Array 1 2304483-2303198 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013251.1 Endozoicomonas montiporae CL-33 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2304482 36 100.0 34 .................................... GTTCAATAACTTAGCTAACATATTCGCCTTGTAG 2304412 36 97.2 33 ......A............................. GACAATCTGGCTCGCCTTCGTCGTGTGATTTTA 2304343 36 100.0 34 .................................... ATTTGGACATGCATGTCTCCTTATCTAGTTAAAA 2304273 36 100.0 33 .................................... TTCTGCATTTTCTTCAGGGACAGCGATATTGAA 2304204 36 100.0 32 .................................... CCGTCAGTGTTCTCCGACCCCCAAGGCAGTGA 2304136 36 100.0 33 .................................... GCGGTAAATCCGGTTGTATTCGTCCAGCTCCGC 2304067 36 100.0 33 .................................... GCGGTAAATCCGGTTGTATTCGTCCAGCTCCGC 2303998 36 100.0 32 .................................... CATAACAAATGCTTCCAGCGGACGTGCCTTGC 2303930 36 100.0 35 .................................... GTTTTAGATTCGTGCATAAGCACTTCCAATCTAAA 2303859 36 100.0 34 .................................... TTCCTCACCGCCCCGGACGCAAGACGGTCAGTGC 2303789 36 100.0 35 .................................... GACGCGGGACTGAACGAAGACGTTGCCACCGCAAT 2303718 36 100.0 38 .................................... GTCGCTGTCCTTGCTGCCTTAAACTGCAAAGGATTATT 2303644 36 100.0 33 .................................... TGCATAAGCACCTCCAATCTAAAGTTAAAAGAA 2303575 36 97.2 32 ..................................T. TCGACCGAACAGTGGCGTGGGTTCTTTCAACC 2303507 36 100.0 33 .................................... TCCTGCCGTGGTTCCGGTTTAACGGCATTCAGT 2303438 36 97.2 32 ............................G....... ACTGCTTCAGACTTGAAGCAGGCAAAGTCTTT 2303370 36 100.0 32 .................................... CATGGTGATCGCTGCAACGGGGTTCGGTGTCT 2303302 36 100.0 33 .................................... CTGCTCAACTCTCTGTTGAGTACCTGCAAAATC 2303233 36 88.9 0 ..C.............A..........C.......T | ========== ====== ====== ====== ==================================== ====================================== ================== 19 36 99.0 33 GTTCCGGAACTTCCCTGACTTTGAAGGGATTAAGAC # Left flank : GTGTTGACGACTTTATTCGGTCACGCCGTGGACAACACTGGCTTTCACTCATTGGTGACCATGAAGGCGGAGAAGGTTTTTATCCCATAATACGGAGTTTGACAGCCAGCGCCGCCCGGTTCTGTGGAATGTCATTAGACAAAAACCGTTTGAAAAACATTGTCCGTCAGCACGTCTGGCATAGCGACTCGTCCGGTCACAGTGATGATTATCTGAAAGAGATACTGACTGACCGGTCACTGGACTGCCTGATAGAAGGCGCTGTTCGTAAGTTTTCAACATTCTGAGAACCCTAAGAATGTAACTCATTCAATTTACGGAATCACAAACACCCCGTTTGAGTGCTTTCATGTTATGCTGAACCAGCAGCGGAAGGGGGCAACCCCGCCACCAGGAGAAGAACACCTATGAAAAACCGGCACTTTTTGCTGTATATAACAACAGTAGTGGGCAGCCCCCTTTGCAACCCCATGAATTTAAAGTACTATTTTGGCGGTGGA # Right flank : CAAAGGACACCCTGTATAAAGAGTTAGACTCTGTTCCAAAACGCCCCTAATCTTTTCCATACACATTCAATCAAGCTGCTCATATTCGGTCAAAAAAACGTCAGATCTATCAGTCATTATATTAATTCCGTCGTATATTAAACCGAGGGATTTACAAGCAGATGGCTAGCTGCCAAAATTCCGTTATTACAAAAATAATGAGATAGGGAAGCTCTGTGATGTCCACAGGAAGTCAACAAAAATTAGTCTGGTGGGATATAGCCAAGTTCAGAGAAACCGGTGCCAGAAAATTACCACTTTTTCACGGGCTGGTTTATCTGATCATAGCCCTGCTCACCTGGGCTCTGGTCTTTTTCTTGTTTTTAGTACCCAAATTACTAAAAGGCGAATTTGGAGATTCGTTAGCAACTGGCTTTTTCATCACTCTATTCGGGTTTATTATTTTCGCCTATGGGTATCTCTCAGAAACTTACGACCTGATAAAGAAAAACAACCTGAAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGAACTTCCCTGACTTTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2309545-2308620 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013251.1 Endozoicomonas montiporae CL-33 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 2309544 36 100.0 33 .................................... CTAGTTTAACAGTTCCTTTAGAAGACACTAGCG 2309475 36 100.0 34 .................................... TGGGCGAACTGGCCGCAACACGAGCCGGTCAACG 2309405 36 100.0 33 .................................... AGTTTTAGATTCGTGCATAAGCACCTCCAATCT 2309336 36 100.0 32 .................................... GGCACCGGGGAAGTGTTTGGTGAGTGCTTCAA 2309268 36 100.0 32 .................................... TTTTCAAATGTATCCATAGTGAACACCTCTAT 2309200 36 100.0 34 .................................... GCACTCCGATTAGTGATTACCATCCTCCACGTAT 2309130 36 100.0 35 .................................... GCATGAATCTTGAGCCAATACCAGCAGCGTCTTTC 2309059 36 100.0 26 .................................... GCCGCCGCCAGTGAGACCATTTCAGG 2308997 36 100.0 35 .................................... GTGGTTCATTGTGCTGAATACCATCGACTCGTAGA 2308926 36 100.0 32 .................................... AGTGACCAGATCGGTAATGATCCGTCATTCCT 2308858 36 100.0 32 .................................... GAATGCATCCCAGTGCATCCGGCGCTTCTCAA 2308790 36 100.0 32 .................................... ATCTTCTTGGCTTTGAAGCGACGTTCAGCCTT 2308722 36 100.0 31 .................................... TCACCTTGTTCGACTAACCCCCGAGCGTATG 2308655 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 14 36 100.0 32 GTTCCGGAACTTCCCTGACTTTGAAGGGATTAAGAC # Left flank : ATAAGAAAGACAACATATAGTAAATTCAAACCAAGTTAAATTGATTTATGGCATATTATTTATGGCTGTTTATTTAATCACCCGCCACCCCGGTGCCGTAAAATGGGCAAAGGAGACCGGTTTGTTTTTTAATCAAACCATTCAACACATTGATTTCCAACCTTTTCAACATGGCGATAAAGTGTATGGTTTGCTGCCTGTTCATTTAGCCGCCAGAGTGTGCGACCTTGGTGCTGAATACTGGCATCTTTGTATTGATGTTCCTGAACACAAGCGTGGTCAGGAATTAACCCTTCAGGAAATGGAACGCTTTAATGCCCGATTTGAACGGTTTCATGTTACGTTAAGTCAATAGCTGTTGTAGGATAAGCCAAAACCGGCACCCCGCCACCAGGAGCAAAAAACCTATGAAAAACCGCCCTTTTTTGCTGTACATAAAAACAGTAGTGGGCAGCCCCCTTTGCAACCCCATGAATTTAAAGTACTATTTTGACGGTGGA # Right flank : GTTCTGCCAAAGGCTATTTGTACTTTTTCCATGTTCCGGAACGCTCCCGTTTCACAAGTTTGTCTGACACCACTCCCGCCATTGGCACACATATACTCAGATTCAAATCATGATCAGGAGTGTAATACCAATGGCCGACATACCTGTGCTTATCGGTTACGACATTAAAGACCCAAAAACGAGAAATAAAGCTCTGTACCGGCTGCGTAAGATTTGCGACAGCCGTCAGAAGTCTGTATTTGAATGCTGGGTTGATGAACAACAACTTGGGGACATTTACTGGCAGCTTACGCCGCTTATGTCCGACAGTGACACGTTATTCTGGATGCCTGTCAGCCGTTCACGTCAGATCATCAGGCTGGGTCAGTCAGAATCTTTACTGTTTTCAGATTTTCTGCTGGTTGCATGATATGGCGCATCTGATCATTAACGACAGGGTTAAATCGCTGGAATGTCAGGCGCAGGCACTTTTGATTCGTCAGGAAAACAAACCGCCTCTG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGAACTTCCCTGACTTTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 2341528-2340879 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013251.1 Endozoicomonas montiporae CL-33 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 2341527 36 100.0 32 .................................... TAACTATTCAACTGAATGCAGTTCATCATTTC 2341459 36 100.0 34 .................................... TGTATGCCTTGAGATAACTGGACAAACTTTCAGA 2341389 36 97.2 34 ...................C................ CTTATGCCCACCTTCTCCAAGGGTGTTGGCATTA 2341319 36 100.0 30 .................................... TTGTTTAGAGCCGAGCATCTTCAGCTCATT 2341253 36 100.0 31 .................................... AATGATAAGTCCGCCATTCTGGTAACCTTTC 2341186 36 100.0 33 .................................... GTTCCAGCTATGACGGCTTCAATGCGCTCTTGA 2341117 36 100.0 33 .................................... GAGTTTTGTTTTTTGAATAAGACAGGAGGCGAT 2341048 36 100.0 30 .................................... TTGTTTAGAGCCGAGCATCTTCAGCTCATT 2340982 36 100.0 32 .................................... TTAAATTGCTTTTTGATGTCGTTTTTAGCTGT 2340914 35 83.3 0 .........................ACA..-...TA | A [2340891] ========== ====== ====== ====== ==================================== ================================== ================== 10 36 98.0 32 GTTCCGGAACTGCCCTGACTTTGAAGGGATTAAGAC # Left flank : GACTGTCAGCCAGTGACAAAAAGCGTGAAACCCATCTGGAATTTATCCGGGCAAAAAGAAAACACTCAGCCGTGGAGTCGGATATAAATGCATTGGAATCCAACGGCCTCGATAAGTGTCCGGATAAAGGCATTGAGGGCTTTAAGCGATACGTTGCACTGGCTGTTGTTGCCGGCAATCTGAAACGGTTGGGCAAACTTCTTCTGACCAGAGATCGTCAATAGCTTTTCAGCCAGCTACCGGTCAGTTTTTGTTTTATCATGCCTGGCATGAGGGTTTTGCACGCTTCAGAAGTGGCATTTTTGCTTTTACTTCACGCTGCTGAGTACAAAAAATAGCCTCTACTTGCCATAACAGTAGAATTCAGCTGCGATGGGTGCATGACAGCCAGAATTCGCTGCGAATTTTCTGAGGTTTTCTGACAGGCACTATGTATTTATACAGTGTTTGCTAACCCCCTTTGCAAGCCTATGAATCTAAAGTACTATTTGGGCTCTGGG # Right flank : ATCCACCTGCTTTCACAAAAGACTTAACTTTAGCCCTCCGCCTAAAGAGGTCAGCAGCCTGTAACAATTCATCTAAAAAGCTTTTTTCTATCTGTCCCTCGTTAAAAATGGATCTAAAAAATGAAAAAGATATTCATCACAATCTCTACAATAGCAGCTGTTCTGGTATCCGGATGCAGCCGTGACGCACAAATCGCATCGAGTAACCTTTCCAGAAAAGCCGATATGTTTGAGCTGAACCGGCGCATCGTTTTCTACAATGGAATTACGGATACTTATATGCTCACCGTTGAGGGACGATGCTCAATCAAAGCAGATACTGATGGTAAGAAACTTGATGTCACCTGCAAAACTGGCGAGAATTCGTTCAAGAAACATTTTCTTGGTCTGTCGGATAATGTTACTTACTTTGCAGAACAGCTTGAGTCAGTGGATGTGAGTACCTATCACTACAAGGTTAACTTTAAACCACAATCTATTCTTCCTGACGTAGATTTAGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGAACTGCCCTGACTTTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 4 2345970-2345730 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013251.1 Endozoicomonas montiporae CL-33 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 2345969 36 100.0 33 .................................... CTGGAGCAACGCCCTGACCAATCAGGTAATGAC 2345900 36 100.0 31 .................................... TCTTTCAATTCGCTTTCGCGCTTTGAGATAA 2345833 36 100.0 32 .................................... GTTCTTGCTAACTCATAAACATTCTTGTTATG 2345765 36 91.7 0 .............................C...C.A | ========== ====== ====== ====== ==================================== ================================= ================== 4 36 97.9 32 GTTCCGGAACTGCCCTGACTTTGAAGGGATTAAGAC # Left flank : TATCACTGAACAGCAGAGATTCTGCCTGCCCCAGACGAATAACCGAACGGCTACGGCTGACAGGCAAACAAAAAAAGGAATCACCTTCATCAATTAACGGCAGCAATTGTTCATACAGTTCAGTCAGCTCAGCTTCTGTGAACCAGCATTCGAATACCGATTTTTGACGACCGTCGCATAATTTGCGCAAACGATAGAGTGCCCGGTTTCTGTTTTTGTTATTACTGATGTCATAACAAACAATCCATGGTTTGGCAGACATGACGATGACTCCCGTGTTGACCGGATACAGTCTAATGAAATGCAACCCATTTTGTACTCAGACAAGCTTGTGAAATAATAGAAATAGCTCTCAAAACAAATATCAATGACTTACAGGACCCCTTAGCAGAAGACACCCAAAAACCATGAAAAAAGGCTGTTTTTCACTATGTATTTATACAGTGTTTGCTAACCCCCTTTGCAAGCCTATGAATCTAAAGTACTATTTGGGCTCTGGG # Right flank : AAAAAGCAGGCTCCCCCTCTCCAGAGAAACCTGCTTTGATCAATCAGACAACAAAGGATCTGGCAAAACAGCCTTGCTGGTCAACGTCTAAAAATCAGCTTTCTGCGGCTGCTTTCTCCGGTAAGTGTTCCAACTCCAAATGGGCGCGGTCTACCAGCTCGTCCGGCAGCTCTTTTCTGACCGATACTCCTAAATCCCTGAATTCTGAAGCCTGCTTAATCAGATTCCCTTTACCGGTATACAGCTGCCCAAACGCCTTGAGATAACTGTCTTTGGCTTTATCCAGTTGATTGCCAACCGCCTGCATACTGGTTAAAAAACCATTCAATTTGTTGTAAAACCGCTCTGCCCTGCTGGCGAGCTCTGCCGTGTGTTTATTCTGCTCTTCAAAACGCCACAGCTGTCGTACAATATTCAGACTGGTCAGCAAAGTGGTTGGTGTCGCAACCAGCACATTCTGCTCAATCGCTCGCTGATACAGTGAATCATCGTATTTCAAC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGAACTGCCCTGACTTTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 5 4218633-4221284 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013251.1 Endozoicomonas montiporae CL-33 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4218633 29 100.0 32 ............................. TCGTTGTTGAGAATGCGCCAGAAGGAACGACA 4218694 29 100.0 32 ............................. AGTTCGAGACAGGCGGCAAGCAGAAAATACCC 4218755 29 100.0 32 ............................. TGCGGGGCTTTTTTTATGCCTGTAGGAAACTA 4218816 29 100.0 32 ............................. CGAAGCCTTCCAGTAGTTTTTCAGGAGATAGA 4218877 29 100.0 32 ............................. CTGGGATTCCTGGTCTTTAGTTAGATGAATCA 4218938 29 100.0 32 ............................. CAGCAGACGACAGGCGCAGAATTGCAGAGGCA 4218999 29 100.0 32 ............................. AGCTTATCGAGTCCCGGATTGTTGATGTTGAT 4219060 29 100.0 32 ............................. AACGGCAGTCCAGCATGTAGCCAGTACTACAC 4219121 29 100.0 32 ............................. AACGTGCTTACAGCAACAGCCTGTCAGGGACG 4219182 29 100.0 32 ............................. CCTCTTCATTCTCAATGGATGCTGCTTCTGGC 4219243 29 100.0 32 ............................. GGCAGTAACTCACTACCTTTCATTGATTCTGT 4219304 29 100.0 32 ............................. GCTTTTGCCTGACCACTGGGAGATACGAGCCA 4219365 29 100.0 32 ............................. GACTATGCAGCCGTGATTATCGGCAGCAAAGC 4219426 29 100.0 32 ............................. CTGGCACCATTGATCCGGACAGAACAGACGAG 4219487 29 100.0 32 ............................. TCTACCGAAAGATGAGCAATTGCGGATGTCTA 4219548 29 100.0 32 ............................. CCCTGAAGAAGTGGCTTCTATCATTTCGGCTC 4219609 29 100.0 32 ............................. GTAAGAGTACCAATTTATCAATTCATTCGGCA 4219670 29 100.0 32 ............................. GAAAAAATCGTACGCTAAGGTACAGTCGTACA 4219731 29 100.0 32 ............................. TGGGGCCGCTATCGTGAAGCCGAACTGGTTGT 4219792 29 100.0 32 ............................. CCAAGAGCAAGAATCACCCGTGAAGCCAGAAA 4219853 29 100.0 32 ............................. TTATGAGGACGAAGGGAATGGTTGGTTCAGGC 4219914 29 100.0 32 ............................. CTCTTTCGTCAACATGGAATGAAATTAATAAC 4219975 29 100.0 32 ............................. GTTACATTGCTGACCCGCAGCATCAGCAGCCA 4220036 29 100.0 32 ............................. CAGCAGAAGAGCTGATGATGGGAACGCTTGCC 4220097 29 100.0 32 ............................. CCCTTTCTTCTGCGCTCAATGTTGGACACGTA 4220158 29 100.0 32 ............................. AGGACAGCGGATCTCTGGGCTGATGCCAACCG 4220219 29 100.0 32 ............................. CCGGATCAGTCCGGCATTATTAGCGGAGCAGC 4220280 29 100.0 32 ............................. TGCCTGGTTACTAACGGTTTTATATAGATTGC 4220341 29 100.0 32 ............................. AACTAACGACAGCCCACGTCAAAACCATTGCT 4220402 29 100.0 32 ............................. TGGCGTGTATGGCTGGAGCGCACATTGTCACG 4220463 29 100.0 32 ............................. GGTTTTTTAATTACTTTTCAGACTCTCTATTT 4220524 29 100.0 32 ............................. GGCTAGCACTACCAAAACAAGAATAAAAAGGA 4220585 29 100.0 32 ............................. CGGGAACAGGTGTATCAGGAAGGCATGTTCCT 4220646 29 100.0 32 ............................. TGATGTCCCACATGTAGCAGGAATTGTTAGCC 4220707 29 100.0 32 ............................. TCACCAAGCGACTCCTGTGTATTTCCTCCGGA 4220768 29 100.0 32 ............................. ACTTTTAAATCAGCTTTAGATTCAGGGTCGTC 4220829 29 100.0 32 ............................. CAAATTGCGGAAATAGAATACAGGTGTATGGC 4220890 29 100.0 32 ............................. GTCGAGGTGATCAATGATCGCAACGGTAACGT 4220951 29 100.0 32 ............................. CCCTTGATATATCTGTCAAAACGGTTACCCGG 4221012 29 100.0 32 ............................. CGATCAACAAGGAAAAATACGAGCAGGATGAA 4221073 29 96.6 32 ...C......................... AGTAGAGGTTACATATACGCCTGCTCCTGACA 4221134 29 100.0 32 ............................. ATCAATGACGATAACTTGCCTAATTGCAGGCA 4221195 29 100.0 32 ............................. CTAACCCTAATATGGGCGTGTCTGTTTATAGG 4221256 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.8 32 CTGTCTCCCACGACCGTGGGGATGAACCG # Left flank : CCTTAGCCTTAGAGCATACTTTGCCCAAGCGGGAGTCGAGCAGGCATATGGCTGGTAGAGACCTGGGAGAACAAAAGGCAACTGACTCACTCAAAGCACACGCCCGGAAGTTTAAACTTTTAGATGCAGCTTAGAATCGAGATAAATACGTTACTTGTTTAGGTAAAACTGCAGCATCGAGTATTAGAAATCAGAGCAGGTGTTTATGTAGGAAGCGTGACACGACGAATCAGGGAAATGATCTGGGAGCAAATCGTCGGGCTGGCTGAAGATGGCAACGTAGCGATTGCCTGGGCCACCAACACAGAGTCCGGTTTTGACTTCCAAACCTATGGTAATAACCGGCGTATTCCGATCGATGAAGACGGCTTACGTTTAGTACTTTTTCAACCTGATACCTGAATAAATCAGTAGCTCTTTAACAATAAGCTTTTACTCTAAATGTCTGGTAAGATTTACAGTGCTGTTAACCAATTGATACGCAAGTCTATTTTTTTAGA # Right flank : AGTTGCAATAGCTTTGCCCACATTTCTCGACCGAAAGACCTCGATCAATTGGTAAGGGAGAACATTGCACAATTCTCTGAAGTTCATTTATTCTTTCATTGATCCACTCATTCAATGAGCACGTAACAAGATCCGTATCCCGAATTTTTACCTGACTTCCGGACGGAACCTAATGAAAGACCATGGACTCAACATTGCAGTGATCGGCTCAGGCATCAGTGGCTTGTCCGCTGCCTGGCTGCTGTCCCGACAGCACAATGTGACACTGTTCGAAAAAGACGACCGGTTCGGTGGTCACAGTCACACCGTCAATGTTGAGGATAATAACCAGAATATCCCTGTGGACACCGGCTTTATTGTTTTCAATGAAGCCACCTACCCAAACCTGACCGCATTCTTTGACCATCTTAATGTAGATGTTACAGACACCGATATGTCCTTTGCCGTATCCATGAACAATGGCCGGATTGAATACTCGGGTACTGATATAAACGGTTTGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTCTCCCACGACCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.30,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //