Array 1 5509-3779 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSXD01000007.1 Corynebacterium diphtheriae bv. mitis strain 5152 Contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5508 28 75.0 25 TCA..CA............A.....C.. GGCGGTCCAGTTCTCAAAGTCCCTG T [5483] Deletion [5456] 5454 28 85.7 33 ..........C...GAC........... CAATACATGAGGATTGACAGTGCTGATTATGAC 5393 28 96.4 33 ..........C................. ATACTGGGTGTGTCTCGTGGATCCGTTAACAAC 5332 28 96.4 33 ..........C................. AAGGGTAGCGTGCAGTCACGACAAAACCAAGGC 5271 28 96.4 33 ..........C................. GCTGGGGGAGATCAAAACCGCAGGGACGAACGG 5210 28 96.4 33 ..........C................. CTGGGGTCCCAGAGGGCGTCATCGCTCGTGTTG 5149 28 100.0 33 ............................ TTTTGAGCAACCCGCGCCGCGGCGCGGGCAAGG 5088 28 96.4 33 ..........C................. TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 5027 28 100.0 33 ............................ TAGCCATCATTCTCTCCTAGGGCCTCTGAAAGG 4966 28 100.0 33 ............................ TACGGGTCGACCTCACTGCTGGTCCTGTGGGCG 4905 28 100.0 33 ............................ ACGGGACCTATGCGGGCATTGATTACACCATCC 4844 28 100.0 33 ............................ ATTTGCGAAACCACCTCTATCTTCGGGACAGCG 4783 28 100.0 33 ............................ TGTTTTATTTTCCGCTCGTGCTTCAGCAACTAG 4722 28 100.0 34 ............................ CATAGGACTTCCCCTTCGAGTACATCCCCGCTGG 4660 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 4599 28 100.0 33 ............................ GATGCTTTTACGGATATCCTCAGCCGGATTGCC 4538 28 100.0 33 ............................ GGGTTTTCATTGCTTTTATGCTGGGTGTGGCTA 4477 28 100.0 33 ............................ TCTGTAGGATTCTGCCCCTTTTCGCAGAAACAG 4416 28 96.4 33 .....................A...... GCGCCGCTGTCGTCAAGGTCGGCGATGAGGGTG 4355 28 100.0 33 ............................ GGCCTGTGATCACGTAGAGCATTCCCCACCTCC 4294 28 100.0 33 ............................ CCGTTGAGCGAGTGCACGATGTCGGCCCATAGC 4233 28 100.0 33 ............................ AAACGGGACGCTGTGACGGCGGGGCAGCATTCT 4172 28 100.0 33 ............................ AAATACACAGTGGAACCGAATCCAAGATCGTGG 4111 28 100.0 33 ............................ ATCATGTGAAGGTGATGGTCGAATGAGTGCCGG 4050 28 100.0 33 ............................ AGCTCGGCAGCAAGCAGCGGTCATGGGTGCGAC 3989 28 100.0 33 ............................ TGTCATCGCGTCCTGCCTAGTCCGCTAACTTCG 3928 28 100.0 33 ............................ TTCATGGGTGTATCCCCTCCTTCCCCCATGAGG 3867 28 100.0 33 ............................ GCAGCGAGGCGAGGGCGATACCAGCACTTATTG 3806 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 29 28 97.9 33 GGCTCATCCCTGCTAGTGCGGGGAAAAC # Left flank : TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT # Right flank : ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCATCCCTGCTAGTGCGGGGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //