Array 1 1862-2049 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGEMP010000067.1 Burkholderia cenocepacia strain 2CH1 NODE_33_length_91324_cov_62.028883, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 1862 38 100.0 37 ...................................... GGCCTCGCTGTCCACGTCGACCTCGACCGCGATCAAC 1937 38 94.7 37 ...........G.....C.................... CAACTCGCTGTCGACGTCGACTTCGACCGGCATCGGT 2012 38 97.4 0 ........C............................. | ========== ====== ====== ====== ====================================== ===================================== ================== 3 38 97.4 38 TCGCTGTCGACCGGCCTGAGCACGACGAACAGCAACGT # Left flank : ACGGCGCGGTGTCCCTCGGCAACCAGAACACGGCAACCGGCGCCAGCGCGCTCGCCCTCGGCAGCTCGAACCAGGCCACCGCGGACAACACGATCGCGCTGGGCAGCCAGGCCACGGCCAGCGCCACCGGCGCACAGGCCTACGGCTCGGCCGCCAAGGCCACGGCCGCCGACGCGCTCGCCTTCGGCACGAACGCGCAAGCGAACGTCGCGAACTCGATCGCACTCGGCGCGAACTCGGTCACGGCCGCGGCGGTCGGCACCTCGAGCGCCACGATCGGCGGCGTCACGTACCCGTTCGCGGGCGGCTCGCCGGTCGGCGTGGTGAGCGTCGGCGCACCGGGCCAGGAACGCCAGATCACGAACGTCGCCGCGGGTCGGATCTCGGCCACGAGCACGGACGCGATCAACGGCAGCCAGCTGAACGCGACGAACAACGCGATCAACACGCTGTCGACGTCCACCGCGTCGAACGTCGCATCCCTGTCGACCGGCATCAAC # Right flank : TGGCATCGCTGTCGACCGGCGTGACGAACATCAACAACCAGTTGAACCAGTTGTCGACGTCGATCAACAACAACACGACGCGTGCAGCCAACAACAACGGCATCGCGGCCGACATGAACGGCAAGGGCACCGACGTCCCGGTCGTCACCGCCGGCTCGAACTCGGTGGCGATCGGCGCGGGTTCGAACGACGGCGGTCGCTCGAACGTGGTGTCGGTCGGCAGCGACCAGCAGCAGCGGCAGATCACGAACGTCGCGCCGGGTACGCAAGGCACCGACGCGGTGAACGTGAACCAGCTGACGCAGGTGCAGACGACGCTGTCGACGGCACTGTCGGGCCAGCAGGCGCAGATCAACTCGCTGGGTTCGCAACTGCAGCAGACCGACCAGATGGCGAAGCAGGGTATCGCGGCCGTCGGCGCGATGGCGTCGATCCCGCAGCTCGATCGCGACGCCAACTTCGGGATGGGCGTGGGCACGTCGACCTTCCTCGGCCAGAAG # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCTGTCGACCGGCCTGAGCACGACGAACAGCAACGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //