Array 1 15719-14165 **** Predicted by CRISPRDetect 2.4 *** >NZ_JZNC01000045.1 Escherichia coli strain HT2012DB09 NODE_74_length_251562_cov_37.886662, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15718 29 96.6 32 ...........................T. TTTTTAACCGTCTTCAGGCATACATTCTTGAA 15657 29 100.0 32 ............................. GAAAAAAACGCTACAAAAATGAGCTACGAAAC 15596 29 100.0 32 ............................. TTCGTGCCAGGGCGCGGCGCGCTTACCGCGAA 15535 29 100.0 32 ............................. AGTGATAATTTAATACACACTAAATTCAGTGT 15474 29 100.0 32 ............................. GATAATTGAGGCCGCAAACGCCCAGGGCGGCT 15413 29 100.0 32 ............................. TCGCAGATAGTACAGAGCAACGCCAGCGCGCT 15352 29 100.0 32 ............................. CCAAACTTACAAGTTGAACGAGCTTTCGGGCA 15291 29 100.0 32 ............................. AAAAACACGCGCGAGCAAAACTTTCATTTGCA 15230 29 100.0 32 ............................. CCATTACCTATATTGATGCCCCCATCGGCACC 15169 29 100.0 32 ............................. AACGAAAGCAGCCAAAGAATGAACTCAATGAA 15108 29 100.0 32 ............................. CGTACAGTATAACCTCATCCGGGAGCGTCTCA 15047 29 100.0 32 ............................. TTGATGGAGCCGTTGTAGCATTTCGTGAGTTC 14986 29 100.0 32 ............................. GCATCCGTCTTTTCGCCGCATCTTCTCGACCA 14925 29 100.0 32 ............................. CCCCGCCCTCCTGCATCACGATCGCGCCCTCA 14864 29 100.0 32 ............................. GCCGCCTGGTCACCACATCTCAATCCGTCGCG 14803 29 100.0 32 ............................. ACGCTCATTTGTTATTGGGGTTGTCATGGTTA 14742 29 100.0 32 ............................. CACATAGCTATACACAAATAACAGATCAAAAC 14681 29 100.0 32 ............................. TTCAAAACGAAACACGGAATTAAATGTGATGG 14620 29 100.0 32 ............................. CCGTTGTTGGTGCTGTAGTAGAAAACGCAAAA 14559 29 100.0 32 ............................. GACGCTCGCAGGTTGTGTGCGTGGCCCCGCGC 14498 29 100.0 32 ............................. AATTCAGGTTCAAAATCGTCGATTTGTCGTAG 14437 29 100.0 32 ............................. TTTTTACACACCGGCTCACTGATTTTCGTCGA 14376 29 100.0 32 ............................. TCACCAAACAGGAGGGGGAAGGTGTTGGCGGA 14315 29 100.0 32 ............................. CTCAGGTCATTGATCGGTTAGACTGGATTGCA 14254 29 96.6 32 .............T............... TGAGCACCTTATCGGGTCGCCCATGCGTCATG 14193 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGCTATCTCCAGCCATCCCCGAACCTGAAACGTTAGGCGATAGCGGTCATCGAGGACGCGGCGGATGAGTATGATCGTAGTTGTAACGGAAAATGTTCCTCCACGTTTACGTGGACGGCTCGCTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCCTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAACTCCCAACTCCCATTTTCAACCCCATCAAGACGCCTTCGCCAACTCCTGCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCAGGATTGGTCGTCGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //