Array 1 310189-312029 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000001.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 310189 37 100.0 34 ..................................... TACTAACAAAGACCTTGAAGGAACTCCGCTCAAT 310260 37 100.0 35 ..................................... GAGACTTTCAATCTATGACATTGCACAAATACAAC 310332 37 100.0 36 ..................................... GGAATTCATTATCTCTTTCAGTTGCAAGTAGTTAAG 310405 37 100.0 35 ..................................... TTCTTGCCAATACCTTACTGTATATATGTTATAGT 310477 37 100.0 37 ..................................... TCTTACATCAGCAATAATTGAGTCAATGACAACCAAA 310551 37 100.0 33 ..................................... GATTAAGCATTATCTTAAGGAGGGTGCTGAATT 310621 37 100.0 36 ..................................... AAACTATTAACAAATTCAACCAACTTAACAAGAGCA 310694 37 100.0 32 ..................................... CGCGACAAAGTAAACGGAATCTTGTGCCGATT 310763 37 100.0 36 ..................................... CCACTAGGTTTTCAATTTCTGCACCATTTTCTAATG 310836 37 100.0 35 ..................................... ACGAAATGAGCCACCAATAGCACTGGCTTTTGAGT 310908 37 100.0 39 ..................................... ACGCTTACGTTGCACTCTATCAAGGTTGGAGTCCCAATA 310984 37 100.0 33 ..................................... GAGTAGTGCAATTTGCTCAGTGAAGAACTTTGC 311054 37 100.0 35 ..................................... TGATTTCGATGTATCTAATCTACTCCCATGTCAAC 311126 37 100.0 36 ..................................... GGTGTCGAACAGTACACGAATTTAACAACGACATGG 311199 37 100.0 33 ..................................... CCGCAGGAATCCCCGTTGCAGTACTACGAACGA 311269 37 100.0 32 ..................................... AATGACGACTGCTCAAATCAGAGAATATCTAG 311338 37 100.0 35 ..................................... AAAACTGACTTCAAGCTGAAGCGTACCAGTCCAAG 311410 37 100.0 36 ..................................... GTGGAAATCATGCCCCGCCTCATGTGCCGCAAGTGG 311483 37 100.0 42 ..................................... CTGAAGAGGAAAAAAGGGAATATGTGCTTAATGCGATCGCAA 311562 37 100.0 35 ..................................... CCTTTCGCCATAATTTTAGCATAATTCTATCCTAT 311634 37 100.0 37 ..................................... TTATGACTCAACCCATCTCTGTCAAATGCAAGCTTAT 311708 37 100.0 35 ..................................... AAAGCATACAAAGCAAGGAAAACTGCGCGATCGCA 311780 37 100.0 35 ..................................... TAATGGTCGTTAGAGTATCGCAGGTGCAGCAAATA 311852 37 100.0 35 ..................................... AGAATTATCAGAGTTTTCATCAGCAATTTCTACGC 311924 37 100.0 32 ..................................... ATTGCTGAGAACCGAAATTGGAACGCAAGCGA 311993 37 94.6 0 ...........................T....A.... | ========== ====== ====== ====== ===================================== ========================================== ================== 26 37 99.8 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCGATTCTTAAGTCTTACGGACAATGGATGCAACTGAGTGTGTTTGAGTGCGATGTCACTCCCACTCAGTATGCTAAACTGCGATCGCGTTTAGCTAAATTGATTAAACCCGATACCGATAGCGTGCGTTTTTATTTTCTCTGTGGCTGTTGTCAGCGAAAAGTCGAACGTATTGGCGGAGAACAGCCACGAGACGAAACAATTTTCTTTGCTGAGTCTCCTTCTAGCTAGGTTCCTGTATCTCAAATGCGCGGAAGGGTAGGTGTAGAAATTTCACAACCAGAAAAAAGTGCTTCTATCCCAACTCCAGTAAGGATTTCAAGCCATTAGTCGCCTAATCCTAATCCGCGCAACCTCTGAAATGCTTACCAAAATGCGATTTCAGCCTTTAAATTTTCCTGGCGCTCTTTCCAAACGAATTCTCTAATGCTATGATTGCCCTTGAATCGCGCAACCGTACCTTGAAAACTAAATACAGCTTGCCTTTCAGGCTCCCGCT # Right flank : CATTTACTTATAGGTGTTCGTTATTTACTGAACACCTGAAGAATTTAGTTAAGCTTCAGCAATATCTTTGTTAAGCCATCGCCTAACCGCTCAATAGATTCTTGCTGTTTCGGATCTTTTAACGTGCCATCAGCATTAAAGGCTTCATAAGCTTTGGATACTGCTACTTGGTCGGGAAGTACTAAAACTTTGATATTTCCCAAAATAGACCGCAGGTGAACCAACCCCCGCAAACCACCAAGAGCACCTGGAGAAGTACTCATAATCGTAGCAACTTTACCTGCAAAAGCAGCTAACGGTGCTTCGTTTGGTGCTGGACGGGATGCCCAGTCAATGGCATTCTTCAAAACTGCTGTGAGTGAACTATTATATTCCGGCGAAGCAATCAGCAATCCTTGATGAGAAATCATCAAGTCCTTAAAAGTGTGGGCGTTGGCTGGTAGTCCTTCTTGAGCTTCCAAGTCTTCATCATACAGAGGTAAAGGCAAATCGCGGAGGTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 331303-332167 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000002.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 331303 37 100.0 36 ..................................... TCCTCAATAGTTCCTCGTCCGCACTCACCTCCGCTT 331376 37 100.0 36 ..................................... ACCAGTAATAGGAATTAAAACGATGGAAATCTATTT 331449 37 100.0 37 ..................................... TTTATTTCTAAAATACTCTTGTTTATTAAAGAGGTGA 331523 37 100.0 36 ..................................... AGTTATTTATGTGCGATCGCTCTTGAATCTTAGATT 331596 37 100.0 40 ..................................... TGGCAGGTACTCGAAGTTGTTCTGGTATTCTTTTGTTAAG 331673 37 100.0 40 ..................................... ATTTTTTGGTGGTATCTTCGTGGAACACTTTATCAACTAT 331750 37 100.0 46 ..................................... ATGCGTAACTCTGGAGTTACAACAATCAATGTTACTATATCCAAGA 331833 37 100.0 36 ..................................... ATACTTTCAGATACTCTTGCAGCTTTTGAGCATCAA 331906 37 100.0 37 ..................................... ACGATGATTAACAGCATTGAGAATACTGTTTGTATAA 331980 37 97.3 36 ......................T.............. ATAAAGATTACATAAACATTGCAGATATAGTGGACA 332053 37 94.6 36 .........A..........................T ACTTCCTTGGTATCGCTCCAAAGGTCAGAATTTTTC 332126 37 78.4 0 .........A.T.........C....TTC..A....T | A,A,GCG [332147,332158,332162] ========== ====== ====== ====== ===================================== ============================================== ================== 12 37 97.5 38 GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Left flank : TTATTTGATTATTTATGATCTGCCTGATAACAAGGCTGCAAATAAACGTCGCACTCGCTTACATAAAATGTTGTCTGGTTACGGGAAATGGACACAGTACAGCGTTTTTGAGTGTTTTTTAACAGCAGTACAATTTGCTACCCTTCAAACCAAGATAGAAAAACTGGTTAAGCCTGAACAGGATTCGGTTCGATTGTATATACTTGATGCGGGTGCAATCAAACGAACAATTACATACGGGTCTGAAATTCCTCGACAAGAAGAAACAATAGTCTTATGATTATGTAATCAGCTTGATGATTGGCAAGTCGAAGCGGGGGCTAAAACTCTGGGGGATCTGCCAAAATCGCCAGAACCTTGACAAGTAAATAATTACAGCGTTTCAATACTTCGGGAAGTTGCAAATTAGTTGCAATAAGAGCGGCTGAAAATGACCTTTTTTTTCGATCCGTCAAAAACCTTCCCAGGAAGCCTGTTCTGTAACAGTTTCAGACTGGGCG # Right flank : TTACTAGCTGTTTGGCTCTTGTTAAGTCAAAGAGGATGGAAATTGCGTACAATATTGAGCATTATTTTAAAGCCATAAGTAATGCCAAGAGCAGCTACATCTACTAGTCGTAAACCAAAGCCAAAGCAAAAATCTGTTGCTTCTGTTGTGACATGGGCAGATGAGACAGAATTGGTTGGATTAGTGTTTGAACTGGAGTCAACTGCTTCTGCTTTGCTTTACTCGCAGTACACGATTGGGCTGCACGCGTGGTTTTTGGAGCAGGTGCGGCAATTTGATCCAGACCTTTCAGCTTATCTTCATGATGGAGAGTCAGAAAAACCCTTCAATATTTCAGCGCTGTCAGGTCAACTAGTCGCCAGTGGCAAACAACTACGATTAGAAGCGAATCAAATATACTACTGGCACGTGAACGCTTTATCTCAACGGGTAGCACAGTTTCTCAAACACTGGTTAACTCAACTACCAGAAAGGTTAGATTTAAAAGGTGCATCTCTACA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAAAGCCTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 333661-334519 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000002.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold2, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 333661 37 100.0 36 ..................................... CTTTCTTTAAATCATCAAAATTATTAATTGTGTTAC 333734 37 100.0 39 ..................................... ATGATTCAGATTTCTTTTTAAAGCCCACTCCCGGCACGG 333810 37 100.0 38 ..................................... ATTTTCCATAATTTTGCTCATCTCGTCCCAAACATAGG 333885 37 100.0 36 ..................................... CGGACGCATAGCTACCAATGAGGGTTGGCGAATGGG 333958 37 100.0 36 ..................................... CTTAAAACTTACAGCTAGCGATCGCAGTCTTTTTTT 334031 37 100.0 37 ..................................... TGCCCATGCCATCCTTGCGCTCCCACACTGCACTGAT 334105 37 100.0 36 ..................................... ACGAAGATAAACCATTTACTCTTAAAGCTTACCCAG 334178 37 100.0 41 ..................................... AGTTTAGCGGCTACCTCTGGGAAGTGTCCCCGCCGATTAAG 334256 37 100.0 36 ..................................... AAATATTGTGTATGCCTGCTTGGTTTATTTCCCGAA 334329 37 100.0 35 ..................................... AGGCAATTACTAAAGCTTGTAGTTCTGCATCTCCG 334401 37 100.0 45 ..................................... ATTGATGATGATATTGATTTAGGAATACTTGAGGATTCAGGTAAA 334483 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 12 37 100.0 38 GTTTCCGATAACCAAATCCCCTCACGGGGACTGAAAC # Left flank : TAACAAATCTGCTGGGAGAGCGAATTGGGGAACTGATAAAATTATTCACTGCACAACGCAAACGCACAGGAGGGGAGCGAACTGATAAAATTGCTGTTACCTGGGCAACGATTTTGGCGCGGCGGGAGATGGGAGAATCAATCAAGGCAATCGCTGAAGATTTAGAGATGCCGATCTCGACCGTGAAAACTTACGTGAAATTAGCCAGAAAATCGCTCAAACAAGAAAGCAATAGTTGAAAATCTTTGCTTATGGACAAGCATAGGTAATTGTCTTATGATTAGATAATCAGCTTGATGTTTGGCAAATCGAAGCGGGGTCTAAAACCCTGGGGGTTCTGCCAAAATCGCCAGAACCTAGACAATTAAATACTTACAGCGTTTAAACAATTGGGAAAGTTGCAAGTAATTTGCAATAAGAACGGTTGAAAATGACCTTTTTTTTCGATCTGCCAAAAAGCTTCCCAGAAACCATGCTCCATAACAGTTTCAGATGGAGCG # Right flank : CACTTGAAAACTAGTTTTCATTAAAGAAATTGCGATCGCTTTTGGGTCAACACCGTAGTTGTGGTACAAATCGAGAGTATCAACGATTGGATTTGACTACATAGCTCCTGGTAGCTACTCATACGTAAAAAGTTGAACATTGTTGCAATTAAGGCATTTACGCGCCCGTAGCTTTTCGCCTTCTCCCCACCCAGCCCCATCAGCACGGAAATATACCCACTGACTTACTGATTCTCCAACGGTACGACCCCAAACAAAATTTTGTGAGCCGCAGATAGGACATGGCGTTTCTTGTAGACTAAGGTTTTTGTGATTTGGTTGGTTATTCATGAGCTTCCCGCGATAACTTCTGAGTGCAATCTTCAGGAGGCATTGCGCCAGAGTGCGATCGCCCCTTTGTTCCTCTAAGAAACTGGAACTGGGGGGCGTAGTTTAGCACCGCAGGAATCGCTTAATCTGCTGCATGAGAGATACCACTTTGATGTTTCTATTTTTATTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCGATAACCAAATCCCCTCACGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 3 529151-527752 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000002.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 529150 37 100.0 34 ..................................... ACGAACAAGAAGGCTTCAAAGATAAGCACCTTGA 529079 37 100.0 33 ..................................... CCACACGTCATCCCATGCCAATCTACGAAATTT 529009 37 100.0 33 ..................................... AGCGCTGCACGTCGGGCATCTTGCGCTATCAAT 528939 37 100.0 33 ..................................... ATAGTTGCGCCCAGAACCAAACTACCAACCATC 528869 37 100.0 35 ..................................... TCGTCTCGATAGTAAGGCAGGACATTGCATTTTAA 528797 37 100.0 34 ..................................... CGGTGACAGATTTGTAACTAATGGATTCAGGGAC 528726 37 100.0 41 ..................................... ACAGGGTATACACTGCTCTTAGTATTCCCGTTTATTCTCAG 528648 37 100.0 32 ..................................... GCTGCGATTGAGTTATCAATTCCCCTAATTGC 528579 37 100.0 30 ..................................... AGCGAGTCGCTGTGCATCCTCCTGTAACAG 528512 37 100.0 34 ..................................... TTGCTTTTAAAACAGCAATTCCTCGACTATATAA 528441 37 100.0 38 ..................................... CAATCGTTGGGCAACGGACACTTTTTATATTTGGATCG 528366 37 100.0 34 ..................................... CCATTGCACTAGTGCGATCGCTTAGTTTACAAGG 528295 37 100.0 35 ..................................... ACAAAGTAAAAAACGCTTAAAGGAAATATGAGAGA 528223 37 100.0 36 ..................................... AAAATTTAATGTATCAGCAAAACTAAACTTTAAATT 528150 37 100.0 34 ..................................... TCGAGCGATCGCACCACACAGCTTAAACCTTGTC 528079 37 100.0 34 ..................................... GGGTAAATTTCAAATTCTGGCTTTTCAACTTCAA 528008 37 100.0 35 ..................................... TCAGCAAGTCTATTTAAACCCGCTAGTACTAGAGA 527936 37 100.0 35 ..................................... ATCACGCATAGGCTTATTTGCTACTGCATCTCTAT 527864 37 100.0 39 ..................................... TTAGTAGCTTGCCCCTTCCGGTTCCCATATTTCTACTGG 527788 37 94.6 0 ........................C........G... | ========== ====== ====== ====== ===================================== ========================================= ================== 20 37 99.7 35 ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : GGTTCTGATTAAAACAGCTTTTAGAGAATTTGCTTATGCAATAACAGACTTTGAAGACGTTGACAAATAAGGTTAGTCATGGGGATGCTGGAATTGCGTAAGCCTAGGCATCACCCTAAAGTCGGCCTTTTCTTCCCAAATACACGCCAAACCCACATAGATGCTGGAATTGCGTAAGCCTAGGCATCACCCTAAAGTCGGCTGACCTAATCGAGTAGGATATATGTAAGTAAACAGAAACAGCTTTCCAATCAGATTAGTTTTTTCGCTCAATGCGCGGATGGGTAGGTGTTGGCGAAGGGGTGAATACAAAAATAGCTGAATTGCCGTATATGCAAGGATTTGAGGGCTGTAGTATCTTGAAACCATCCGCGCACCTTATGTAGACTGACTTTCAGCTATTTACAGTTAGCACAATTGCTACTCCTTATGTTATGATTTTTGCATTCGCGCTATTGAACCTTGAAAATCAAATAACACAAGCCTTTCAGACGACTGCG # Right flank : GAAGTCTACTGAGAGCTATCCTGTAAAAGATAGTATCAAAAAGTACAAATATTACCTCAAGAGTCATTCCACATCCAGCTTGAGGGCTGTGATATTATAGGAGACTGCTGCATACATTTTAGAAAAACTAGAAACTGAATCGACCATGGCCCTCACGCAACTGCGGAAACAAGAAATAATCTCCAACTACCAAGTTCACGAAACTGACACTGGCTCGGCCGATGTCCAAGTTGCGATGCTAACTGAGCGCATTAACCGCCTCAGCGAACATCTCCAGGCAAATAAAAAAGACCATTCTTCTCGGCGGGGACTGTTGAAGCTAATCGGTCAGCGCAAGCGTCTTCTAGCTTATATATCGCAAGAAAGCCGGGAAAAATATCTAGCTTTGATTGCTCGTCTCGGTATTCGTGGATAGGACTACCGCTTATGTCTGCTGAAGAATCTGAACGCAGTCGTTTGCCCTTTGAACCGAACAAAAAGCGCCAAAAACCCGCAAAAAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 4 948480-948945 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000002.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 948480 36 100.0 35 .................................... GTTTTGAAACTGCCTATTGCTCCTAGAGCAGAATT 948551 36 100.0 36 .................................... TGTCCACAAAATGATATCCCGGTCTGTTTTAGGGAA 948623 36 100.0 39 .................................... CACATTTCCTGAGTTGCTGCCTGAAGCAAAAAAGTACCC 948698 36 100.0 35 .................................... TGCTTTATCCCTTGGCTATCGTGCCGAGTAAAAGA 948769 36 97.2 35 .......................T............ TCGTTGAAAAAGATGAATCGCTTGCTAGCGATCGC 948840 36 100.0 34 .................................... CGCAACCAAAGAAACAGCCCGACTCAGAGAAGAG 948910 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 7 36 99.6 36 TTGAGCAACGCCTAACGGCATAAAGCCACGACTCAC # Left flank : CTCATCTAAAGATAATTTGGATACCAGAATTAGAAACCGCATCAAACAAGTTGCTCAGTCGCTAATTGAAGCCGTGAAATCACAATTACACCAACTAGAAAACTGGCGGGATAAGGAATCTACAAGAGCCACAATTAAGAGTTTTATTTATGATTACTTGTACAGCGAAGACACAGGTTTACCTGTAGATGCCTACGATGATAGCGATGTAGACAACCTGAGTAATATAGTATTTATCCATATTTATCAGCAGTATAAAAGTGCTAATAAACATCCTTATGCAGCGTAATAGTACTTAATATTACTCCCTAAAGCGTTTGAGGTTTTGGTGTAAGACTTCGTGAATGCGTTGGCGTAGCCCGCCGCAGGCATCGCACCAAAAAGGAAGTCTGCCCCTGACAAAGAGCTTCTAGCGCTACTTGCTTGTCAAACTCTGCCAATTGCAAAGGTTGTTCAGGCGATCGCCTGGCTAATAACATTAGCCGCTTCATGTTGCAAGA # Right flank : CAGCAAAGGCTAAAACCCTTGAGTGATGAAGGCTCACTCACAATTTTACAAGTACCCCTCAGCCAGAGATCCCAAAAAGACAAAACTTATCAATTTATTGTATTTCTTCAACCTCTACAACTCAATCCCCCTAACTCTTTCAAGGATTTGCAAGCACCTTTTTCTTTATCTAAATTGCTATATCCCTTAACCCTGTAATCCTTTCCGTCATTTTTTACCTCGATTCTCCTCGCCAGCAGGGGTACTTGTCAAATCGGAGATTGAACCATTGTCCAGGCTAAATCAGGAGGTGATAATCTATCCATTTCCTCAATCCGATACCTCAAAAATCGGGTATTTCTTGACCCCACATGGTCAACCCAATAGGGTAAAGTTAACCTGCCTCGATTATCTCTAATCGCCCACTGTCTCACTCCCTCTAGATAATCTTCCCTTGCAAGTTTGATCGTTTTAATCAACTGGTCACTTTCTCCCAAAAATAAACAACCAAACCGTCTTAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAGCAACGCCTAACGGCATAAAGCCACGACTCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 358601-361068 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000003.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 358601 37 100.0 34 ..................................... GAAACATTGATGCCCAATACTACAAAGTTAGAGA 358672 37 100.0 36 ..................................... ACAACAGGAACAACCTTTAGTATTAACGATAATAAG 358745 37 100.0 34 ..................................... ACTTATATATATAAGACGACAATACCACTACTGA 358816 37 100.0 34 ..................................... ACAAGGGTACAAAGGCAAGGAGTACTGGGAATAC 358887 37 100.0 35 ..................................... GTTCACGTACCTGAGACAACGCCCTTTCCTCCATC 358959 37 100.0 34 ..................................... TTATTGTAATATTCCAGATATTAACATCAAGAAA 359030 37 100.0 38 ..................................... TCGCCAGAGGAAGTAAAAAGAGCAATTAATTCTATAAA 359105 37 100.0 35 ..................................... GATCCAGTGAAAGACAAATCTGCAACCGGGAATAG 359177 37 100.0 36 ..................................... TTGCCCGTGGTGTGGTGATCCTAGTTGCCCTGCCAA 359250 37 100.0 33 ..................................... AGTACCTTGCCTAGCATTATCTAAAAGCACATC 359320 37 100.0 35 ..................................... TTGTTGCTCCACACAGCAAGGTGCTTGTTGGTTGC 359392 37 100.0 33 ..................................... TTTTCGCGGTAGCTCAGAATGAATTCGTTAGGC 359462 37 100.0 34 ..................................... TTTTAGGGAATTATTTATTAGCAGATACAAATGG 359533 37 100.0 35 ..................................... AAGCTAACAACCACATTAAAATCATCAGCATTTAG 359605 37 100.0 32 ..................................... AAGCTATTCTCTTCTTCTTTCTGTTTGGCAAG 359674 37 100.0 35 ..................................... TTAATTGCCGATAAGCAAACCGCATATTCTCAGGT 359746 37 100.0 33 ..................................... TCACTGGAACTGTGAGTGCGATCGCCGCCTTTA 359816 37 100.0 34 ..................................... ATATTTGGGGTGTTGGATTGCCTGACATGACAAG 359887 37 100.0 33 ..................................... TTCTATCAAGAACCGATGGAGCATGGCGGAACT 359957 37 100.0 35 ..................................... TTGGCATTGGCATTTGGCAAGATGCGATCGCAATC 360029 37 100.0 34 ..................................... CGTATTCTAAAAGTTTCTGCTGATACGCCGGATC 360100 37 100.0 34 ..................................... AGTTTTTGTCACTTGCGACTCAAAAACCTTGCAA 360171 37 100.0 33 ..................................... TCTCCTGAACTACTAAATCACCTTGATACTGAA 360241 37 100.0 36 ..................................... TGAGGCGGCGCTTTCTCGGCAGGCGATCTTTGCCGC 360314 37 100.0 33 ..................................... CCCGCAATGAAGCAACCGCACCTTCAGAATCAA 360384 37 100.0 38 ..................................... TCAGTATCTAAAATTACCCAGTTATCCTCTTGAATAAA 360459 37 100.0 31 ..................................... GGGCTTTACCGTACCACCAGCCGCATAACAG 360527 37 100.0 35 ..................................... AGGAGAACGCGATCAGGTGTTAAATGAAGCTCTCA 360599 37 100.0 36 ..................................... CCCAAAGCCAACTGAAAACACTAATTCCTTCCTCTT 360672 37 100.0 39 ..................................... TAATTACACTGACGACTTTGGGACAATTTATGCACTCTA 360748 37 100.0 34 ..................................... TTGCCCTTCGTCGTCAGTTAGGTAATGTTCGTGG 360819 37 100.0 34 ..................................... ACAAAGAATTTAAAAACTCTTCCCCATTCCTAAA 360890 37 100.0 33 ..................................... AAAACTATACCATAACTTCCACCAACGCGATCC 360960 37 100.0 35 ..................................... GGCTGATTCAGTGATAGCAAGTAACGCTTGTTTAC 361032 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 35 37 100.0 35 ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : CCGGACATAGCAGTTCTACTGAACGCATTCTGCAAAATTTACACGAATTGTTAGAGCGATCGCTCGGACACCCTTATACTTTGAAGGTGATTGATGTTTTAAGTCATCCAGAACAAGCAGAACTGAATCAGGTTTCTGCAACTCCTACCCTTGTCAAGGTTTGGCCTCACCCAATTCGGCGCATCGTTGGAGAGTTGGATCATGTAGAAAAGATTTTACAGATGTTGGCTGCTAAGGAAAAATTTTAAGTAATCAAACTAGTTTTTTGCCAAGTGCGCGAATGGGTAGGTGTTGGTGAAGGGGGAACTACAAAAATGGCTAGATTGCCTTATCTGCAAGAATTTGAGAGCTTTAGCATCTTGAAACCATCCGCGCACCTGATATAAACTGACTTCCAGCTATTTACAGCTATCACAATTGCCAGTCCTTATGTTATGATTTTCGCATTCGCGCTATTGAACCTTGAAAACCAAATAACACAAGCCTTTCAGACGCCTGCG # Right flank : CCTTTAAGTACACGACTTCGAGCGGTACTGCTTAAATCCAAAGAAAGCCAGCTATATTTAAGTTCATAGGAGAGCATTTGACAAATAATTTGTCGCTCCACAACTAATCGGGATGACTGGATTCGAACCAGCGGCCCCTTCGTCCCGAACGAAGTGCGCTACCAAGCTGCGCCACATCCCGCCATAAAAATGGCATTGTAAATCAAGAATATCATAATCTGTGCCAAATAGCAGAATTACATCTATATGCGATCGCTTCACCAAAGACTTTGCTTGCTAGGATTAAATTTGTATAACTCTAGTGGTAAAAGCGGATTGTGACTGTAAAACCAGACTGGTTGCGGGTGAAAGCACCTCAGCTTGAGCGCATCGGTAACGTTAAAGATATTTTGCGGGATTTAGCCCTCAATACAGTTTGCGAGGAAGCGTCCTGTCCGAATATTGGTGAATGCTTCAATGCTGGGACTGCTACGTTTTTGATTATGGGCCCGGCTTGTACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCAATCAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 647483-646501 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000006.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 647482 37 100.0 33 ..................................... GCAGGAACTCCAACAGTTCATCCCAGCGCTTGC 647412 37 100.0 34 ..................................... CGCTACTCAAGTGTCATTGCAGTATTACTCGCTA 647341 37 100.0 37 ..................................... CGAGCAAAACAAGTGCATTATACATAATCGTGATTCC 647267 37 100.0 36 ..................................... TACTCGAAGCACTCATTGCACAAATCCGTTGGGGGC 647194 37 100.0 38 ..................................... TTCACAATCTCGATTCCACTGGAAAAAGCTTACAAAAT 647119 37 100.0 35 ..................................... ATAACCACAACACCGGGAAGAATTCTAATCATCAA 647047 37 100.0 36 ..................................... TGTAGGATTGTTTTTTGTGATTTAGTCATGGGTAAG 646974 37 100.0 37 ..................................... GGATTTGAGAAGGATTAGGATTATGCAAAAACAACAG 646900 37 100.0 35 ..................................... TTTTCTTTAGAACAAAGCCATTTTTATTGATGGTA 646828 37 100.0 38 ..................................... AAACCTGTTCCCGATGCGGACACATTCACCCTGTCAAG 646753 37 100.0 37 ..................................... ATTACCTGCGACTGAAGTAAATTGATGTTGGTCTACG 646679 37 100.0 34 ..................................... TCAAAAGGCTGGAGTGCAGAGCAACTATCATCAT 646608 37 100.0 34 ..................................... CGCCACGGGGCATTTTGGGATATCACACCACCAT 646537 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 100.0 36 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : AGCGCGTGGCCCAAAACCCGTTAAACCTCCAGCCCCCAAAGTTCAAACAGAAGAACTTGAAACCGAATCAGAATCTATCTCTGAGGAGCCTCAAGACTAACATTACAAGTGTTGTTGTGTGTGATGTGGGAGGCTATAAGCATATTAAAGACTGGGATTTCTGGCTCCGAAGGCAGCGATCGCGCCCCCCATCACCATTAGATTATTTTTAGCGATCGCATCTCTCACAGAATTTCTGTATGTCAAATGCGCGAATGGGTAGGTGTACAAATTCCACAGCCACAAAAAAGTGCTTCTATCTCAATACCAGTAAGCATTTCACCCCACTCACCACCCAATTATCATCCGCGCAATCTCTGAAATGCTTACAAAAACTAGGGTGTCAGCCTTTAACTTTTATCGGCACTCTTCCCAAAGGAATTCTCTAATGCTATGATTGCTCCAGAATCGCGCAACCGCACCTTGAAAACTAAATACAGCTTGGCTTTCACGCTCCCGCT # Right flank : AAGCCATGAATCTGAAGCAATTTGCAGAACTGCAATTGCAATTCATCTTTAGTCCAATTCATATTTGGTATTTATTGTCAATACATAAAACCTAAAATATATATTGCAGAAATCAATTTGCTTAATTTACAACATCTCAGTACAGTAAATTTAAAAGCAGTTTGAAGGTCATAAAAGTTTCACAGCAAGTAAATCGATACTTGCCCTCCGAAAATCAAGCTACGTGAAAAAATCTAAAATCCAAAATTGATTGGCATAAATAATGGAGATAGAACAAAACGATCAATTTGTAACCGTGGTCATTACACAACTTGTCAAACCGGGATGTGAAACTGCCTACGAAGCTTGGTTGAAAGAGATTACCAGGGTTTCCAGAACTTACGTGGGTCACATGGGAACAAATGTGATTTGCCCCCAACTTGGGGTGCGAAATGAATATGTGATTATCTTCCGATTTGACAGTTATGAAAATTTAGAAGTGTGGATGACATCGCGCGATC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 594873-592808 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000005.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 594872 37 100.0 34 ..................................... TTAAAGTGGATGGTTGAGTTACTTAGATAGATCA 594801 37 100.0 35 ..................................... TTAAGGACATCCAATGCAAAGCAGCGCTAGTAGAC 594729 37 100.0 33 ..................................... ATCCCACAACTGGACTTTGCGAATTGACTCCGA 594659 37 100.0 39 ..................................... ATAATCGCCAAGACTTTAGGAGAAGCTCTAGCGGATGCA 594583 37 100.0 31 ..................................... TTGTCCGCTGATTTACATCATCGGGATATTC 594515 37 100.0 34 ..................................... AAAGCATACATACAGCAGAGCGAATAACCAGGGT 594444 37 100.0 35 ..................................... ATCCAAGCCCAGCCAGTCAGCGAAAAGATGTTTTG 594372 37 100.0 34 ..................................... AGGTAAATCCCAGATAGACTTACCACCTACTCGT 594301 37 100.0 33 ..................................... ATAAATCTAGTATCCACGCCGGAAGGCGGCTTG 594231 37 100.0 35 ..................................... GATTGCAACCCATTGCCCAACGGCGAAGTGAGAGG 594159 37 100.0 40 ..................................... GTTGCAATCCATTGCCCTGCGATTCTGGGGGAGCCGTCAA 594082 37 100.0 35 ..................................... ATTAAAAGCAAAAATCAAGAAGTTGAACGAGCAAG 594010 37 100.0 39 ..................................... AATTCTTCTCTTATTGATTCTGTGATCATACTTTCTTGA 593934 37 100.0 37 ..................................... GAATGCTTCTGGACACCGGATGCGATCGCTGATGAAA 593860 37 100.0 35 ..................................... GAAAAGCCCGACGGTTCACAATCTTACTCTCGCAG 593788 37 100.0 36 ..................................... ACTGATACACTTGCCACTACAGCCAGTACCACCGCA 593715 37 100.0 36 ..................................... AACAATTCCTGCCTAGAAGTAACACGAGATTTACCA 593642 37 100.0 32 ..................................... ATACAACTCTTTACGAGTAGAAGCAAGGGCTA 593573 37 100.0 35 ..................................... TTACTGTATTCCTCTATCCACTCAGGGATCATGCG 593501 37 100.0 36 ..................................... ATCAGAACTACCTACAATCTGACCATCAAAAACTAG 593428 37 100.0 34 ..................................... TCATCTGAGAGTTTTTTAATGTGCATCTTAATGG 593357 37 100.0 36 ..................................... TCAGAAACAATCAGGAACATCTTAAATCTTTCTAAC 593284 37 100.0 37 ..................................... AATGTACCCAATGATGAACTCGCATGAAACGAAACCC 593210 37 100.0 42 ..................................... GTAGCCTTAGAAATTTGTCGGATTTTGCTGATGATTCAAAAA 593131 37 100.0 36 ..................................... AATCAAATTAACAATGCTAAAAACGACCAGGAAAGA 593058 37 100.0 33 ..................................... AGGGGACTTAACTACTGGGCAATTTAACCAACT 592988 37 100.0 35 ..................................... CATAATGACGGTATGATAATTATTGAGGGACGATA 592916 37 100.0 35 ..................................... ATGCTGCTTTTTACCCAAAGAGCGGAAAAGTATTT 592844 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ========================================== ================== 29 37 99.9 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : AAATTTTCACCAGTAGCTGGTGCTGCTCTATAGGCAGGAATTTCGCCATCTTTGACGGGAATTTTCACTGCACCAGCTACTAAGCCCTTGGCATCAGTAGTGATGACTCCAGCAGAAATGGGTTGTACTGCGAGGGCAAAACCTGTCGCCACTGTAGCTGTTGCAATAAATTTGCGGCGCGTTATTTCTTTCATCATCTCTACGTTGAATTACTAAGTTCCCTTATATTTAGGTTACTGTATGGTCAAATGCGCGGAGGGGTAGGTGTACAAATTTCATACCCGAAAAAAAGTGCTTCTATCTCAACACCAGCAAGCGTTTCACCCCACTAATTATCCAAATTCATCCGCGCAATCTCTGAAATGCTTACAGTAATTAGGTTTCAGCCTTCAACTTTTCCCAACACTCTTTCCAAACGAATTCTCTAATGCTATGATCACTTTAGATTCGCGCAACCGCACCTTGAAAACTAAATATAGCTTGGCTTTCAGGCTCCTGCT # Right flank : AATCAAGTAAAGTTAGTATCAATACTAGACAAATAGCGATAGCCTTATTTTTCCCGATTTATCCAATCTTCTCCACCAGCTAACTGACTGAGATAATCATCCATAACCGCTGGTAATTCCTTTGATGAATAAGTATATGTTAAAGCTAGTAAACTAGTAGTTGTAATTAAAATCTGGCTTTTATCTAGCATTGCTGACAACTGAGAACGAGTAAATTTANCCATTCATTACTTCCTCGCTAGCATCTGCGATCGCATCTTCAATTACTTCCTCTTCTATCAAATTCTCCCATTCGCCTAAATTAATGTAATAAGATGTTTTATTATCTTTGATATTCAGCTTTTTAATTTCTCGGATGGAATTACGAATAGAATTTGCCCATGAACCAGTTAATCGTTGCTCTACTTGGTTCTTAATCAAATGAATCAGCAGAATGTTTAAATAAGTTTGGATATTTCGTAAAATAGCTTGTTTACTCATGCCTTCTAATTCATCAACAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 351159-351559 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOLJ01000008.1 Nostoc sp. 'Peltigera membranacea cyanobiont' 210A scaffold8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 351159 35 88.9 38 ............A.......-..........A...T ATTGCACAATATAGCGACGCGGTACTCGGAATTGAACG 351232 36 97.2 36 ...............................A.... AGTAGTAGACATGATACTCAACTGTGAGTGTGGCGC 351304 36 91.7 38 ........................C.....GA.... TACAAAGAGTGGATCGACACGGCAATTAAGCTTCAAGG 351378 36 94.4 37 ..............................GA.... CTTACGTATCAAAAATTGCTCCAATTATTTCACGTTT 351451 36 100.0 37 .................................... TCAAAAAACTAAAGAAATGTTTCCCTTGATTATAGAA 351524 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 95.4 37 GTTTCCATCCCCGTGAGGGGTAAGTGATTGAGAAAC # Left flank : ATAAGATTGGGTACGGTCTTGTTTTATCGTCAACTCGTCAAGGTGAAATTGGGTACGATCTTGTTTTATCGTCAACTCGTCAAGCCGCCTGCTTGATGATTCTGCGTAGCTAGCAGTAGACACTAGCAATCGCTTAACGGTTTCGAGTTCATCTTCTACATGGTCTAGTCGCTGTGAGTTGGTCATGCTGTTTTTTCTTGGCTAGCTTCTTTATCTTCTGCGATCGCCTTATCGCCTTCCTAAGAATAACTTTTGTGAGTTGTGGTACGCTTAAAAATTCTCTTGCCGCCCATCGTTATCCCCATCTTTATAATACATTTGTGTCTCGCTGTCTTTTACCTTATCAGGATGAAAGATTTCAGCTAATCTCAGAAATGTCTGACGAGTTTTTCTTGATTCATCTGTTCTGGGTAAAGATGGAGATTCTACAGACTGTGTTAATTAAAATATTGATTTTTTAGAGTTGACTTGATTTATCTATTCAACCACATCATAGTCAA # Right flank : CCCCACCCTTCTAGAACCCTTACTGTGACTGGTCTTCAAGGGTCATTTTCGAGGGGGTCTAATTTAATTGTCAATAAGCCTAGATTATTGACAAAAATGTAACTGCACATCCGCTCAAACGCTTACACAGCAGCTTTTCGAGGGGGTCAACGAAAGAATCAGGGTTTGAGCGGTCGCTATACCCCCGCGAAAAACTTACGTGTGTAAAGTCAAAATAAATACTTTTGCTTTCACTAAGAAACTTGGTATTGAATTGTCAAGGTTCTGTTATTAATGGGCATGAACATAACATATTACTGTTGACTTGTCAAGTCGGCACTAATTCACCAGGACGCAATTTCGACCACTTACCCGTTTCCCGCTTGAAGCTCAGACAACCAACAACATCCCATTCCATTTCAATCACATCATCTGTAGTCCGAATATTGACATTGATAGAAGGTTCATTCGGATCAAAATCTGGTGTTTCAGTCAAGTGAGGCTGTTGGTGCTGCCCTTCT # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTGAGGGGTAAGTGATTGAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //