGCTGCGGACGGTCCGAAGAACTCGGGCGCCGAACCGTCTTGTCCGAAAAGCCGGACTCTCCACTTCCTGCCGAATCGACGCCATCTCGAAGGCAAAAGGACTGCTCACGCAGA # Right flank : CGTGCGCGGAGGGCGGCGGGTGCGTTGGCGACGGTCAGATGCGCGCGCTGTCGAGAAAGCGGCGCCACGCTGTCGGGCTGAATCCGAGGTGCGGGGAGGCGAGATCCTTGGAGTCGCGAACGGCTAGCCGGCCCCGGGAGGTGGCGACCTCGACGCAGTTGCCCTCGGTGCCGGAGTAAGGGGACCTGATCCACGTGGGATGCTGTGGATCGTCGTGCTGGTGGTTCACTCGCCTGCCATTTCGTTCAGGACTCTGCGGATGAGAGCCCGCGATTTCGGGGGGTCGAGCGCGGCCATGTTGAGGCGCCGGAAGAGGGCGGCGAATCGCTCCGTGTCGCCCGGCTCCTCGTAGTAGACCGTGCCGTTGTTCAGCTCCCCGTACACGAGATCCTCTGCCGAGGACGGCGAGAAGCTCATGATGACGAAGGGTCCGAAGAGTGCCGCGTTCATCGGGCTCTCCTTCGGCAGGATCTGCAACTCGACGTTGGGCAGGTCGCTGT # Questionable array : NO Score: 4.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:-0.47, 8:0.8, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGCCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 21132-21772 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIY01000093.1 Streptomyces sp. SID4945 SID4945.c100, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 21132 30 100.0 31 .............................. CCGCCGACGCGATGCAGACGGACGCGCAGGG 21193 30 96.7 32 .............................C CACTGGAGCACGCAGAGGCCGAGGCGAACGCC 21255 30 96.7 31 .............................T CGCCCGGCCGCTCAGGACCCCGCCACGGCAT 21316 30 96.7 31 .............................T CGCTCGCGGAGATCGGCGGCGGGGGTGTCGG 21377 30 100.0 31 .............................. GGACCATCGATCTCCGCACCGGAGCCCTACG 21438 30 100.0 31 .............................. TGCTGGACACCGTCTTGAGCAACCGGCCGAC 21499 30 100.0 31 .............................. ACCCCGACGCCGATCACCTCTGGGTCCGGGA 21560 30 100.0 31 .............................. AGGAGTCGTCCATCCAGGCGTGCCGGGGCTG 21621 30 100.0 31 .............................. CGGGCGCCTCGATGTGGGCGACGGGTCCGCC 21682 30 96.7 31 .............................C ACCCGGAGGCTTCACACTTCGGGTCGTACTC 21743 30 96.7 0 ............................G. | ========== ====== ====== ====== ============================== ================================ ================== 11 30 98.5 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : ATCCGCCAACGGGCGGGAGGTGGCGGCCCGTGCGACCCCTGGCGCGTGACGCGGAACGGCTGCTGTACGAGGACACGGCGGTCCCCGGCTTTCGCGTACGGAGCTGGTGTCTGATGTGTGGGAGGTACTCGCCGGAGGGCGTGAACGCGGACTCGGCGCGGATGTGGTGCCTGGAGCACAACCGGACGACCGGCCATGCCAGTTATCGCGTGGCAGAGACGCAGTACTTGGTGGTGGCCCGGGAGGTGGGGGAGCCGGGGCGGTGTCGTTGTGGGAGGGGCGAGTCGGAAGGCTGAGGGGGGCGCGAGGTGAGGCGGTGATGCGGCGGGGAATGCCGCTGGCCGGCTAGGGGGGCGTGGCAAGTCGGAGCGAGGTGCCGCGGGGCTAGGCTTCGAGCGGATCGCGCCTTGCGACGGCGGTCCGCTACGCCCGAAAGGTCGGATTCCTCGATCCTTGCGCAACTGCCGCCATTGGCCCGCTAAACCTGCTGGTCACGCAGT # Right flank : GGAACGGCGCGGAGTCGCTGAAGTGGATGGGCTGCTCCCCGCGTGCGAGGAAGTTTCCGCTGCGGGACGGCGCCGCAGGATCGGCCTACGCCGATCCGGGCCGTTTCAGCAGCAGTTCGTCCCCCGCGCGGAAGCGCTCGGCGCCGCCCTCCTCCCATGTCACCACCACGAACAGGTCACCCACGTACGACCACGAAGCCTGCGGGGTCACGCAGGCCGGGGGATCGGGGCGCAGCTCGCCCGGCGGCTCAGTGGTGCGGGTGAGCCGCTCGTCGATCCCGCGCGACTCGGCATGGGTCGCTCCGGCGGGCGGGATGCCGGTCGGATACGTACGCCGCGCCCCGGCGCTGTCCGGGGGTGCGCGCCCCTCCGTCTTCGCGATCCGTCCCGCTATGCTCCACCGCATGTCCACCAGCACCCCCGAGCCCGCGCGGCGCGGTCTCCTCACCGAGCGCATCGCACGCGAACTAGAGCACGGGATTCGGACGGGGGAGTACGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 23051-24170 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWIY01000093.1 Streptomyces sp. SID4945 SID4945.c100, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 23051 30 93.3 31 ............................GT CGTGTTGTCGGCGAGGACCTCGCCCTCGACG 23112 30 96.7 31 .............................T CACTCCGCGTGGTGTAGGCCCCGACGTCGGT 23173 30 96.7 31 .............................A GCAATCCGGGGAGCGCCGAGAGTCCGGCGAC 23234 30 100.0 31 .............................. GCGAGGACGTCTTCCCGGAGGACAGCCCCGG 23295 30 96.7 31 .............................C GGACGGCTGCGGGCGGTCGCTGAGAGGGGCG 23356 30 96.7 31 .............................C ACCTCCCTGGACATGTTCCTGCTCGACAAGG 23417 30 100.0 35 .............................. AACTCGACCATCTCGAAGGTGATTCCGCCGCCGAG 23482 30 100.0 31 .............................. CTGATTTCTTCCAGACCTGGAACCGCTTGGA 23543 30 93.3 31 .......................A.....C TGCTCGCCACCGCGATCAAGGCGACGGCGAA 23604 30 96.7 31 .............................T CCCGCAGCACGGCGCGCCGTTCGGCCACCGG 23665 30 96.7 30 .............................C CGCCCTCTCCCCGCCCCGGCCGAGCCGATG 23725 30 100.0 31 .............................. TCCGGTTATCCGCCCCCGGCCTGTCCGGAAA 23786 30 96.7 31 .............................C GGCTGTGGGAGATGCCGTGGGCGTTCGTGTC 23847 30 96.7 19 .............................T GGACCGGCACCGGCTCGGC Deletion [23896] 23896 30 96.7 31 ............................T. ACCTCGCGCTTCTGTTCCAGCTTCAGCCACT 23957 30 100.0 31 .............................. CGGGCGCCCACAAGGCGTGGACCGCGACCAG 24018 30 100.0 31 .............................. GCGGCGGCTCGTCGGGCGGCGGTGAGGTCTT 24079 30 100.0 31 .............................. AAGCTGGACGCGCAGAAGGCGAGTGCGGACG 24140 30 93.3 0 .............A...............C | G [24166] ========== ====== ====== ====== ============================== =================================== ================== 19 30 97.4 31 CTGCTCCCCGCGCGTGCGGGGATGGACCCG # Left flank : ATCGCGGTCATGCGGGCCGCCGTCGTCGCCCTGGAGTGCGCGGACGAGCCGGTGAGCAAGGCGCGGGCGGACCTGGAGTTCCACGAGGCCATCGCCGTCGCGGCCGGAAATCCCGTACTGCGGATCATGCTCTCGTCCATCAGCGGGATGATGTTCGAGATGATGCTGCGCTCGAATTCGGACCCGAGCATCGCCGAGCCGGGCGTCCCGCACCACCCGGAAATCTTCGAGGCCATCGAGCGCCGCGACGCGGAGCTGGCGGTCGAACGGATGCGGGCGCACCTGCGGTTGGGACTGCGGACGTACGGGCGGGACCTGGACGTGCAGGTGGACGTGATGGCGAAGCAGCACATTGAGATGTTGTTGGGGGAGGGGCGGGGGTGAGGGAGAACGGAGGTCGGGCCGCCATGGGTTGTATGTCGGATGTTGTAGATATGCCGGAATTCGCAATTGTTGCGGGCACGGCTCCGGGGCGGGGGTAAACCCCCAGGTCGGAAAGA # Right flank : GACGGGGGCGCCGGTTTCGGTCCTGGGTGACTGCTTCCGAGCCTCCGGTCATGTCCCGCTCCAGGGGGATGGGCGAGCATCAACGGCGAGCATCCCCGGTATCTGACGGCTCCCCTCCCGCCCCATCAATCCCTCCCGCCCCCCTACCCTCCCCCCTCGCCTCCTGCTAGCCTCCCTCTCGCCCGGCCCAACTGGTCCTACCAGTCGGACCGCCGAACCACCCGCCCCCCAGGGAAGCCCCCGCATCCGCCCCCACACCCCCGTCCTCCCCCGTCCCCCGCCCCAGAGAGGTGGCACAACGATGTCCACCCCCCGGCCCCCGGTCGGCCGCCCCACAAGCCACCGGCCCCCGACCGGCAACCCTGCCAACCCTCCAGGCCCCGAGGCCCCGGCCTCCCGCCCGGCAAGCAGCACGCCCGCGCGCCCCGAACCCCCAGCCCCGCACCCCGCACGCAACGCACCCCCCACCCG # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //